PMC:1359074 / 8213-8377
Annnotations
pmc-enju-pas
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bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T1467","span":{"begin":123,"end":132},"obj":"Protein"},{"id":"T1466","span":{"begin":117,"end":121},"obj":"Protein"},{"id":"T1465","span":{"begin":88,"end":97},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":" sac blood islands, but is expressed in fetal liver, the opposite expression pattern of ɛy globin. In the absence of Sox6, ɛy globin is ectopically expressed in the"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T1276","span":{"begin":126,"end":132},"obj":"http://purl.obolibrary.org/obo/GO_0005344"},{"id":"T1275","span":{"begin":91,"end":97},"obj":"http://purl.obolibrary.org/obo/GO_0005344"}],"text":" sac blood islands, but is expressed in fetal liver, the opposite expression pattern of ɛy globin. In the absence of Sox6, ɛy globin is ectopically expressed in the"}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T1482","span":{"begin":126,"end":132},"obj":"http://purl.obolibrary.org/obo/GO_0005344"},{"id":"T1481","span":{"begin":91,"end":97},"obj":"http://purl.obolibrary.org/obo/GO_0005344"}],"text":" sac blood islands, but is expressed in fetal liver, the opposite expression pattern of ɛy globin. In the absence of Sox6, ɛy globin is ectopically expressed in the"}
simple1
{"project":"simple1","denotations":[{"id":"T1694","span":{"begin":123,"end":132},"obj":"Protein"},{"id":"T1693","span":{"begin":117,"end":121},"obj":"Protein"},{"id":"T1692","span":{"begin":88,"end":97},"obj":"Protein"}],"text":" sac blood islands, but is expressed in fetal liver, the opposite expression pattern of ɛy globin. In the absence of Sox6, ɛy globin is ectopically expressed in the"}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T4299","span":{"begin":148,"end":157},"obj":"Gene_expression"},{"id":"T4298","span":{"begin":106,"end":113},"obj":"Negative_regulation"},{"id":"T4297","span":{"begin":66,"end":76},"obj":"Gene_expression"},{"id":"T4295","span":{"begin":27,"end":36},"obj":"Gene_expression"},{"id":"T4272","span":{"begin":123,"end":132},"obj":"Protein"},{"id":"T4271","span":{"begin":117,"end":121},"obj":"Protein"},{"id":"T4270","span":{"begin":88,"end":97},"obj":"Protein"}],"relations":[{"id":"R3054","pred":"themeOf","subj":"T4270","obj":"T4295"},{"id":"R3055","pred":"themeOf","subj":"T4270","obj":"T4297"},{"id":"R3056","pred":"themeOf","subj":"T4271","obj":"T4298"},{"id":"R3057","pred":"themeOf","subj":"T4272","obj":"T4299"},{"id":"R3058","pred":"themeOf","subj":"T4272","obj":"T4298"}],"text":" sac blood islands, but is expressed in fetal liver, the opposite expression pattern of ɛy globin. In the absence of Sox6, ɛy globin is ectopically expressed in the"}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T2760","span":{"begin":66,"end":76},"obj":"Gene_expression"},{"id":"T2759","span":{"begin":27,"end":36},"obj":"Gene_expression"},{"id":"T2736","span":{"begin":123,"end":132},"obj":"Protein"},{"id":"T2735","span":{"begin":117,"end":121},"obj":"Protein"},{"id":"T2734","span":{"begin":88,"end":97},"obj":"Protein"},{"id":"T2761","span":{"begin":106,"end":113},"obj":"Negative_regulation"}],"relations":[{"id":"R1845","pred":"themeOf","subj":"T2734","obj":"T2760"},{"id":"R1847","pred":"themeOf","subj":"T2735","obj":"T2761"}],"text":" sac blood islands, but is expressed in fetal liver, the opposite expression pattern of ɛy globin. In the absence of Sox6, ɛy globin is ectopically expressed in the"}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T2844","span":{"begin":106,"end":113},"obj":"Negative_regulation"},{"id":"T2843","span":{"begin":66,"end":76},"obj":"Gene_expression"},{"id":"T2842","span":{"begin":27,"end":36},"obj":"Gene_expression"},{"id":"T2814","span":{"begin":123,"end":132},"obj":"Protein"},{"id":"T2813","span":{"begin":117,"end":121},"obj":"Protein"},{"id":"T2812","span":{"begin":88,"end":97},"obj":"Protein"}],"relations":[{"id":"R1879","pred":"themeOf","subj":"T2812","obj":"T2843"},{"id":"R1880","pred":"themeOf","subj":"T2812","obj":"T2842"},{"id":"R1881","pred":"themeOf","subj":"T2814","obj":"T2844"}],"text":" sac blood islands, but is expressed in fetal liver, the opposite expression pattern of ɛy globin. In the absence of Sox6, ɛy globin is ectopically expressed in the"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T4101","span":{"begin":123,"end":132},"obj":"Protein"},{"id":"T4046","span":{"begin":88,"end":97},"obj":"Protein"},{"id":"T4178","span":{"begin":114,"end":121},"obj":"Protein"}],"text":" sac blood islands, but is expressed in fetal liver, the opposite expression pattern of ɛy globin. In the absence of Sox6, ɛy globin is ectopically expressed in the"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T3930","span":{"begin":161,"end":164},"obj":"DT"},{"id":"T3929","span":{"begin":158,"end":160},"obj":"IN"},{"id":"T3928","span":{"begin":148,"end":157},"obj":"VBN"},{"id":"T3927","span":{"begin":136,"end":147},"obj":"RB"},{"id":"T3926","span":{"begin":133,"end":135},"obj":"VBZ"},{"id":"T3925","span":{"begin":126,"end":132},"obj":"NN"},{"id":"T3924","span":{"begin":123,"end":125},"obj":"JJ"},{"id":"T3923","span":{"begin":121,"end":122},"obj":","},{"id":"T3922","span":{"begin":117,"end":121},"obj":"NNP"},{"id":"T3921","span":{"begin":114,"end":116},"obj":"IN"},{"id":"T3920","span":{"begin":106,"end":113},"obj":"NN"},{"id":"T3919","span":{"begin":102,"end":105},"obj":"DT"},{"id":"T3918","span":{"begin":99,"end":101},"obj":"IN"},{"id":"T3917","span":{"begin":97,"end":98},"obj":"."},{"id":"T3916","span":{"begin":91,"end":97},"obj":"NN"},{"id":"T3915","span":{"begin":88,"end":90},"obj":"JJ"},{"id":"T3914","span":{"begin":85,"end":87},"obj":"IN"},{"id":"T3913","span":{"begin":77,"end":84},"obj":"NN"},{"id":"T3912","span":{"begin":66,"end":76},"obj":"NN"},{"id":"T3911","span":{"begin":57,"end":65},"obj":"JJ"},{"id":"T3910","span":{"begin":53,"end":56},"obj":"DT"},{"id":"T3909","span":{"begin":51,"end":52},"obj":","},{"id":"T3908","span":{"begin":46,"end":51},"obj":"NN"},{"id":"T3907","span":{"begin":40,"end":45},"obj":"JJ"},{"id":"T3906","span":{"begin":37,"end":39},"obj":"IN"},{"id":"T3905","span":{"begin":27,"end":36},"obj":"VBN"},{"id":"T3904","span":{"begin":24,"end":26},"obj":"VBZ"},{"id":"T3903","span":{"begin":20,"end":23},"obj":"CC"},{"id":"T3902","span":{"begin":18,"end":19},"obj":","},{"id":"T3901","span":{"begin":11,"end":18},"obj":"NNS"},{"id":"T3900","span":{"begin":5,"end":10},"obj":"NN"},{"id":"T3899","span":{"begin":1,"end":4},"obj":"NN"}],"relations":[{"id":"R2866","pred":"compound","subj":"T3899","obj":"T3901"},{"id":"R2867","pred":"compound","subj":"T3900","obj":"T3901"},{"id":"R2872","pred":"auxpass","subj":"T3904","obj":"T3905"},{"id":"R2874","pred":"prep","subj":"T3906","obj":"T3905"},{"id":"R2876","pred":"amod","subj":"T3907","obj":"T3908"},{"id":"R2877","pred":"pobj","subj":"T3908","obj":"T3906"},{"id":"R2879","pred":"punct","subj":"T3909","obj":"T3905"},{"id":"R2880","pred":"det","subj":"T3910","obj":"T3913"},{"id":"R2882","pred":"amod","subj":"T3911","obj":"T3913"},{"id":"R2883","pred":"compound","subj":"T3912","obj":"T3913"},{"id":"R2884","pred":"conj","subj":"T3913","obj":"T3905"},{"id":"R2886","pred":"prep","subj":"T3914","obj":"T3913"},{"id":"R2887","pred":"amod","subj":"T3915","obj":"T3916"},{"id":"R2889","pred":"pobj","subj":"T3916","obj":"T3914"},{"id":"R2891","pred":"prep","subj":"T3918","obj":"T3928"},{"id":"R2893","pred":"det","subj":"T3919","obj":"T3920"},{"id":"R2894","pred":"pobj","subj":"T3920","obj":"T3918"},{"id":"R2895","pred":"prep","subj":"T3921","obj":"T3920"},{"id":"R2897","pred":"pobj","subj":"T3922","obj":"T3921"},{"id":"R2898","pred":"punct","subj":"T3923","obj":"T3928"},{"id":"R2899","pred":"amod","subj":"T3924","obj":"T3925"},{"id":"R2901","pred":"nsubjpass","subj":"T3925","obj":"T3928"},{"id":"R2902","pred":"auxpass","subj":"T3926","obj":"T3928"},{"id":"R2904","pred":"advmod","subj":"T3927","obj":"T3928"},{"id":"R2905","pred":"ROOT","subj":"T3928","obj":"T3928"},{"id":"R2906","pred":"prep","subj":"T3929","obj":"T3928"}],"text":" sac blood islands, but is expressed in fetal liver, the opposite expression pattern of ɛy globin. In the absence of Sox6, ɛy globin is ectopically expressed in the"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T1587","span":{"begin":106,"end":113},"obj":"Negative_regulation"},{"id":"T1585","span":{"begin":123,"end":132},"obj":"Protein"},{"id":"T1584","span":{"begin":117,"end":121},"obj":"Protein"},{"id":"T1583","span":{"begin":66,"end":76},"obj":"Gene_expression"},{"id":"T1582","span":{"begin":27,"end":36},"obj":"Gene_expression"},{"id":"T1581","span":{"begin":27,"end":36},"obj":"Gene_expression"},{"id":"T1579","span":{"begin":88,"end":97},"obj":"Protein"}],"relations":[{"id":"R797","pred":"themeOf","subj":"T1579","obj":"T1582"},{"id":"R798","pred":"themeOf","subj":"T1579","obj":"T1583"},{"id":"R799","pred":"themeOf","subj":"T1585","obj":"T1587"}],"text":" sac blood islands, but is expressed in fetal liver, the opposite expression pattern of ɛy globin. In the absence of Sox6, ɛy globin is ectopically expressed in the"}
testone
{"project":"testone","denotations":[{"id":"T1065","span":{"begin":148,"end":157},"obj":"Gene_expression"},{"id":"T1064","span":{"begin":106,"end":113},"obj":"Negative_regulation"},{"id":"T1063","span":{"begin":66,"end":76},"obj":"Gene_expression"},{"id":"T1062","span":{"begin":27,"end":36},"obj":"Gene_expression"},{"id":"T1030","span":{"begin":123,"end":132},"obj":"Protein"},{"id":"T1029","span":{"begin":117,"end":121},"obj":"Protein"},{"id":"T1028","span":{"begin":88,"end":97},"obj":"Protein"}],"relations":[{"id":"R629","pred":"themeOf","subj":"T1028","obj":"T1063"},{"id":"R630","pred":"themeOf","subj":"T1029","obj":"T1064"},{"id":"R631","pred":"themeOf","subj":"T1029","obj":"T1065"},{"id":"R632","pred":"themeOf","subj":"T1030","obj":"T1065"},{"id":"R633","pred":"themeOf","subj":"T1030","obj":"T1064"}],"text":" sac blood islands, but is expressed in fetal liver, the opposite expression pattern of ɛy globin. In the absence of Sox6, ɛy globin is ectopically expressed in the"}
test3
{"project":"test3","denotations":[{"id":"T1118","span":{"begin":123,"end":132},"obj":"Protein"},{"id":"T1117","span":{"begin":117,"end":121},"obj":"Protein"},{"id":"T1116","span":{"begin":88,"end":97},"obj":"Protein"},{"id":"T1194","span":{"begin":148,"end":157},"obj":"Gene_expression"},{"id":"T1193","span":{"begin":123,"end":132},"obj":"Protein"},{"id":"T1192","span":{"begin":117,"end":121},"obj":"Protein"},{"id":"T1191","span":{"begin":88,"end":97},"obj":"Protein"}],"relations":[{"id":"R670","pred":"themeOf","subj":"T1192","obj":"T1194"},{"id":"R671","pred":"themeOf","subj":"T1193","obj":"T1194"}],"text":" sac blood islands, but is expressed in fetal liver, the opposite expression pattern of ɛy globin. In the absence of Sox6, ɛy globin is ectopically expressed in the"}