PMC:1359074 / 8065-8159
Annnotations
pmc-enju-pas
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bionlp-st-ge-2016-coref
{"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T1414","span":{"begin":52,"end":61},"obj":"Antecedent"},{"id":"T1413","span":{"begin":76,"end":79},"obj":"Anaphor"}],"relations":[{"id":"R752","pred":"boundBy","subj":"T1413","obj":"T1414"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"We show that Sox6 binds to the proximal promoter of ɛy globin and represses its transcription."}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T1463","span":{"begin":52,"end":61},"obj":"Protein"},{"id":"T1462","span":{"begin":13,"end":17},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"We show that Sox6 binds to the proximal promoter of ɛy globin and represses its transcription."}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T1274","span":{"begin":55,"end":61},"obj":"http://purl.obolibrary.org/obo/GO_0005344"},{"id":"T1242","span":{"begin":80,"end":93},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"We show that Sox6 binds to the proximal promoter of ɛy globin and represses its transcription."}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T1480","span":{"begin":55,"end":61},"obj":"http://purl.obolibrary.org/obo/GO_0005344"}],"text":"We show that Sox6 binds to the proximal promoter of ɛy globin and represses its transcription."}
sentences
{"project":"sentences","denotations":[{"id":"T1232","span":{"begin":0,"end":94},"obj":"Sentence"},{"id":"T52","span":{"begin":0,"end":94},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"We show that Sox6 binds to the proximal promoter of ɛy globin and represses its transcription."}
simple1
{"project":"simple1","denotations":[{"id":"T1690","span":{"begin":52,"end":61},"obj":"Protein"},{"id":"T1689","span":{"begin":13,"end":17},"obj":"Protein"}],"text":"We show that Sox6 binds to the proximal promoter of ɛy globin and represses its transcription."}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T4294","span":{"begin":18,"end":23},"obj":"Binding"},{"id":"T4268","span":{"begin":52,"end":61},"obj":"Protein"},{"id":"T4267","span":{"begin":13,"end":17},"obj":"Protein"}],"relations":[{"id":"R3050","pred":"themeOf","subj":"T4267","obj":"T4294"},{"id":"R3051","pred":"themeOf","subj":"T4268","obj":"T4294"}],"text":"We show that Sox6 binds to the proximal promoter of ɛy globin and represses its transcription."}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T2757","span":{"begin":18,"end":23},"obj":"Binding"},{"id":"T2732","span":{"begin":52,"end":61},"obj":"Protein"},{"id":"T2731","span":{"begin":13,"end":17},"obj":"Protein"}],"relations":[{"id":"R1837","pred":"themeOf","subj":"T2731","obj":"T2757"},{"id":"R1841","pred":"themeOf","subj":"T2732","obj":"T2757"}],"text":"We show that Sox6 binds to the proximal promoter of ɛy globin and represses its transcription."}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T2840","span":{"begin":66,"end":75},"obj":"Negative_regulation"},{"id":"T2839","span":{"begin":80,"end":93},"obj":"Transcription"},{"id":"T2838","span":{"begin":18,"end":23},"obj":"Binding"},{"id":"T2810","span":{"begin":52,"end":61},"obj":"Protein"},{"id":"T2809","span":{"begin":13,"end":17},"obj":"Protein"}],"relations":[{"id":"R1872","pred":"themeOf","subj":"T2809","obj":"T2838"},{"id":"R1873","pred":"causeOf","subj":"T2809","obj":"T2840"},{"id":"R1874","pred":"themeOf","subj":"T2810","obj":"T2838"},{"id":"R1875","pred":"themeOf","subj":"T2810","obj":"T2839"},{"id":"R1890","pred":"themeOf","subj":"T2839","obj":"T2840"}],"text":"We show that Sox6 binds to the proximal promoter of ɛy globin and represses its transcription."}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T4076","span":{"begin":52,"end":61},"obj":"Protein"},{"id":"T4071","span":{"begin":24,"end":61},"obj":"Entity"},{"id":"T4207","span":{"begin":13,"end":61},"obj":"Binding"},{"id":"T4194","span":{"begin":13,"end":93},"obj":"Negative_regulation"},{"id":"T4151","span":{"begin":13,"end":17},"obj":"Protein"}],"relations":[{"id":"R3002","pred":"themeOf","subj":"T4071","obj":"T4207"},{"id":"R3019","pred":"themeOf","subj":"T4151","obj":"T4207"},{"id":"R3018","pred":"causeOf","subj":"T4151","obj":"T4194"}],"text":"We show that Sox6 binds to the proximal promoter of ɛy globin and represses its transcription."}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T3885","span":{"begin":93,"end":94},"obj":"."},{"id":"T3884","span":{"begin":80,"end":93},"obj":"NN"},{"id":"T3883","span":{"begin":76,"end":79},"obj":"PRP$"},{"id":"T3882","span":{"begin":66,"end":75},"obj":"VBZ"},{"id":"T3881","span":{"begin":62,"end":65},"obj":"CC"},{"id":"T3880","span":{"begin":55,"end":61},"obj":"NN"},{"id":"T3879","span":{"begin":52,"end":54},"obj":"JJ"},{"id":"T3878","span":{"begin":49,"end":51},"obj":"IN"},{"id":"T3877","span":{"begin":40,"end":48},"obj":"NN"},{"id":"T3876","span":{"begin":31,"end":39},"obj":"JJ"},{"id":"T3875","span":{"begin":27,"end":30},"obj":"DT"},{"id":"T3874","span":{"begin":24,"end":26},"obj":"TO"},{"id":"T3873","span":{"begin":18,"end":23},"obj":"NNS"},{"id":"T3872","span":{"begin":13,"end":17},"obj":"JJ"},{"id":"T3871","span":{"begin":8,"end":12},"obj":"IN"},{"id":"T3870","span":{"begin":3,"end":7},"obj":"VBP"},{"id":"T3869","span":{"begin":0,"end":2},"obj":"PRP"}],"relations":[{"id":"R2822","pred":"nsubj","subj":"T3869","obj":"T3870"},{"id":"R2824","pred":"ROOT","subj":"T3870","obj":"T3870"},{"id":"R2825","pred":"mark","subj":"T3871","obj":"T3882"},{"id":"R2826","pred":"amod","subj":"T3872","obj":"T3873"},{"id":"R2828","pred":"nsubj","subj":"T3873","obj":"T3882"},{"id":"R2829","pred":"prep","subj":"T3874","obj":"T3873"},{"id":"R2830","pred":"det","subj":"T3875","obj":"T3877"},{"id":"R2832","pred":"amod","subj":"T3876","obj":"T3877"},{"id":"R2833","pred":"pobj","subj":"T3877","obj":"T3874"},{"id":"R2834","pred":"prep","subj":"T3878","obj":"T3877"},{"id":"R2836","pred":"amod","subj":"T3879","obj":"T3880"},{"id":"R2837","pred":"pobj","subj":"T3880","obj":"T3878"},{"id":"R2838","pred":"cc","subj":"T3881","obj":"T3877"},{"id":"R2840","pred":"ccomp","subj":"T3882","obj":"T3870"},{"id":"R2841","pred":"poss","subj":"T3883","obj":"T3884"},{"id":"R2842","pred":"dobj","subj":"T3884","obj":"T3882"},{"id":"R2844","pred":"punct","subj":"T3885","obj":"T3870"}],"text":"We show that Sox6 binds to the proximal promoter of ɛy globin and represses its transcription."}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T1577","span":{"begin":66,"end":75},"obj":"Negative_regulation"},{"id":"T1576","span":{"begin":18,"end":23},"obj":"Binding"},{"id":"T1575","span":{"begin":18,"end":23},"obj":"Binding"},{"id":"T1574","span":{"begin":80,"end":93},"obj":"Transcription"},{"id":"T1573","span":{"begin":40,"end":48},"obj":"Entity"},{"id":"T1572","span":{"begin":52,"end":61},"obj":"Protein"},{"id":"T1571","span":{"begin":13,"end":17},"obj":"Protein"}],"relations":[{"id":"R786","pred":"themeOf","subj":"T1571","obj":"T1575"},{"id":"R787","pred":"themeOf","subj":"T1571","obj":"T1576"},{"id":"R788","pred":"causeOf","subj":"T1571","obj":"T1577"},{"id":"R789","pred":"themeOf","subj":"T1572","obj":"T1574"},{"id":"R790","pred":"themeOf","subj":"T1572","obj":"T1576"},{"id":"R791","pred":"partOf","subj":"T1572","obj":"T1573"},{"id":"R792","pred":"Site","subj":"T1573","obj":"T1575"},{"id":"R793","pred":"Site","subj":"T1573","obj":"T1576"},{"id":"R794","pred":"themeOf","subj":"T1574","obj":"T1577"}],"text":"We show that Sox6 binds to the proximal promoter of ɛy globin and represses its transcription."}
testone
{"project":"testone","denotations":[{"id":"T1060","span":{"begin":66,"end":75},"obj":"Negative_regulation"},{"id":"T1059","span":{"begin":40,"end":48},"obj":"Entity"},{"id":"T1058","span":{"begin":31,"end":39},"obj":"Entity"},{"id":"T1057","span":{"begin":18,"end":23},"obj":"Binding"},{"id":"T1026","span":{"begin":52,"end":61},"obj":"Protein"},{"id":"T1025","span":{"begin":13,"end":17},"obj":"Protein"}],"relations":[{"id":"R624","pred":"themeOf","subj":"T1025","obj":"T1057"},{"id":"R625","pred":"themeOf","subj":"T1026","obj":"T1057"},{"id":"R637","pred":"causeOf","subj":"T1057","obj":"T1060"},{"id":"R638","pred":"themeOf","subj":"T1059","obj":"T1057"}],"text":"We show that Sox6 binds to the proximal promoter of ɛy globin and represses its transcription."}
test3
{"project":"test3","denotations":[{"id":"T1114","span":{"begin":52,"end":61},"obj":"Protein"},{"id":"T1113","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T1189","span":{"begin":52,"end":61},"obj":"Protein"},{"id":"T1188","span":{"begin":40,"end":48},"obj":"Entity"},{"id":"T1187","span":{"begin":31,"end":39},"obj":"Entity"},{"id":"T1186","span":{"begin":18,"end":23},"obj":"Binding"},{"id":"T1185","span":{"begin":13,"end":17},"obj":"Protein"}],"relations":[{"id":"R668","pred":"themeOf","subj":"T1185","obj":"T1186"},{"id":"R669","pred":"themeOf","subj":"T1188","obj":"T1186"}],"text":"We show that Sox6 binds to the proximal promoter of ɛy globin and represses its transcription."}