PMC:1359074 / 786-918 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1359074","sourcedb":"PMC","sourceid":"1359074","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1359074","text":" assay (EMSA) and chromatin immunoprecipitation (ChIP) assays demonstrate that Sox6 acts as a repressor by directly binding to the ɛ","tracks":[{"project":"pmc-enju-pas","denotations":[{"id":"T392","span":{"begin":127,"end":130},"obj":"DT"},{"id":"T391","span":{"begin":124,"end":126},"obj":"TO"},{"id":"T390","span":{"begin":116,"end":123},"obj":"VB"},{"id":"T389","span":{"begin":107,"end":115},"obj":"RB"},{"id":"T388","span":{"begin":104,"end":106},"obj":"IN"},{"id":"T387","span":{"begin":94,"end":103},"obj":"NN"},{"id":"T386","span":{"begin":92,"end":93},"obj":"DT"},{"id":"T385","span":{"begin":89,"end":91},"obj":"IN"},{"id":"T384","span":{"begin":84,"end":88},"obj":"VB"},{"id":"T383","span":{"begin":79,"end":83},"obj":"NN"},{"id":"T382","span":{"begin":74,"end":78},"obj":"IN"},{"id":"T381","span":{"begin":62,"end":73},"obj":"VB"},{"id":"T380","span":{"begin":55,"end":61},"obj":"NN"},{"id":"T379","span":{"begin":53,"end":54},"obj":"-RRB-"},{"id":"T378","span":{"begin":49,"end":53},"obj":"NN"},{"id":"T377","span":{"begin":48,"end":49},"obj":"-LRB-"},{"id":"T376","span":{"begin":28,"end":47},"obj":"NN"},{"id":"T375","span":{"begin":18,"end":27},"obj":"NN"},{"id":"T374","span":{"begin":14,"end":17},"obj":"CC"},{"id":"T373","span":{"begin":12,"end":13},"obj":"-RRB-"},{"id":"T372","span":{"begin":8,"end":12},"obj":"NN"},{"id":"T371","span":{"begin":7,"end":8},"obj":"-LRB-"},{"id":"T370","span":{"begin":1,"end":6},"obj":"NN"}],"relations":[{"id":"R163","pred":"arg1Of","subj":"T370","obj":"T371"},{"id":"R164","pred":"arg1Of","subj":"T370","obj":"T374"},{"id":"R165","pred":"arg2Of","subj":"T372","obj":"T371"},{"id":"R166","pred":"arg3Of","subj":"T373","obj":"T371"},{"id":"R167","pred":"arg1Of","subj":"T374","obj":"T381"},{"id":"R168","pred":"arg2Of","subj":"T378","obj":"T377"},{"id":"R169","pred":"arg3Of","subj":"T379","obj":"T377"},{"id":"R170","pred":"arg2Of","subj":"T380","obj":"T374"},{"id":"R171","pred":"arg1Of","subj":"T380","obj":"T375"},{"id":"R172","pred":"arg1Of","subj":"T380","obj":"T376"},{"id":"R173","pred":"arg1Of","subj":"T380","obj":"T377"},{"id":"R174","pred":"arg1Of","subj":"T383","obj":"T384"},{"id":"R175","pred":"arg2Of","subj":"T384","obj":"T381"},{"id":"R176","pred":"arg1Of","subj":"T384","obj":"T382"},{"id":"R177","pred":"arg1Of","subj":"T384","obj":"T385"},{"id":"R178","pred":"arg1Of","subj":"T384","obj":"T388"},{"id":"R179","pred":"arg2Of","subj":"T387","obj":"T385"},{"id":"R180","pred":"arg1Of","subj":"T387","obj":"T386"},{"id":"R181","pred":"arg2Of","subj":"T390","obj":"T388"},{"id":"R182","pred":"arg1Of","subj":"T390","obj":"T389"},{"id":"R183","pred":"arg1Of","subj":"T390","obj":"T391"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T392","pred":"source","obj":"pmc-enju-pas"},{"subj":"T391","pred":"source","obj":"pmc-enju-pas"},{"subj":"T390","pred":"source","obj":"pmc-enju-pas"},{"subj":"T389","pred":"source","obj":"pmc-enju-pas"},{"subj":"T388","pred":"source","obj":"pmc-enju-pas"},{"subj":"T387","pred":"source","obj":"pmc-enju-pas"},{"subj":"T386","pred":"source","obj":"pmc-enju-pas"},{"subj":"T385","pred":"source","obj":"pmc-enju-pas"},{"subj":"T384","pred":"source","obj":"pmc-enju-pas"},{"subj":"T383","pred":"source","obj":"pmc-enju-pas"},{"subj":"T382","pred":"source","obj":"pmc-enju-pas"},{"subj":"T381","pred":"source","obj":"pmc-enju-pas"},{"subj":"T380","pred":"source","obj":"pmc-enju-pas"},{"subj":"T379","pred":"source","obj":"pmc-enju-pas"},{"subj":"T378","pred":"source","obj":"pmc-enju-pas"},{"subj":"T377","pred":"source","obj":"pmc-enju-pas"},{"subj":"T376","pred":"source","obj":"pmc-enju-pas"},{"subj":"T375","pred":"source","obj":"pmc-enju-pas"},{"subj":"T374","pred":"source","obj":"pmc-enju-pas"},{"subj":"T373","pred":"source","obj":"pmc-enju-pas"},{"subj":"T372","pred":"source","obj":"pmc-enju-pas"},{"subj":"T371","pred":"source","obj":"pmc-enju-pas"},{"subj":"T370","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T155","span":{"begin":79,"end":83},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T155","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T478","span":{"begin":79,"end":83},"obj":"http://www.uniprot.org/uniprot/P35712"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T478","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"GO-MF","denotations":[{"id":"T172","span":{"begin":116,"end":123},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"attributes":[{"subj":"T172","pred":"source","obj":"GO-MF"}]},{"project":"GO-CC","denotations":[{"id":"T178","span":{"begin":18,"end":27},"obj":"http://purl.obolibrary.org/obo/GO_0000785"}],"attributes":[{"subj":"T178","pred":"source","obj":"GO-CC"}]},{"project":"simple1","denotations":[{"id":"T240","span":{"begin":79,"end":83},"obj":"Protein"}],"attributes":[{"subj":"T240","pred":"source","obj":"simple1"}]},{"project":"BioNLP16_DUT","denotations":[{"id":"T885","span":{"begin":79,"end":83},"obj":"Protein"},{"id":"T899","span":{"begin":116,"end":123},"obj":"Binding"}],"relations":[{"id":"R589","pred":"themeOf","subj":"T885","obj":"T899"}],"attributes":[{"subj":"T885","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T899","pred":"source","obj":"BioNLP16_DUT"}]},{"project":"BioNLP16_Messiy","denotations":[{"id":"T493","span":{"begin":79,"end":83},"obj":"Protein"},{"id":"T509","span":{"begin":116,"end":123},"obj":"Binding"}],"relations":[{"id":"R450","pred":"themeOf","subj":"T493","obj":"T509"}],"attributes":[{"subj":"T493","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T509","pred":"source","obj":"BioNLP16_Messiy"}]},{"project":"DLUT931","denotations":[{"id":"T524","span":{"begin":79,"end":83},"obj":"Protein"},{"id":"T538","span":{"begin":116,"end":123},"obj":"Binding"}],"relations":[{"id":"R465","pred":"themeOf","subj":"T524","obj":"T538"}],"attributes":[{"subj":"T524","pred":"source","obj":"DLUT931"},{"subj":"T538","pred":"source","obj":"DLUT931"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T855","span":{"begin":18,"end":27},"obj":"Entity"},{"id":"T862","span":{"begin":79,"end":83},"obj":"Protein"}],"attributes":[{"subj":"T855","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T862","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T719","span":{"begin":124,"end":126},"obj":"TO"},{"id":"T718","span":{"begin":116,"end":123},"obj":"JJ"},{"id":"T717","span":{"begin":107,"end":115},"obj":"RB"},{"id":"T716","span":{"begin":104,"end":106},"obj":"IN"},{"id":"T715","span":{"begin":94,"end":103},"obj":"NN"},{"id":"T714","span":{"begin":92,"end":93},"obj":"DT"},{"id":"T713","span":{"begin":89,"end":91},"obj":"IN"},{"id":"T712","span":{"begin":84,"end":88},"obj":"NNS"},{"id":"T711","span":{"begin":79,"end":83},"obj":"JJ"},{"id":"T710","span":{"begin":74,"end":78},"obj":"IN"},{"id":"T709","span":{"begin":62,"end":73},"obj":"VBP"},{"id":"T708","span":{"begin":55,"end":61},"obj":"NNS"},{"id":"T707","span":{"begin":53,"end":54},"obj":"-RRB-"},{"id":"T706","span":{"begin":49,"end":53},"obj":"NNP"},{"id":"T705","span":{"begin":48,"end":49},"obj":"-LRB-"},{"id":"T704","span":{"begin":28,"end":47},"obj":"NN"},{"id":"T703","span":{"begin":18,"end":27},"obj":"NN"},{"id":"T702","span":{"begin":14,"end":17},"obj":"CC"},{"id":"T701","span":{"begin":12,"end":13},"obj":"-RRB-"},{"id":"T700","span":{"begin":8,"end":12},"obj":"NNP"},{"id":"T699","span":{"begin":7,"end":8},"obj":"-LRB-"},{"id":"T698","span":{"begin":1,"end":6},"obj":"NN"},{"id":"T720","span":{"begin":127,"end":130},"obj":"DT"}],"relations":[{"id":"R394","pred":"nmod","subj":"T698","obj":"T708"},{"id":"R395","pred":"punct","subj":"T699","obj":"T700"},{"id":"R396","pred":"appos","subj":"T700","obj":"T698"},{"id":"R397","pred":"punct","subj":"T701","obj":"T700"},{"id":"R398","pred":"cc","subj":"T702","obj":"T698"},{"id":"R399","pred":"compound","subj":"T703","obj":"T704"},{"id":"R400","pred":"conj","subj":"T704","obj":"T698"},{"id":"R401","pred":"punct","subj":"T705","obj":"T704"},{"id":"R402","pred":"appos","subj":"T706","obj":"T704"},{"id":"R403","pred":"punct","subj":"T707","obj":"T704"},{"id":"R404","pred":"nsubj","subj":"T708","obj":"T709"},{"id":"R405","pred":"ROOT","subj":"T709","obj":"T709"},{"id":"R406","pred":"mark","subj":"T710","obj":"T718"},{"id":"R407","pred":"amod","subj":"T711","obj":"T712"},{"id":"R408","pred":"nsubj","subj":"T712","obj":"T718"},{"id":"R409","pred":"prep","subj":"T713","obj":"T712"},{"id":"R410","pred":"det","subj":"T714","obj":"T715"},{"id":"R411","pred":"pobj","subj":"T715","obj":"T713"},{"id":"R412","pred":"prep","subj":"T716","obj":"T712"},{"id":"R413","pred":"advmod","subj":"T717","obj":"T718"},{"id":"R414","pred":"ccomp","subj":"T718","obj":"T709"},{"id":"R415","pred":"prep","subj":"T719","obj":"T718"}],"attributes":[{"subj":"T719","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T718","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T717","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T716","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T715","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T714","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T713","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T712","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T711","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T710","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T709","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T708","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T707","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T706","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T705","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T704","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T703","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T702","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T701","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T700","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T699","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T698","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T720","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T218","span":{"begin":116,"end":123},"obj":"Binding"},{"id":"T216","span":{"begin":79,"end":83},"obj":"Protein"}],"relations":[{"id":"R36","pred":"themeOf","subj":"T216","obj":"T218"}],"attributes":[{"subj":"T218","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T216","pred":"source","obj":"bionlp-st-ge-2016-test-tees"}]},{"project":"testone","denotations":[{"id":"T29","span":{"begin":79,"end":83},"obj":"Protein"},{"id":"T42","span":{"begin":116,"end":123},"obj":"Binding"}],"relations":[{"id":"R4","pred":"themeOf","subj":"T29","obj":"T42"}],"attributes":[{"subj":"T29","pred":"source","obj":"testone"},{"subj":"T42","pred":"source","obj":"testone"}]},{"project":"test3","denotations":[{"id":"T54","span":{"begin":79,"end":83},"obj":"Protein"},{"id":"T75","span":{"begin":79,"end":83},"obj":"Protein"},{"id":"T76","span":{"begin":116,"end":123},"obj":"Binding"}],"relations":[{"id":"R14","pred":"themeOf","subj":"T75","obj":"T76"}],"attributes":[{"subj":"T54","pred":"source","obj":"test3"},{"subj":"T75","pred":"source","obj":"test3"},{"subj":"T76","pred":"source","obj":"test3"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"pmc-enju-pas","color":"#b1ec93","default":true},{"id":"bionlp-st-ge-2016-test-proteins","color":"#ec93cb"},{"id":"bionlp-st-ge-2016-uniprot","color":"#93e6ec"},{"id":"GO-MF","color":"#ecd893"},{"id":"GO-CC","color":"#be93ec"},{"id":"simple1","color":"#93eca4"},{"id":"BioNLP16_DUT","color":"#ec939b"},{"id":"BioNLP16_Messiy","color":"#93b5ec"},{"id":"DLUT931","color":"#cfec93"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#ec93e9"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#93ecd4"},{"id":"bionlp-st-ge-2016-test-tees","color":"#ecba93"},{"id":"testone","color":"#a093ec"},{"id":"test3","color":"#9fec93"}]}]}}