PMC:1359074 / 683-831 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1359074","sourcedb":"PMC","sourceid":"1359074","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1359074","text":" the ɛy proximal promoter that is critical for Sox6 mediated repression. Electrophoretic mobility shift assay (EMSA) and chromatin immunoprecipitati","tracks":[{"project":"pmc-enju-pas","denotations":[{"id":"T375","span":{"begin":121,"end":130},"obj":"NN"},{"id":"T374","span":{"begin":117,"end":120},"obj":"CC"},{"id":"T373","span":{"begin":115,"end":116},"obj":"-RRB-"},{"id":"T372","span":{"begin":111,"end":115},"obj":"NN"},{"id":"T371","span":{"begin":110,"end":111},"obj":"-LRB-"},{"id":"T370","span":{"begin":104,"end":109},"obj":"NN"},{"id":"T369","span":{"begin":98,"end":103},"obj":"NN"},{"id":"T368","span":{"begin":89,"end":97},"obj":"NN"},{"id":"T367","span":{"begin":73,"end":88},"obj":"JJ"},{"id":"T366","span":{"begin":61,"end":71},"obj":"NN"},{"id":"T365","span":{"begin":52,"end":60},"obj":"VB"},{"id":"T364","span":{"begin":47,"end":51},"obj":"NN"},{"id":"T363","span":{"begin":43,"end":46},"obj":"IN"},{"id":"T362","span":{"begin":34,"end":42},"obj":"JJ"},{"id":"T361","span":{"begin":31,"end":33},"obj":"VB"},{"id":"T360","span":{"begin":26,"end":30},"obj":"WDT"},{"id":"T359","span":{"begin":17,"end":25},"obj":"NN"},{"id":"T358","span":{"begin":8,"end":16},"obj":"JJ"},{"id":"T357","span":{"begin":5,"end":7},"obj":"JJ"},{"id":"T356","span":{"begin":1,"end":4},"obj":"DT"}],"relations":[{"id":"R149","pred":"arg1Of","subj":"T359","obj":"T356"},{"id":"R150","pred":"arg1Of","subj":"T359","obj":"T357"},{"id":"R151","pred":"arg1Of","subj":"T359","obj":"T358"},{"id":"R152","pred":"arg1Of","subj":"T359","obj":"T360"},{"id":"R153","pred":"arg1Of","subj":"T359","obj":"T361"},{"id":"R154","pred":"arg1Of","subj":"T359","obj":"T362"},{"id":"R155","pred":"arg2Of","subj":"T362","obj":"T361"},{"id":"R156","pred":"arg1Of","subj":"T362","obj":"T363"},{"id":"R157","pred":"arg2Of","subj":"T366","obj":"T363"},{"id":"R158","pred":"arg1Of","subj":"T366","obj":"T364"},{"id":"R159","pred":"arg2Of","subj":"T366","obj":"T365"},{"id":"R160","pred":"arg1Of","subj":"T370","obj":"T367"},{"id":"R161","pred":"arg1Of","subj":"T370","obj":"T368"},{"id":"R162","pred":"arg1Of","subj":"T370","obj":"T369"},{"id":"R163","pred":"arg1Of","subj":"T370","obj":"T371"},{"id":"R164","pred":"arg1Of","subj":"T370","obj":"T374"},{"id":"R165","pred":"arg2Of","subj":"T372","obj":"T371"},{"id":"R166","pred":"arg3Of","subj":"T373","obj":"T371"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T375","pred":"source","obj":"pmc-enju-pas"},{"subj":"T374","pred":"source","obj":"pmc-enju-pas"},{"subj":"T373","pred":"source","obj":"pmc-enju-pas"},{"subj":"T372","pred":"source","obj":"pmc-enju-pas"},{"subj":"T371","pred":"source","obj":"pmc-enju-pas"},{"subj":"T370","pred":"source","obj":"pmc-enju-pas"},{"subj":"T369","pred":"source","obj":"pmc-enju-pas"},{"subj":"T368","pred":"source","obj":"pmc-enju-pas"},{"subj":"T367","pred":"source","obj":"pmc-enju-pas"},{"subj":"T366","pred":"source","obj":"pmc-enju-pas"},{"subj":"T365","pred":"source","obj":"pmc-enju-pas"},{"subj":"T364","pred":"source","obj":"pmc-enju-pas"},{"subj":"T363","pred":"source","obj":"pmc-enju-pas"},{"subj":"T362","pred":"source","obj":"pmc-enju-pas"},{"subj":"T361","pred":"source","obj":"pmc-enju-pas"},{"subj":"T360","pred":"source","obj":"pmc-enju-pas"},{"subj":"T359","pred":"source","obj":"pmc-enju-pas"},{"subj":"T358","pred":"source","obj":"pmc-enju-pas"},{"subj":"T357","pred":"source","obj":"pmc-enju-pas"},{"subj":"T356","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T153","span":{"begin":5,"end":7},"obj":"Protein"},{"id":"T154","span":{"begin":47,"end":51},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T153","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"},{"subj":"T154","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T477","span":{"begin":47,"end":51},"obj":"http://www.uniprot.org/uniprot/P35712"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T477","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"GO-CC","denotations":[{"id":"T178","span":{"begin":121,"end":130},"obj":"http://purl.obolibrary.org/obo/GO_0000785"}],"attributes":[{"subj":"T178","pred":"source","obj":"GO-CC"}]},{"project":"simple1","denotations":[{"id":"T239","span":{"begin":47,"end":51},"obj":"Protein"},{"id":"T238","span":{"begin":5,"end":7},"obj":"Protein"}],"attributes":[{"subj":"T239","pred":"source","obj":"simple1"},{"subj":"T238","pred":"source","obj":"simple1"}]},{"project":"BioNLP16_DUT","denotations":[{"id":"T883","span":{"begin":5,"end":7},"obj":"Protein"},{"id":"T884","span":{"begin":47,"end":51},"obj":"Protein"},{"id":"T898","span":{"begin":61,"end":71},"obj":"Negative_regulation"}],"relations":[{"id":"R588","pred":"themeOf","subj":"T884","obj":"T898"}],"attributes":[{"subj":"T883","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T884","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T898","pred":"source","obj":"BioNLP16_DUT"}]},{"project":"BioNLP16_Messiy","denotations":[{"id":"T491","span":{"begin":5,"end":7},"obj":"Protein"},{"id":"T492","span":{"begin":47,"end":51},"obj":"Protein"},{"id":"T507","span":{"begin":52,"end":60},"obj":"Positive_regulation"},{"id":"T508","span":{"begin":61,"end":71},"obj":"Negative_regulation"}],"relations":[{"id":"R449","pred":"themeOf","subj":"T492","obj":"T508"},{"id":"R459","pred":"themeOf","subj":"T508","obj":"T507"}],"attributes":[{"subj":"T491","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T492","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T507","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T508","pred":"source","obj":"BioNLP16_Messiy"}]},{"project":"DLUT931","denotations":[{"id":"T522","span":{"begin":5,"end":7},"obj":"Protein"},{"id":"T523","span":{"begin":47,"end":51},"obj":"Protein"}],"attributes":[{"subj":"T522","pred":"source","obj":"DLUT931"},{"subj":"T523","pred":"source","obj":"DLUT931"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T873","span":{"begin":43,"end":71},"obj":"Regulation"},{"id":"T866","span":{"begin":5,"end":7},"obj":"Protein"},{"id":"T855","span":{"begin":121,"end":130},"obj":"Entity"},{"id":"T861","span":{"begin":43,"end":71},"obj":"Protein"}],"relations":[{"id":"R584","pred":"themeOf","subj":"T861","obj":"T873"}],"attributes":[{"subj":"T873","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T866","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T855","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T861","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T703","span":{"begin":121,"end":130},"obj":"NN"},{"id":"T702","span":{"begin":117,"end":120},"obj":"CC"},{"id":"T701","span":{"begin":115,"end":116},"obj":"-RRB-"},{"id":"T700","span":{"begin":111,"end":115},"obj":"NNP"},{"id":"T699","span":{"begin":110,"end":111},"obj":"-LRB-"},{"id":"T698","span":{"begin":104,"end":109},"obj":"NN"},{"id":"T697","span":{"begin":98,"end":103},"obj":"NN"},{"id":"T696","span":{"begin":89,"end":97},"obj":"NN"},{"id":"T695","span":{"begin":73,"end":88},"obj":"JJ"},{"id":"T694","span":{"begin":71,"end":72},"obj":"."},{"id":"T693","span":{"begin":61,"end":71},"obj":"NN"},{"id":"T692","span":{"begin":52,"end":60},"obj":"VBN"},{"id":"T691","span":{"begin":47,"end":51},"obj":"JJ"},{"id":"T690","span":{"begin":43,"end":46},"obj":"IN"},{"id":"T689","span":{"begin":34,"end":42},"obj":"JJ"},{"id":"T688","span":{"begin":31,"end":33},"obj":"VBZ"},{"id":"T687","span":{"begin":26,"end":30},"obj":"WDT"},{"id":"T686","span":{"begin":17,"end":25},"obj":"NN"},{"id":"T685","span":{"begin":8,"end":16},"obj":"JJ"},{"id":"T684","span":{"begin":5,"end":7},"obj":"JJ"},{"id":"T683","span":{"begin":1,"end":4},"obj":"DT"}],"relations":[{"id":"R379","pred":"det","subj":"T683","obj":"T686"},{"id":"R380","pred":"amod","subj":"T684","obj":"T686"},{"id":"R381","pred":"amod","subj":"T685","obj":"T686"},{"id":"R383","pred":"nsubj","subj":"T687","obj":"T688"},{"id":"R384","pred":"relcl","subj":"T688","obj":"T686"},{"id":"R385","pred":"acomp","subj":"T689","obj":"T688"},{"id":"R386","pred":"prep","subj":"T690","obj":"T689"},{"id":"R387","pred":"amod","subj":"T691","obj":"T693"},{"id":"R388","pred":"amod","subj":"T692","obj":"T693"},{"id":"R389","pred":"pobj","subj":"T693","obj":"T690"},{"id":"R391","pred":"amod","subj":"T695","obj":"T698"},{"id":"R392","pred":"compound","subj":"T696","obj":"T698"},{"id":"R393","pred":"compound","subj":"T697","obj":"T698"},{"id":"R395","pred":"punct","subj":"T699","obj":"T700"},{"id":"R396","pred":"appos","subj":"T700","obj":"T698"},{"id":"R397","pred":"punct","subj":"T701","obj":"T700"},{"id":"R398","pred":"cc","subj":"T702","obj":"T698"}],"attributes":[{"subj":"T703","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T702","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T701","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T700","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T699","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T698","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T697","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T696","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T695","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T694","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T693","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T692","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T691","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T690","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T689","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T688","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T687","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T686","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T685","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T684","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T683","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T215","span":{"begin":47,"end":51},"obj":"Protein"}],"attributes":[{"subj":"T215","pred":"source","obj":"bionlp-st-ge-2016-test-tees"}]},{"project":"testone","denotations":[{"id":"T27","span":{"begin":5,"end":7},"obj":"Protein"},{"id":"T28","span":{"begin":47,"end":51},"obj":"Protein"}],"attributes":[{"subj":"T27","pred":"source","obj":"testone"},{"subj":"T28","pred":"source","obj":"testone"}]},{"project":"test3","denotations":[{"id":"T52","span":{"begin":5,"end":7},"obj":"Protein"},{"id":"T53","span":{"begin":47,"end":51},"obj":"Protein"},{"id":"T73","span":{"begin":5,"end":7},"obj":"Protein"},{"id":"T74","span":{"begin":47,"end":51},"obj":"Protein"}],"relations":[{"id":"R13","pred":"themeOf","subj":"T74","obj":"T73"}],"attributes":[{"subj":"T52","pred":"source","obj":"test3"},{"subj":"T53","pred":"source","obj":"test3"},{"subj":"T73","pred":"source","obj":"test3"},{"subj":"T74","pred":"source","obj":"test3"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"pmc-enju-pas","color":"#a193ec","default":true},{"id":"bionlp-st-ge-2016-test-proteins","color":"#9eec93"},{"id":"bionlp-st-ge-2016-uniprot","color":"#ec93b8"},{"id":"GO-CC","color":"#93d2ec"},{"id":"simple1","color":"#eceb93"},{"id":"BioNLP16_DUT","color":"#d193ec"},{"id":"BioNLP16_Messiy","color":"#93ecb7"},{"id":"DLUT931","color":"#ec9d93"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#93a2ec"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#bcec93"},{"id":"bionlp-st-ge-2016-test-tees","color":"#ec93d6"},{"id":"testone","color":"#93ece7"},{"id":"test3","color":"#eccd93"}]}]}}