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PMC:1359074 / 599-755 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T366 145-155 NN denotes repression
T365 136-144 VB denotes mediated
T364 131-135 NN denotes Sox6
T363 127-130 IN denotes for
T362 118-126 JJ denotes critical
T361 115-117 VB denotes is
T360 110-114 WDT denotes that
T359 101-109 NN denotes promoter
T358 92-100 JJ denotes proximal
T357 89-91 JJ denotes ɛy
T356 85-88 DT denotes the
T355 82-84 IN denotes of
T354 75-81 NN denotes region
T353 70-74 NN denotes pair
T352 62-69 NN denotes 36–base
T351 60-61 DT denotes a
T350 53-59 VB denotes define
T349 47-52 NN denotes cells
T348 45-46 -RRB- denotes )
T347 30-45 JJ denotes erythroleukemic
T346 29-30 -LRB- denotes (
T345 23-28 NN denotes GM979
T344 20-22 IN denotes in
T343 13-19 NN denotes assays
T342 0-12 NN denotes Transfection
R135 T343 T342 arg1Of assays,Transfection
R136 T343 T344 arg1Of assays,in
R137 T343 T350 arg1Of assays,define
R138 T347 T346 arg2Of erythroleukemic,(
R139 T348 T346 arg3Of ),(
R140 T349 T344 arg2Of cells,in
R141 T349 T345 arg1Of cells,GM979
R142 T349 T346 arg1Of cells,(
R143 T354 T350 arg2Of region,define
R144 T354 T351 arg1Of region,a
R145 T354 T352 arg1Of region,36–base
R146 T354 T353 arg1Of region,pair
R147 T354 T355 arg1Of region,of
R148 T359 T355 arg2Of promoter,of
R149 T359 T356 arg1Of promoter,the
R150 T359 T357 arg1Of promoter,ɛy
R151 T359 T358 arg1Of promoter,proximal
R152 T359 T360 arg1Of promoter,that
R153 T359 T361 arg1Of promoter,is
R154 T359 T362 arg1Of promoter,critical
R155 T362 T361 arg2Of critical,is
R156 T362 T363 arg1Of critical,for
R157 T366 T363 arg2Of repression,for
R158 T366 T364 arg1Of repression,Sox6
R159 T366 T365 arg2Of repression,mediated

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T153 89-91 Protein denotes ɛy
T154 131-135 Protein denotes Sox6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T477 131-135 http://www.uniprot.org/uniprot/P35712 denotes Sox6

GO-CC

Id Subject Object Predicate Lexical cue
T175 47-52 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T95 0-156 Sentence denotes Transfection assays in GM979 (erythroleukemic) cells define a 36–base pair region of the ɛy proximal promoter that is critical for Sox6 mediated repression.
T7 0-156 Sentence denotes Transfection assays in GM979 (erythroleukemic) cells define a 36–base pair region of the ɛy proximal promoter that is critical for Sox6 mediated repression.

simple1

Id Subject Object Predicate Lexical cue
T239 131-135 Protein denotes Sox6
T238 89-91 Protein denotes ɛy

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T883 89-91 Protein denotes ɛy
T884 131-135 Protein denotes Sox6
T898 145-155 Negative_regulation denotes repression
R588 T884 T898 themeOf Sox6,repression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T491 89-91 Protein denotes ɛy
T492 131-135 Protein denotes Sox6
T507 136-144 Positive_regulation denotes mediated
T508 145-155 Negative_regulation denotes repression
R449 T492 T508 themeOf Sox6,repression
R459 T508 T507 themeOf repression,mediated

DLUT931

Id Subject Object Predicate Lexical cue
T522 89-91 Protein denotes ɛy
T523 131-135 Protein denotes Sox6

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T873 127-155 Regulation denotes for Sox6 mediated repression
T866 89-91 Protein denotes ɛy
T839 47-52 Entity denotes cells
T859 82-109 Entity denotes of the ɛy proximal promoter
T861 127-155 Protein denotes for Sox6 mediated repression
R582 T859 T866 partOf of the ɛy proximal promoter,ɛy
R584 T861 T873 themeOf for Sox6 mediated repression,for Sox6 mediated repression

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T694 155-156 . denotes .
T693 145-155 NN denotes repression
T692 136-144 VBN denotes mediated
T691 131-135 JJ denotes Sox6
T690 127-130 IN denotes for
T689 118-126 JJ denotes critical
T688 115-117 VBZ denotes is
T687 110-114 WDT denotes that
T686 101-109 NN denotes promoter
T685 92-100 JJ denotes proximal
T684 89-91 JJ denotes ɛy
T683 85-88 DT denotes the
T682 82-84 IN denotes of
T681 75-81 NN denotes region
T680 70-74 NN denotes pair
T679 65-69 JJ denotes base
T678 62-64 CD denotes 36
T677 60-61 DT denotes a
T676 53-59 VBP denotes define
T675 47-52 NNS denotes cells
T674 45-46 -RRB- denotes )
T673 30-45 JJ denotes erythroleukemic
T672 29-30 -LRB- denotes (
T671 23-28 NNP denotes GM979
T670 20-22 IN denotes in
T669 13-19 NNS denotes assays
T668 0-12 NNP denotes Transfection
R364 T668 T669 compound Transfection,assays
R365 T669 T676 nsubj assays,define
R366 T670 T669 prep in,assays
R367 T671 T670 pobj GM979,in
R368 T672 T673 punct (,erythroleukemic
R369 T673 T671 appos erythroleukemic,GM979
R370 T674 T673 punct ),erythroleukemic
R371 T675 T676 nsubj cells,define
R372 T676 T676 ROOT define,define
R373 T677 T681 det a,region
R374 T678 T681 nummod 36,region
R375 T679 T681 compound base,region
R376 T680 T681 compound pair,region
R377 T681 T676 dobj region,define
R378 T682 T681 prep of,region
R379 T683 T686 det the,promoter
R380 T684 T686 amod ɛy,promoter
R381 T685 T686 amod proximal,promoter
R382 T686 T682 pobj promoter,of
R383 T687 T688 nsubj that,is
R384 T688 T686 relcl is,promoter
R385 T689 T688 acomp critical,is
R386 T690 T689 prep for,critical
R387 T691 T693 amod Sox6,repression
R388 T692 T693 amod mediated,repression
R389 T693 T690 pobj repression,for
R390 T694 T676 punct .,define

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T215 131-135 Protein denotes Sox6

testone

Id Subject Object Predicate Lexical cue
T27 89-91 Protein denotes ɛy
T28 131-135 Protein denotes Sox6

test3

Id Subject Object Predicate Lexical cue
T52 89-91 Protein denotes ɛy
T53 131-135 Protein denotes Sox6
T73 89-91 Protein denotes ɛy
T74 131-135 Protein denotes Sox6
R13 T74 T73 themeOf Sox6,ɛy