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PMC:1359074 / 4880-5050 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T2087 153-161 NN denotes sequence
T2086 145-152 IN denotes without
T2085 141-144 CC denotes but
T2084 139-140 -COMMA- denotes ,
T2083 136-139 NN denotes DNA
T2082 131-135 NN denotes bend
T2081 127-130 CC denotes and
T2080 120-126 NN denotes groove
T2079 114-119 JJ denotes minor
T2078 110-113 DT denotes the
T2077 107-109 TO denotes to
T2076 102-106 VB denotes bind
T2075 92-101 RB denotes similarly
T2074 87-91 WDT denotes that
T2073 85-86 -RRB- denotes )
T2072 79-85 NN denotes family
T2071 72-78 NN denotes factor
T2070 58-71 NN denotes transcription
T2069 54-57 NN denotes Sox
T2068 50-53 DT denotes the
T2067 47-49 IN denotes of
T2066 36-46 VB denotes identified
T2065 29-35 NN denotes member
T2064 23-28 JJ denotes first
T2063 19-22 DT denotes the
T2062 18-19 -LRB- denotes (
T2061 14-17 NN denotes Sry
T2060 11-13 TO denotes to
T2059 3-10 VB denotes related
R1175 T2059 T2060 arg1Of related,to
R1176 T2061 T2060 arg2Of Sry,to
R1177 T2061 T2062 arg1Of Sry,(
R1178 T2065 T2062 arg2Of member,(
R1179 T2065 T2063 arg1Of member,the
R1180 T2065 T2064 arg1Of member,first
R1181 T2065 T2066 arg2Of member,identified
R1182 T2066 T2067 arg1Of identified,of
R1183 T2072 T2067 arg2Of family,of
R1184 T2072 T2068 arg1Of family,the
R1185 T2072 T2069 arg1Of family,Sox
R1186 T2072 T2070 arg1Of family,transcription
R1187 T2072 T2071 arg1Of family,factor
R1188 T2073 T2062 arg3Of ),(
R1190 T2074 T2076 arg1Of that,bind
R1192 T2076 T2075 arg1Of bind,similarly
R1193 T2076 T2077 arg1Of bind,to
R1194 T2076 T2086 arg1Of bind,without
R1195 T2077 T2085 arg1Of to,but
R1196 T2080 T2081 arg1Of groove,and
R1197 T2082 T2081 arg2Of bend,and
R1198 T2083 T2077 arg2Of DNA,to
R1199 T2083 T2078 arg1Of DNA,the
R1200 T2083 T2079 arg1Of DNA,minor
R1201 T2083 T2080 arg1Of DNA,groove
R1202 T2083 T2082 arg1Of DNA,bend
R1203 T2085 T2084 arg1Of but,","
R1204 T2086 T2085 arg2Of without,but

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T1430 14-17 Protein denotes Sry

GO-BP

Id Subject Object Predicate Lexical cue
T1240 58-71 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

GO-CC

Id Subject Object Predicate Lexical cue
T1488 120-126 http://purl.obolibrary.org/obo/GO_0097610 denotes groove

simple1

Id Subject Object Predicate Lexical cue
T1657 14-17 Protein denotes Sry

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T4279 102-106 Binding denotes bind
T4235 14-17 Protein denotes Sry
R3031 T4235 T4279 themeOf Sry,bind

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T2743 102-106 Binding denotes bind
T2699 14-17 Protein denotes Sry
R1788 T2699 T2743 themeOf Sry,bind

DLUT931

Id Subject Object Predicate Lexical cue
T2821 102-106 Binding denotes bind
T2777 14-17 Protein denotes Sry
R1857 T2777 T2821 themeOf Sry,bind

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4072 120-126 Entity denotes groove
T4067 50-85 Protein denotes the Sox transcription factor family
T4052 54-57 Protein denotes Sox
T4189 110-140 Entity denotes the minor groove and bend DNA,
T4162 11-86 Protein denotes to Sry (the first member identified of the Sox transcription factor family)

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3319 153-161 NN denotes sequence
T3318 145-152 IN denotes without
T3317 141-144 CC denotes but
T3316 139-140 , denotes ,
T3315 136-139 NNP denotes DNA
T3314 131-135 VB denotes bend
T3313 127-130 CC denotes and
T3312 120-126 NN denotes groove
T3311 114-119 JJ denotes minor
T3310 110-113 DT denotes the
T3309 107-109 TO denotes to
T3308 102-106 NN denotes bind
T3307 92-101 RB denotes similarly
T3306 87-91 WDT denotes that
T3305 85-86 -RRB- denotes )
T3304 79-85 NN denotes family
T3303 72-78 NN denotes factor
T3302 58-71 NN denotes transcription
T3301 54-57 NNPS denotes Sox
T3300 50-53 DT denotes the
T3299 47-49 IN denotes of
T3298 36-46 VBN denotes identified
T3297 29-35 NN denotes member
T3296 23-28 JJ denotes first
T3295 19-22 DT denotes the
T3294 18-19 -LRB- denotes (
T3293 14-17 NNP denotes Sry
T3292 11-13 TO denotes to
T3291 3-10 VBN denotes related
R2293 T3292 T3291 prep to,related
R2295 T3293 T3292 pobj Sry,to
R2296 T3294 T3293 punct (,Sry
R2297 T3295 T3297 det the,member
R2299 T3296 T3297 amod first,member
R2300 T3297 T3293 appos member,Sry
R2301 T3298 T3297 acl identified,member
R2303 T3299 T3298 prep of,identified
R2304 T3300 T3304 det the,family
R2305 T3314 T3308 conj bend,bind
R2306 T3301 T3303 compound Sox,factor
R2307 T3302 T3303 compound transcription,factor
R2308 T3303 T3304 compound factor,family
R2309 T3304 T3299 pobj family,of
R2310 T3315 T3314 dobj DNA,bend
R2311 T3305 T3293 punct ),Sry
R2312 T3306 T3308 nsubj that,bind
R2313 T3307 T3308 advmod similarly,bind
R2314 T3316 T3314 punct ",",bend
R2316 T3309 T3308 prep to,bind
R2317 T3310 T3312 det the,groove
R2318 T3311 T3312 amod minor,groove
R2319 T3312 T3309 pobj groove,to
R2320 T3313 T3308 cc and,bind
R2321 T3317 T3314 cc but,bend
R2322 T3318 T3308 prep without,bind

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1535 102-106 Binding denotes bind
T1532 54-85 Protein denotes Sox transcription factor family
T1531 14-17 Protein denotes Sry
R765 T1531 T1535 themeOf Sry,bind

testone

Id Subject Object Predicate Lexical cue
T1036 102-106 Binding denotes bind
T993 14-17 Protein denotes Sry
R604 T993 T1036 themeOf Sry,bind

test3

Id Subject Object Predicate Lexical cue
T1139 102-106 Binding denotes bind
T1138 14-17 Protein denotes Sry
T1081 14-17 Protein denotes Sry
R644 T1138 T1139 themeOf Sry,bind