PMC:1359074 / 4846-5404
Annnotations
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
16462943-11497996-85760968 | 264-266 | 11497996 | denotes | 17 |
16462943-10871404-85760969 | 551-553 | 10871404 | denotes | 18 |
16462943-8622684-85760969 | 551-553 | 8622684 | denotes | 18 |
16462943-9566881-85760969 | 551-553 | 9566881 | denotes | 18 |
16462943-10908341-85760969 | 551-553 | 10908341 | denotes | 18 |
T43152 | 264-266 | 11497996 | denotes | 17 |
T58158 | 551-553 | 10871404 | denotes | 18 |
T32189 | 551-553 | 8622684 | denotes | 18 |
T90133 | 551-553 | 9566881 | denotes | 18 |
T83229 | 551-553 | 10908341 | denotes | 18 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2145 | 556-557 | -RRB- | denotes | ] |
T2144 | 551-556 | CD | denotes | 18–21 |
T2143 | 550-551 | -LRB- | denotes | [ |
T2142 | 544-549 | NN | denotes | genes |
T2141 | 535-543 | JJ | denotes | β-globin |
T2140 | 526-534 | VB | denotes | modulate |
T2139 | 523-525 | TO | denotes | to |
T2138 | 517-522 | VB | denotes | shown |
T2137 | 512-516 | VB | denotes | been |
T2136 | 507-511 | VB | denotes | have |
T2135 | 498-506 | NN | denotes | proteins |
T2134 | 494-497 | NN | denotes | HMG |
T2133 | 492-493 | -COMMA- | denotes | , |
T2132 | 480-492 | RB | denotes | Specifically |
T2131 | 471-478 | NN | denotes | factors |
T2130 | 460-470 | VB | denotes | associated |
T2129 | 456-459 | CC | denotes | and |
T2128 | 452-455 | NN | denotes | DNA |
T2127 | 449-451 | IN | denotes | of |
T2126 | 441-448 | NN | denotes | regions |
T2125 | 433-440 | JJ | denotes | distant |
T2124 | 424-432 | RB | denotes | together |
T2123 | 415-423 | VB | denotes | bringing |
T2122 | 412-414 | IN | denotes | by |
T2121 | 406-411 | NN | denotes | genes |
T2120 | 386-405 | JJ | denotes | chromatin-assembled |
T2119 | 382-385 | CC | denotes | and |
T2118 | 378-381 | NN | denotes | DNA |
T2117 | 373-377 | CC | denotes | both |
T2116 | 370-372 | IN | denotes | on |
T2115 | 361-369 | NN | denotes | function |
T2114 | 352-360 | NN | denotes | enhancer |
T2113 | 341-351 | JJ | denotes | long-range |
T2112 | 333-340 | VB | denotes | mediate |
T2111 | 329-332 | MD | denotes | can |
T2110 | 320-328 | NN | denotes | proteins |
T2109 | 316-319 | NN | denotes | HMG |
T2108 | 310-315 | JJ | denotes | other |
T2107 | 306-309 | CC | denotes | and |
T2106 | 300-305 | DT | denotes | these |
T2105 | 297-299 | IN | denotes | by |
T2104 | 287-296 | NN | denotes | structure |
T2103 | 283-286 | NN | denotes | DNA |
T2102 | 280-282 | IN | denotes | of |
T2101 | 269-279 | NN | denotes | Modulation |
T2100 | 266-267 | -RRB- | denotes | ] |
T2099 | 264-266 | CD | denotes | 17 |
T2098 | 263-264 | -LRB- | denotes | [ |
T2097 | 254-262 | NN | denotes | proteins |
T2096 | 249-253 | NN | denotes | HMG2 |
T2095 | 245-248 | CC | denotes | and |
T2094 | 240-244 | NN | denotes | HMG1 |
T2093 | 230-239 | VB | denotes | expressed |
T2092 | 217-229 | RB | denotes | ubiquitously |
T2091 | 213-216 | DT | denotes | the |
T2090 | 209-212 | VB | denotes | are |
T2089 | 207-208 | -COMMA- | denotes | , |
T2088 | 196-207 | NN | denotes | specificity |
T2087 | 187-195 | NN | denotes | sequence |
T2086 | 179-186 | IN | denotes | without |
T2085 | 175-178 | CC | denotes | but |
T2084 | 173-174 | -COMMA- | denotes | , |
T2083 | 170-173 | NN | denotes | DNA |
T2082 | 165-169 | NN | denotes | bend |
T2081 | 161-164 | CC | denotes | and |
T2080 | 154-160 | NN | denotes | groove |
T2079 | 148-153 | JJ | denotes | minor |
T2078 | 144-147 | DT | denotes | the |
T2077 | 141-143 | TO | denotes | to |
T2076 | 136-140 | VB | denotes | bind |
T2075 | 126-135 | RB | denotes | similarly |
T2074 | 121-125 | WDT | denotes | that |
T2073 | 119-120 | -RRB- | denotes | ) |
T2072 | 113-119 | NN | denotes | family |
T2071 | 106-112 | NN | denotes | factor |
T2070 | 92-105 | NN | denotes | transcription |
T2069 | 88-91 | NN | denotes | Sox |
T2068 | 84-87 | DT | denotes | the |
T2067 | 81-83 | IN | denotes | of |
T2066 | 70-80 | VB | denotes | identified |
T2065 | 63-69 | NN | denotes | member |
T2064 | 57-62 | JJ | denotes | first |
T2063 | 53-56 | DT | denotes | the |
T2062 | 52-53 | -LRB- | denotes | ( |
T2061 | 48-51 | NN | denotes | Sry |
T2060 | 45-47 | TO | denotes | to |
T2059 | 37-44 | VB | denotes | related |
T2058 | 27-36 | RB | denotes | distantly |
T2057 | 18-26 | NN | denotes | proteins |
T2056 | 14-17 | NN | denotes | box |
T2055 | 10-13 | NN | denotes | HMG |
T2054 | 6-9 | DT | denotes | the |
T2053 | 0-5 | IN | denotes | Among |
R1169 | T2057 | T2053 | arg2Of | proteins,Among |
R1170 | T2057 | T2054 | arg1Of | proteins,the |
R1171 | T2057 | T2055 | arg1Of | proteins,HMG |
R1172 | T2057 | T2056 | arg1Of | proteins,box |
R1173 | T2057 | T2059 | arg2Of | proteins,related |
R1174 | T2059 | T2058 | arg1Of | related,distantly |
R1175 | T2059 | T2060 | arg1Of | related,to |
R1176 | T2061 | T2060 | arg2Of | Sry,to |
R1177 | T2061 | T2062 | arg1Of | Sry,( |
R1178 | T2065 | T2062 | arg2Of | member,( |
R1179 | T2065 | T2063 | arg1Of | member,the |
R1180 | T2065 | T2064 | arg1Of | member,first |
R1181 | T2065 | T2066 | arg2Of | member,identified |
R1182 | T2066 | T2067 | arg1Of | identified,of |
R1183 | T2072 | T2067 | arg2Of | family,of |
R1184 | T2072 | T2068 | arg1Of | family,the |
R1185 | T2072 | T2069 | arg1Of | family,Sox |
R1186 | T2072 | T2070 | arg1Of | family,transcription |
R1187 | T2072 | T2071 | arg1Of | family,factor |
R1188 | T2073 | T2062 | arg3Of | ),( |
R1189 | T2074 | T2053 | arg1Of | that,Among |
R1190 | T2074 | T2076 | arg1Of | that,bind |
R1191 | T2074 | T2090 | arg1Of | that,are |
R1192 | T2076 | T2075 | arg1Of | bind,similarly |
R1193 | T2076 | T2077 | arg1Of | bind,to |
R1194 | T2076 | T2086 | arg1Of | bind,without |
R1195 | T2077 | T2085 | arg1Of | to,but |
R1196 | T2080 | T2081 | arg1Of | groove,and |
R1197 | T2082 | T2081 | arg2Of | bend,and |
R1198 | T2083 | T2077 | arg2Of | DNA,to |
R1199 | T2083 | T2078 | arg1Of | DNA,the |
R1200 | T2083 | T2079 | arg1Of | DNA,minor |
R1201 | T2083 | T2080 | arg1Of | DNA,groove |
R1202 | T2083 | T2082 | arg1Of | DNA,bend |
R1203 | T2085 | T2084 | arg1Of | but,"," |
R1204 | T2086 | T2085 | arg2Of | without,but |
R1205 | T2088 | T2086 | arg2Of | specificity,without |
R1206 | T2088 | T2087 | arg1Of | specificity,sequence |
R1207 | T2090 | T2089 | arg1Of | are,"," |
R1208 | T2090 | T2098 | arg1Of | are,[ |
R1209 | T2093 | T2092 | arg1Of | expressed,ubiquitously |
R1210 | T2094 | T2093 | arg1Of | HMG1,expressed |
R1211 | T2094 | T2095 | arg1Of | HMG1,and |
R1212 | T2095 | T2090 | arg2Of | and,are |
R1213 | T2095 | T2091 | arg1Of | and,the |
R1214 | T2097 | T2095 | arg2Of | proteins,and |
R1215 | T2097 | T2096 | arg1Of | proteins,HMG2 |
R1216 | T2099 | T2098 | arg2Of | 17,[ |
R1217 | T2100 | T2098 | arg3Of | ],[ |
R1218 | T2101 | T2102 | arg1Of | Modulation,of |
R1219 | T2101 | T2105 | arg1Of | Modulation,by |
R1220 | T2101 | T2111 | arg1Of | Modulation,can |
R1221 | T2101 | T2112 | arg1Of | Modulation,mediate |
R1222 | T2101 | T2123 | arg1Of | Modulation,bringing |
R1223 | T2104 | T2102 | arg2Of | structure,of |
R1224 | T2104 | T2103 | arg1Of | structure,DNA |
R1225 | T2110 | T2105 | arg2Of | proteins,by |
R1226 | T2110 | T2106 | arg1Of | proteins,these |
R1227 | T2110 | T2107 | arg1Of | proteins,and |
R1228 | T2110 | T2108 | arg1Of | proteins,other |
R1229 | T2110 | T2109 | arg1Of | proteins,HMG |
R1230 | T2112 | T2111 | arg2Of | mediate,can |
R1231 | T2112 | T2116 | arg1Of | mediate,on |
R1232 | T2112 | T2122 | arg1Of | mediate,by |
R1233 | T2115 | T2112 | arg2Of | function,mediate |
R1234 | T2115 | T2113 | arg1Of | function,long-range |
R1235 | T2115 | T2114 | arg1Of | function,enhancer |
R1236 | T2118 | T2119 | arg1Of | DNA,and |
R1237 | T2119 | T2116 | arg2Of | and,on |
R1238 | T2119 | T2117 | arg1Of | and,both |
R1239 | T2121 | T2119 | arg2Of | genes,and |
R1240 | T2121 | T2120 | arg1Of | genes,chromatin-assembled |
R1241 | T2123 | T2122 | arg2Of | bringing,by |
R1242 | T2123 | T2124 | arg1Of | bringing,together |
R1243 | T2126 | T2123 | arg2Of | regions,bringing |
R1244 | T2126 | T2125 | arg1Of | regions,distant |
R1245 | T2126 | T2127 | arg1Of | regions,of |
R1246 | T2128 | T2129 | arg1Of | DNA,and |
R1247 | T2129 | T2127 | arg2Of | and,of |
R1248 | T2131 | T2129 | arg2Of | factors,and |
R1249 | T2131 | T2130 | arg2Of | factors,associated |
R1250 | T2135 | T2134 | arg1Of | proteins,HMG |
R1251 | T2135 | T2136 | arg1Of | proteins,have |
R1252 | T2135 | T2137 | arg1Of | proteins,been |
R1253 | T2135 | T2138 | arg2Of | proteins,shown |
R1254 | T2135 | T2140 | arg1Of | proteins,modulate |
R1255 | T2138 | T2132 | arg1Of | shown,Specifically |
R1256 | T2138 | T2133 | arg1Of | shown,"," |
R1257 | T2138 | T2136 | arg2Of | shown,have |
R1258 | T2138 | T2137 | arg2Of | shown,been |
R1259 | T2140 | T2138 | arg3Of | modulate,shown |
R1260 | T2140 | T2139 | arg1Of | modulate,to |
R1261 | T2142 | T2140 | arg2Of | genes,modulate |
R1262 | T2142 | T2141 | arg1Of | genes,β-globin |
R1263 | T2142 | T2143 | arg1Of | genes,[ |
R1264 | T2144 | T2143 | arg2Of | 18–21,[ |
R1265 | T2145 | T2143 | arg3Of | ],[ |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1432 | 249-253 | Protein | denotes | HMG2 |
T1431 | 240-244 | Protein | denotes | HMG1 |
T1430 | 48-51 | Protein | denotes | Sry |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1264 | 537-543 | http://purl.obolibrary.org/obo/GO_0005344 | denotes | globin |
T1240 | 92-105 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1470 | 537-543 | http://purl.obolibrary.org/obo/GO_0005344 | denotes | globin |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1490 | 386-395 | http://purl.obolibrary.org/obo/GO_0000785 | denotes | chromatin |
T1488 | 154-160 | http://purl.obolibrary.org/obo/GO_0097610 | denotes | groove |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1213 | 480-558 | Sentence | denotes | Specifically, HMG proteins have been shown to modulate β-globin genes [18–21]. |
T1212 | 269-479 | Sentence | denotes | Modulation of DNA structure by these and other HMG proteins can mediate long-range enhancer function on both DNA and chromatin-assembled genes by bringing together distant regions of DNA and associated factors. |
T1211 | 0-268 | Sentence | denotes | Among the HMG box proteins distantly related to Sry (the first member identified of the Sox transcription factor family) that similarly bind to the minor groove and bend DNA, but without sequence specificity, are the ubiquitously expressed HMG1 and HMG2 proteins [17]. |
T31 | 0-268 | Sentence | denotes | Among the HMG box proteins distantly related to Sry (the first member identified of the Sox transcription factor family) that similarly bind to the minor groove and bend DNA, but without sequence specificity, are the ubiquitously expressed HMG1 and HMG2 proteins [17]. |
T32 | 269-479 | Sentence | denotes | Modulation of DNA structure by these and other HMG proteins can mediate long-range enhancer function on both DNA and chromatin-assembled genes by bringing together distant regions of DNA and associated factors. |
T33 | 480-558 | Sentence | denotes | Specifically, HMG proteins have been shown to modulate β-globin genes [18–21]. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1659 | 249-253 | Protein | denotes | HMG2 |
T1658 | 240-244 | Protein | denotes | HMG1 |
T1657 | 48-51 | Protein | denotes | Sry |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4279 | 136-140 | Binding | denotes | bind |
T4278 | 230-239 | Gene_expression | denotes | expressed |
T4237 | 249-253 | Protein | denotes | HMG2 |
T4236 | 240-244 | Protein | denotes | HMG1 |
T4235 | 48-51 | Protein | denotes | Sry |
R3031 | T4235 | T4279 | themeOf | Sry,bind |
R3032 | T4236 | T4278 | themeOf | HMG1,expressed |
R3033 | T4237 | T4278 | themeOf | HMG2,expressed |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2743 | 136-140 | Binding | denotes | bind |
T2742 | 230-239 | Gene_expression | denotes | expressed |
T2701 | 249-253 | Protein | denotes | HMG2 |
T2700 | 240-244 | Protein | denotes | HMG1 |
T2699 | 48-51 | Protein | denotes | Sry |
R1788 | T2699 | T2743 | themeOf | Sry,bind |
R1793 | T2700 | T2742 | themeOf | HMG1,expressed |
R1794 | T2701 | T2742 | themeOf | HMG2,expressed |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2822 | 230-239 | Gene_expression | denotes | expressed |
T2821 | 136-140 | Binding | denotes | bind |
T2779 | 249-253 | Protein | denotes | HMG2 |
T2778 | 240-244 | Protein | denotes | HMG1 |
T2777 | 48-51 | Protein | denotes | Sry |
R1860 | T2779 | T2822 | themeOf | HMG2,expressed |
R1857 | T2777 | T2821 | themeOf | Sry,bind |
R1858 | T2778 | T2822 | themeOf | HMG1,expressed |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4110 | 386-411 | Entity | denotes | chromatin-assembled genes |
T4105 | 249-253 | Protein | denotes | HMG2 |
T4093 | 6-26 | Protein | denotes | the HMG box proteins |
T4092 | 378-381 | Entity | denotes | DNA |
T4078 | 535-557 | Protein | denotes | β-globin genes [18–21] |
T4074 | 396-411 | Protein | denotes | assembled genes |
T4072 | 154-160 | Entity | denotes | groove |
T4067 | 84-119 | Protein | denotes | the Sox transcription factor family |
T4062 | 283-286 | Entity | denotes | DNA |
T4056 | 535-557 | Protein | denotes | β-globin genes [18–21] |
T4052 | 88-91 | Protein | denotes | Sox |
T4039 | 449-455 | Entity | denotes | of DNA |
T4215 | 396-411 | Binding | denotes | assembled genes |
T4210 | 494-557 | Regulation | denotes | HMG proteins have been shown to modulate β-globin genes [18–21] |
T4199 | 213-244 | Gene_expression | denotes | the ubiquitously expressed HMG1 |
T4189 | 144-174 | Entity | denotes | the minor groove and bend DNA, |
T4185 | 6-26 | Entity | denotes | the HMG box proteins |
T4183 | 386-411 | Entity | denotes | chromatin-assembled genes |
T4177 | 249-262 | Protein | denotes | HMG2 proteins |
T4129 | 494-506 | Protein | denotes | HMG proteins |
T4154 | 310-328 | Protein | denotes | other HMG proteins |
T4170 | 213-244 | Protein | denotes | the ubiquitously expressed HMG1 |
T4162 | 45-120 | Protein | denotes | to Sry (the first member identified of the Sox transcription factor family) |
R3003 | T4074 | T4215 | themeOf | assembled genes,assembled genes |
R3005 | T4078 | T4210 | themeOf | β-globin genes [18–21],HMG proteins have been shown to modulate β-globin genes [18–21] |
R3007 | T4129 | T4210 | causeOf | HMG proteins,HMG proteins have been shown to modulate β-globin genes [18–21] |
R3022 | T4170 | T4199 | themeOf | the ubiquitously expressed HMG1,the ubiquitously expressed HMG1 |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3381 | 557-558 | . | denotes | . |
T3380 | 556-557 | NN | denotes | ] |
T3379 | 554-556 | CD | denotes | 21 |
T3378 | 551-553 | CD | denotes | 18 |
T3377 | 550-551 | NNP | denotes | [ |
T3376 | 544-549 | NNS | denotes | genes |
T3375 | 535-543 | JJ | denotes | β-globin |
T3374 | 526-534 | VB | denotes | modulate |
T3373 | 523-525 | TO | denotes | to |
T3372 | 517-522 | VBN | denotes | shown |
T3371 | 512-516 | VBN | denotes | been |
T3370 | 507-511 | VBP | denotes | have |
T3369 | 498-506 | NNS | denotes | proteins |
T3368 | 494-497 | NNP | denotes | HMG |
T3367 | 492-493 | , | denotes | , |
T3366 | 480-492 | RB | denotes | Specifically |
T3365 | 478-479 | . | denotes | . |
T3364 | 471-478 | NNS | denotes | factors |
T3363 | 460-470 | VBN | denotes | associated |
T3362 | 456-459 | CC | denotes | and |
T3361 | 452-455 | NNP | denotes | DNA |
T3360 | 449-451 | IN | denotes | of |
T3359 | 441-448 | NNS | denotes | regions |
T3358 | 433-440 | JJ | denotes | distant |
T3357 | 424-432 | RB | denotes | together |
T3356 | 415-423 | VBG | denotes | bringing |
T3355 | 412-414 | IN | denotes | by |
T3354 | 406-411 | NNS | denotes | genes |
T3353 | 386-405 | JJ | denotes | chromatin-assembled |
T3352 | 382-385 | CC | denotes | and |
T3351 | 378-381 | NNP | denotes | DNA |
T3350 | 373-377 | DT | denotes | both |
T3349 | 370-372 | IN | denotes | on |
T3348 | 361-369 | NN | denotes | function |
T3347 | 352-360 | NN | denotes | enhancer |
T3346 | 341-351 | JJ | denotes | long-range |
T3345 | 333-340 | VB | denotes | mediate |
T3344 | 329-332 | MD | denotes | can |
T3343 | 320-328 | NNS | denotes | proteins |
T3342 | 316-319 | NNP | denotes | HMG |
T3341 | 310-315 | JJ | denotes | other |
T3340 | 306-309 | CC | denotes | and |
T3339 | 300-305 | DT | denotes | these |
T3338 | 297-299 | IN | denotes | by |
T3337 | 287-296 | NN | denotes | structure |
T3336 | 283-286 | NNP | denotes | DNA |
T3335 | 280-282 | IN | denotes | of |
T3334 | 269-279 | NNP | denotes | Modulation |
T3333 | 267-268 | . | denotes | . |
T3332 | 266-267 | NNP | denotes | ] |
T3331 | 264-266 | CD | denotes | 17 |
T3330 | 263-264 | NNP | denotes | [ |
T3329 | 254-262 | NNS | denotes | proteins |
T3328 | 249-253 | NNP | denotes | HMG2 |
T3327 | 245-248 | CC | denotes | and |
T3326 | 240-244 | NNP | denotes | HMG1 |
T3325 | 230-239 | VBN | denotes | expressed |
T3324 | 217-229 | RB | denotes | ubiquitously |
T3323 | 213-216 | DT | denotes | the |
T3322 | 209-212 | VBP | denotes | are |
T3321 | 207-208 | , | denotes | , |
T3320 | 196-207 | NN | denotes | specificity |
T3319 | 187-195 | NN | denotes | sequence |
T3318 | 179-186 | IN | denotes | without |
T3317 | 175-178 | CC | denotes | but |
T3316 | 173-174 | , | denotes | , |
T3315 | 170-173 | NNP | denotes | DNA |
T3314 | 165-169 | VB | denotes | bend |
T3313 | 161-164 | CC | denotes | and |
T3312 | 154-160 | NN | denotes | groove |
T3311 | 148-153 | JJ | denotes | minor |
T3310 | 144-147 | DT | denotes | the |
T3309 | 141-143 | TO | denotes | to |
T3308 | 136-140 | NN | denotes | bind |
T3307 | 126-135 | RB | denotes | similarly |
T3306 | 121-125 | WDT | denotes | that |
T3305 | 119-120 | -RRB- | denotes | ) |
T3304 | 113-119 | NN | denotes | family |
T3303 | 106-112 | NN | denotes | factor |
T3302 | 92-105 | NN | denotes | transcription |
T3301 | 88-91 | NNPS | denotes | Sox |
T3300 | 84-87 | DT | denotes | the |
T3299 | 81-83 | IN | denotes | of |
T3298 | 70-80 | VBN | denotes | identified |
T3297 | 63-69 | NN | denotes | member |
T3296 | 57-62 | JJ | denotes | first |
T3295 | 53-56 | DT | denotes | the |
T3294 | 52-53 | -LRB- | denotes | ( |
T3293 | 48-51 | NNP | denotes | Sry |
T3292 | 45-47 | TO | denotes | to |
T3291 | 37-44 | VBN | denotes | related |
T3290 | 27-36 | RB | denotes | distantly |
T3289 | 18-26 | NNS | denotes | proteins |
T3288 | 14-17 | NN | denotes | box |
T3287 | 10-13 | NNP | denotes | HMG |
T3286 | 6-9 | DT | denotes | the |
T3285 | 0-5 | IN | denotes | Among |
R2284 | T3285 | T3322 | prep | Among,are |
R2285 | T3286 | T3289 | det | the,proteins |
R2287 | T3287 | T3289 | compound | HMG,proteins |
R2288 | T3288 | T3289 | compound | box,proteins |
R2289 | T3289 | T3285 | pobj | proteins,Among |
R2291 | T3290 | T3291 | advmod | distantly,related |
R2292 | T3291 | T3289 | acl | related,proteins |
R2293 | T3292 | T3291 | prep | to,related |
R2295 | T3293 | T3292 | pobj | Sry,to |
R2296 | T3294 | T3293 | punct | (,Sry |
R2297 | T3295 | T3297 | det | the,member |
R2299 | T3296 | T3297 | amod | first,member |
R2300 | T3297 | T3293 | appos | member,Sry |
R2301 | T3298 | T3297 | acl | identified,member |
R2303 | T3299 | T3298 | prep | of,identified |
R2304 | T3300 | T3304 | det | the,family |
R2305 | T3314 | T3308 | conj | bend,bind |
R2306 | T3301 | T3303 | compound | Sox,factor |
R2307 | T3302 | T3303 | compound | transcription,factor |
R2308 | T3303 | T3304 | compound | factor,family |
R2309 | T3304 | T3299 | pobj | family,of |
R2310 | T3315 | T3314 | dobj | DNA,bend |
R2311 | T3305 | T3293 | punct | ),Sry |
R2312 | T3306 | T3308 | nsubj | that,bind |
R2313 | T3307 | T3308 | advmod | similarly,bind |
R2314 | T3316 | T3314 | punct | ",",bend |
R2315 | T3308 | T3289 | relcl | bind,proteins |
R2316 | T3309 | T3308 | prep | to,bind |
R2317 | T3310 | T3312 | det | the,groove |
R2318 | T3311 | T3312 | amod | minor,groove |
R2319 | T3312 | T3309 | pobj | groove,to |
R2320 | T3313 | T3308 | cc | and,bind |
R2321 | T3317 | T3314 | cc | but,bend |
R2322 | T3318 | T3308 | prep | without,bind |
R2323 | T3319 | T3320 | compound | sequence,specificity |
R2325 | T3320 | T3318 | pobj | specificity,without |
R2328 | T3321 | T3322 | punct | ",",are |
R2332 | T3322 | T3322 | ROOT | are,are |
R2336 | T3323 | T3329 | det | the,proteins |
R2340 | T3324 | T3325 | nsubj | ubiquitously,expressed |
R2343 | T3325 | T3329 | amod | expressed,proteins |
R2346 | T3326 | T3329 | nmod | HMG1,proteins |
R2349 | T3327 | T3326 | cc | and,HMG1 |
R2352 | T3328 | T3326 | conj | HMG2,HMG1 |
R2356 | T3329 | T3322 | attr | proteins,are |
R2357 | T3330 | T3332 | nmod | [,] |
R2359 | T3331 | T3332 | nummod | 17,] |
R2362 | T3332 | T3329 | appos | ],proteins |
R2369 | T3333 | T3322 | punct | .,are |
R2373 | T3334 | T3345 | nsubj | Modulation,mediate |
R2377 | T3335 | T3334 | prep | of,Modulation |
R2381 | T3336 | T3337 | compound | DNA,structure |
R2385 | T3337 | T3335 | pobj | structure,of |
R2389 | T3338 | T3334 | agent | by,Modulation |
R2393 | T3339 | T3343 | det | these,proteins |
R2397 | T3340 | T3339 | cc | and,these |
R2401 | T3341 | T3343 | amod | other,proteins |
R2405 | T3342 | T3343 | compound | HMG,proteins |
R2409 | T3343 | T3338 | pobj | proteins,by |
R2412 | T3344 | T3345 | aux | can,mediate |
R2419 | T3345 | T3345 | ROOT | mediate,mediate |
R2423 | T3346 | T3348 | amod | long-range,function |
R2428 | T3347 | T3348 | compound | enhancer,function |
R2432 | T3348 | T3345 | dobj | function,mediate |
R2436 | T3349 | T3348 | prep | on,function |
R2439 | T3350 | T3351 | det | both,DNA |
R2443 | T3351 | T3349 | pobj | DNA,on |
R2447 | T3352 | T3351 | cc | and,DNA |
R2450 | T3353 | T3354 | amod | chromatin-assembled,genes |
R2453 | T3354 | T3351 | conj | genes,DNA |
R2455 | T3355 | T3345 | prep | by,mediate |
R2457 | T3356 | T3355 | pcomp | bringing,by |
R2458 | T3357 | T3356 | advmod | together,bringing |
R2460 | T3358 | T3359 | amod | distant,regions |
R2463 | T3359 | T3356 | dobj | regions,bringing |
R2469 | T3360 | T3359 | prep | of,regions |
R2473 | T3361 | T3360 | pobj | DNA,of |
R2477 | T3362 | T3356 | cc | and,bringing |
R2480 | T3363 | T3364 | amod | associated,factors |
R2484 | T3364 | T3356 | dobj | factors,bringing |
R2487 | T3365 | T3345 | punct | .,mediate |
R2491 | T3366 | T3372 | advmod | Specifically,shown |
R2494 | T3367 | T3372 | punct | ",",shown |
R2498 | T3368 | T3369 | compound | HMG,proteins |
R2502 | T3369 | T3372 | nsubjpass | proteins,shown |
R2506 | T3370 | T3372 | aux | have,shown |
R2510 | T3371 | T3372 | auxpass | been,shown |
R2513 | T3372 | T3372 | ROOT | shown,shown |
R2521 | T3373 | T3374 | aux | to,modulate |
R2524 | T3374 | T3372 | xcomp | modulate,shown |
R2528 | T3375 | T3376 | amod | β-globin,genes |
R2532 | T3376 | T3374 | dobj | genes,modulate |
R2535 | T3377 | T3374 | npadvmod | [,modulate |
R2539 | T3378 | T3377 | nummod | 18,[ |
R2543 | T3379 | T3380 | nummod | 21,] |
R2546 | T3380 | T3377 | appos | ],[ |
R2550 | T3381 | T3372 | punct | .,shown |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1541 | 526-534 | Regulation | denotes | modulate |
T1540 | 535-543 | Protein | denotes | β-globin |
T1539 | 494-506 | Protein | denotes | HMG proteins |
T1538 | 316-328 | Protein | denotes | HMG proteins |
T1537 | 230-239 | Gene_expression | denotes | expressed |
T1536 | 230-239 | Gene_expression | denotes | expressed |
T1535 | 136-140 | Binding | denotes | bind |
T1534 | 249-262 | Protein | denotes | HMG2 proteins |
T1533 | 240-244 | Protein | denotes | HMG1 |
T1532 | 88-119 | Protein | denotes | Sox transcription factor family |
T1531 | 48-51 | Protein | denotes | Sry |
T1530 | 10-26 | Protein | denotes | HMG box proteins |
R765 | T1531 | T1535 | themeOf | Sry,bind |
R766 | T1533 | T1536 | themeOf | HMG1,expressed |
R767 | T1534 | T1537 | themeOf | HMG2 proteins,expressed |
R768 | T1539 | T1541 | causeOf | HMG proteins,modulate |
R769 | T1540 | T1541 | themeOf | β-globin,modulate |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1038 | 526-534 | Regulation | denotes | modulate |
T1037 | 230-239 | Gene_expression | denotes | expressed |
T1036 | 136-140 | Binding | denotes | bind |
T995 | 249-253 | Protein | denotes | HMG2 |
T994 | 240-244 | Protein | denotes | HMG1 |
T993 | 48-51 | Protein | denotes | Sry |
R604 | T993 | T1036 | themeOf | Sry,bind |
R605 | T994 | T1037 | themeOf | HMG1,expressed |
R606 | T995 | T1037 | themeOf | HMG2,expressed |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1143 | 526-534 | Regulation | denotes | modulate |
T1142 | 249-253 | Protein | denotes | HMG2 |
T1141 | 240-244 | Protein | denotes | HMG1 |
T1140 | 230-239 | Gene_expression | denotes | expressed |
T1139 | 136-140 | Binding | denotes | bind |
T1138 | 48-51 | Protein | denotes | Sry |
T1083 | 249-253 | Protein | denotes | HMG2 |
T1082 | 240-244 | Protein | denotes | HMG1 |
T1081 | 48-51 | Protein | denotes | Sry |
R643 | T1138 | T1140 | themeOf | Sry,expressed |
R644 | T1138 | T1139 | themeOf | Sry,bind |
R645 | T1141 | T1139 | themeOf | HMG1,bind |
R646 | T1141 | T1140 | themeOf | HMG1,expressed |
R647 | T1142 | T1139 | themeOf | HMG2,bind |
R648 | T1142 | T1140 | themeOf | HMG2,expressed |