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PMC:1359074 / 446-692 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T357 242-244 JJ denotes ɛy
T356 238-241 DT denotes the
T355 235-237 IN denotes of
T354 228-234 NN denotes region
T353 223-227 NN denotes pair
T352 215-222 NN denotes 36–base
T351 213-214 DT denotes a
T350 206-212 VB denotes define
T349 200-205 NN denotes cells
T348 198-199 -RRB- denotes )
T347 183-198 JJ denotes erythroleukemic
T346 182-183 -LRB- denotes (
T345 176-181 NN denotes GM979
T344 173-175 IN denotes in
T343 166-172 NN denotes assays
T342 153-165 NN denotes Transfection
T341 140-151 NN denotes circulation
T340 134-139 JJ denotes fetal
T339 130-133 DT denotes the
T338 127-129 IN denotes in
T337 119-126 JJ denotes present
T336 115-118 VB denotes are
T335 109-114 NN denotes cells
T334 105-108 JJ denotes red
T333 95-104 JJ denotes nucleated
T332 92-94 IN denotes of
T331 84-91 NN denotes numbers
T330 74-83 VB denotes increased
T329 70-73 CC denotes and
T328 68-69 -COMMA- denotes ,
T327 59-68 VB denotes expressed
T326 46-58 RB denotes persistently
T325 43-45 VB denotes is
T324 36-42 NN denotes globin
T323 33-35 JJ denotes ɛy
T322 31-32 -COMMA- denotes ,
T321 26-31 NN denotes p100H
T320 24-25 -COMMA- denotes ,
T319 19-24 NN denotes mouse
T318 4-18 JJ denotes Sox6-deficient
T317 0-3 DT denotes the
R109 T319 T317 arg1Of mouse,the
R110 T319 T318 arg1Of mouse,Sox6-deficient
R111 T319 T320 arg1Of mouse,","
R112 T321 T320 arg2Of p100H,","
R113 T324 T323 arg1Of globin,ɛy
R114 T324 T325 arg1Of globin,is
R115 T324 T327 arg2Of globin,expressed
R116 T327 T325 arg2Of expressed,is
R117 T327 T326 arg1Of expressed,persistently
R118 T327 T329 arg1Of expressed,and
R120 T329 T322 arg1Of and,","
R121 T329 T328 arg1Of and,","
R122 T331 T330 arg2Of numbers,increased
R123 T331 T332 arg1Of numbers,of
R124 T331 T336 arg1Of numbers,are
R125 T331 T337 arg1Of numbers,present
R126 T335 T332 arg2Of cells,of
R127 T335 T333 arg1Of cells,nucleated
R128 T335 T334 arg1Of cells,red
R129 T336 T329 arg2Of are,and
R130 T337 T336 arg2Of present,are
R131 T337 T338 arg1Of present,in
R132 T341 T338 arg2Of circulation,in
R133 T341 T339 arg1Of circulation,the
R134 T341 T340 arg1Of circulation,fetal
R135 T343 T342 arg1Of assays,Transfection
R136 T343 T344 arg1Of assays,in
R137 T343 T350 arg1Of assays,define
R138 T347 T346 arg2Of erythroleukemic,(
R139 T348 T346 arg3Of ),(
R140 T349 T344 arg2Of cells,in
R141 T349 T345 arg1Of cells,GM979
R142 T349 T346 arg1Of cells,(
R143 T354 T350 arg2Of region,define
R144 T354 T351 arg1Of region,a
R145 T354 T352 arg1Of region,36–base
R146 T354 T353 arg1Of region,pair
R147 T354 T355 arg1Of region,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T151 4-8 Protein denotes Sox6
T152 33-42 Protein denotes ɛy globin
T153 242-244 Protein denotes ɛy

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T476 4-8 http://www.uniprot.org/uniprot/P35712 denotes Sox6

GO-BP

Id Subject Object Predicate Lexical cue
T101 36-42 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

GO-MF

Id Subject Object Predicate Lexical cue
T166 36-42 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

GO-CC

Id Subject Object Predicate Lexical cue
T174 109-114 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T175 200-205 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

simple1

Id Subject Object Predicate Lexical cue
T238 242-244 Protein denotes ɛy
T237 33-42 Protein denotes ɛy globin
T236 4-8 Protein denotes Sox6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T881 4-8 Protein denotes Sox6
T882 33-42 Protein denotes ɛy globin
T883 242-244 Protein denotes ɛy
T896 59-68 Gene_expression denotes expressed
T897 9-18 Negative_regulation denotes deficient
R586 T881 T897 themeOf Sox6,deficient
R587 T882 T896 themeOf ɛy globin,expressed

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T489 4-8 Protein denotes Sox6
T490 33-42 Protein denotes ɛy globin
T491 242-244 Protein denotes ɛy
T505 9-18 Negative_regulation denotes deficient
T506 59-68 Gene_expression denotes expressed
R447 T489 T505 themeOf Sox6,deficient
R448 T490 T506 themeOf ɛy globin,expressed

DLUT931

Id Subject Object Predicate Lexical cue
T520 4-8 Protein denotes Sox6
T521 33-42 Protein denotes ɛy globin
T522 242-244 Protein denotes ɛy
T536 9-18 Negative_regulation denotes deficient
T537 59-68 Gene_expression denotes expressed
R463 T520 T536 themeOf Sox6,deficient
R464 T521 T537 themeOf ɛy globin,expressed

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T871 33-68 Gene_expression denotes ɛy globin is persistently expressed
T866 242-244 Protein denotes ɛy
T839 200-205 Entity denotes cells
T850 26-31 Entity denotes p100H
T853 33-42 Protein denotes ɛy globin
R580 T853 T871 themeOf ɛy globin,ɛy globin is persistently expressed

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T684 242-244 JJ denotes ɛy
T683 238-241 DT denotes the
T682 235-237 IN denotes of
T681 228-234 NN denotes region
T680 223-227 NN denotes pair
T679 218-222 JJ denotes base
T678 215-217 CD denotes 36
T677 213-214 DT denotes a
T676 206-212 VBP denotes define
T675 200-205 NNS denotes cells
T674 198-199 -RRB- denotes )
T673 183-198 JJ denotes erythroleukemic
T672 182-183 -LRB- denotes (
T671 176-181 NNP denotes GM979
T670 173-175 IN denotes in
T669 166-172 NNS denotes assays
T668 153-165 NNP denotes Transfection
T667 151-152 . denotes .
T666 140-151 NN denotes circulation
T665 134-139 JJ denotes fetal
T664 130-133 DT denotes the
T663 127-129 IN denotes in
T662 119-126 JJ denotes present
T661 115-118 VBP denotes are
T660 109-114 NNS denotes cells
T659 105-108 JJ denotes red
T658 95-104 JJ denotes nucleated
T657 92-94 IN denotes of
T656 84-91 NNS denotes numbers
T655 74-83 VBD denotes increased
T654 70-73 CC denotes and
T653 68-69 , denotes ,
T652 59-68 VBN denotes expressed
T651 46-58 RB denotes persistently
T650 43-45 VBZ denotes is
T649 36-42 NN denotes globin
T648 33-35 JJ denotes ɛy
T647 31-32 , denotes ,
T646 26-31 NNP denotes p100H
T645 24-25 , denotes ,
T644 19-24 NN denotes mouse
T643 4-18 JJ denotes Sox6-deficient
T642 0-3 DT denotes the
R338 T642 T644 det the,mouse
R339 T643 T644 amod Sox6-deficient,mouse
R341 T645 T652 punct ",",expressed
R342 T646 T652 nsubjpass p100H,expressed
R343 T647 T652 punct ",",expressed
R344 T648 T649 amod ɛy,globin
R345 T649 T652 nsubjpass globin,expressed
R346 T650 T652 auxpass is,expressed
R347 T651 T652 advmod persistently,expressed
R348 T652 T652 ROOT expressed,expressed
R349 T653 T652 punct ",",expressed
R350 T654 T652 cc and,expressed
R351 T655 T656 amod increased,numbers
R352 T656 T661 nsubj numbers,are
R353 T657 T656 prep of,numbers
R354 T658 T660 amod nucleated,cells
R355 T659 T660 amod red,cells
R356 T660 T657 pobj cells,of
R357 T661 T652 conj are,expressed
R358 T662 T661 acomp present,are
R359 T663 T662 prep in,present
R360 T664 T666 det the,circulation
R361 T665 T666 amod fetal,circulation
R362 T666 T663 pobj circulation,in
R363 T667 T661 punct .,are
R364 T668 T669 compound Transfection,assays
R365 T669 T676 nsubj assays,define
R366 T670 T669 prep in,assays
R367 T671 T670 pobj GM979,in
R368 T672 T673 punct (,erythroleukemic
R369 T673 T671 appos erythroleukemic,GM979
R370 T674 T673 punct ),erythroleukemic
R371 T675 T676 nsubj cells,define
R372 T676 T676 ROOT define,define
R373 T677 T681 det a,region
R374 T678 T681 nummod 36,region
R375 T679 T681 compound base,region
R376 T680 T681 compound pair,region
R377 T681 T676 dobj region,define
R378 T682 T681 prep of,region

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T214 59-68 Gene_expression denotes expressed
T213 59-68 Gene_expression denotes expressed
T212 9-18 Negative_regulation denotes deficient
T211 33-42 Protein denotes ɛy globin
T210 26-31 Protein denotes p100H
T209 4-8 Protein denotes Sox6
R33 T209 T212 themeOf Sox6,deficient
R34 T210 T213 themeOf p100H,expressed
R35 T211 T214 themeOf ɛy globin,expressed

testone

Id Subject Object Predicate Lexical cue
T25 4-8 Protein denotes Sox6
T26 33-42 Protein denotes ɛy globin
T27 242-244 Protein denotes ɛy
T40 9-18 Negative_regulation denotes deficient
T41 59-68 Gene_expression denotes expressed
R2 T25 T40 themeOf Sox6,deficient
R3 T26 T41 themeOf ɛy globin,expressed

test3

Id Subject Object Predicate Lexical cue
T50 4-8 Protein denotes Sox6
T51 33-42 Protein denotes ɛy globin
T52 242-244 Protein denotes ɛy
T70 4-8 Protein denotes Sox6
T71 33-42 Protein denotes ɛy globin
T72 59-68 Gene_expression denotes expressed
T73 242-244 Protein denotes ɛy
R12 T71 T72 themeOf ɛy globin,expressed