> top > docs > PMC:1359074 > spans > 42689-43058 > annotations

PMC:1359074 / 42689-43058 JSONTXT

Annnotations TAB JSON ListView MergeView

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T20466 365-368 NN denotes min
T20465 362-364 CD denotes 10
T20464 358-361 IN denotes for
T20463 354-357 NN denotes ice
T20462 351-353 IN denotes on
T20461 341-350 VB denotes incubated
T20460 337-340 CC denotes and
T20459 335-336 -COMMA- denotes ,
T20458 325-335 NN denotes inhibitors
T20457 316-324 NN denotes protease
T20456 305-315 VB denotes containing
T20455 298-304 NN denotes buffer
T20454 292-297 NN denotes lysis
T20453 288-291 NN denotes SDS
T20452 286-287 DT denotes a
T20451 283-285 IN denotes in
T20450 271-282 VB denotes resuspended
T20449 269-270 -COMMA- denotes ,
T20448 267-269 NN denotes °C
T20447 265-266 CD denotes 4
T20446 262-264 IN denotes at
T20445 247-261 NN denotes centrifugation
T20444 244-246 IN denotes by
T20443 234-243 VB denotes collected
T20442 232-233 -COMMA- denotes ,
T20441 222-232 NN denotes inhibitors
T20440 213-221 NN denotes protease
T20439 202-212 VB denotes containing
T20438 197-201 NN denotes EDTA
T20437 195-196 NN denotes %
T20436 192-195 CD denotes 0.1
T20435 187-191 IN denotes with
T20434 178-186 NN denotes solution
T20433 173-177 NN denotes salt
T20432 164-172 JJ denotes balanced
T20431 162-163 POS denotes '
T20430 157-162 NNP denotes Hanks
T20429 154-156 CD denotes 1×
T20428 145-153 JJ denotes ice-cold
T20427 142-144 IN denotes in
T20426 135-141 VB denotes rinsed
T20425 133-134 -COMMA- denotes ,
T20424 131-133 NN denotes °C
T20423 128-130 CD denotes 37
T20422 125-127 IN denotes at
T20421 121-124 NN denotes min
T20420 118-120 CD denotes 10
T20419 114-117 IN denotes for
T20418 101-113 NN denotes formaldehyde
T20417 99-100 NN denotes %
T20416 98-99 CD denotes 1
T20415 93-97 IN denotes with
T20414 85-92 VB denotes treated
T20413 80-84 VB denotes were
T20412 75-79 NN denotes mice
T20411 72-74 JJ denotes WT
T20410 63-71 JJ denotes 15.5-dpc
T20409 57-62 CD denotes three
T20408 52-56 IN denotes from
T20407 46-51 NN denotes cells
T20406 40-45 NN denotes liver
T20405 34-39 JJ denotes fetal
T20404 31-33 CC denotes or
T20403 29-30 -RRB- denotes )
T20402 26-29 CD denotes 107
T20401 24-25 NN denotes ×
T20400 22-23 CD denotes 4
T20399 21-22 -LRB- denotes (
T20398 15-20 NN denotes cells
T20397 11-14 NN denotes MEL
T20396 6-10 IN denotes from
T20395 0-5 NN denotes Cells
R14499 T20395 T20396 arg1Of Cells,from
R14500 T20395 T20413 arg1Of Cells,were
R14501 T20395 T20414 arg2Of Cells,treated
R14502 T20398 T20397 arg1Of cells,MEL
R14503 T20398 T20399 arg1Of cells,(
R14504 T20398 T20404 arg1Of cells,or
R14505 T20401 T20399 arg2Of ×,(
R14506 T20401 T20400 arg1Of ×,4
R14507 T20401 T20402 arg1Of ×,107
R14508 T20403 T20399 arg3Of ),(
R14509 T20404 T20396 arg2Of or,from
R14510 T20407 T20404 arg2Of cells,or
R14511 T20407 T20405 arg1Of cells,fetal
R14512 T20407 T20406 arg1Of cells,liver
R14513 T20407 T20408 arg1Of cells,from
R14514 T20412 T20408 arg2Of mice,from
R14515 T20412 T20409 arg1Of mice,three
R14516 T20412 T20410 arg1Of mice,15.5-dpc
R14517 T20412 T20411 arg1Of mice,WT
R14518 T20414 T20413 arg2Of treated,were
R14519 T20414 T20415 arg1Of treated,with
R14520 T20416 T20417 arg1Of 1,%
R14521 T20418 T20415 arg2Of formaldehyde,with
R14522 T20418 T20416 arg1Of formaldehyde,1
R14523 T20418 T20419 arg1Of formaldehyde,for
R14524 T20421 T20419 arg2Of min,for
R14525 T20421 T20420 arg1Of min,10
R14526 T20421 T20422 arg1Of min,at
R14527 T20421 T20425 arg1Of min,","
R14528 T20421 T20426 arg2Of min,rinsed
R14529 T20421 T20435 arg1Of min,with
R14530 T20424 T20422 arg2Of °C,at
R14531 T20424 T20423 arg1Of °C,37
R14532 T20426 T20427 arg1Of rinsed,in
R14533 T20430 T20431 arg2Of Hanks,'
R14534 T20434 T20427 arg2Of solution,in
R14535 T20434 T20428 arg1Of solution,ice-cold
R14536 T20434 T20429 arg1Of solution,1×
R14537 T20434 T20431 arg1Of solution,'
R14538 T20434 T20432 arg1Of solution,balanced
R14539 T20434 T20433 arg1Of solution,salt
R14540 T20436 T20437 arg1Of 0.1,%
R14541 T20438 T20435 arg2Of EDTA,with
R14542 T20438 T20436 arg1Of EDTA,0.1
R14543 T20438 T20439 arg1Of EDTA,containing
R14544 T20441 T20439 arg2Of inhibitors,containing
R14545 T20441 T20440 arg1Of inhibitors,protease
R14546 T20441 T20442 arg1Of inhibitors,","
R14547 T20441 T20443 arg2Of inhibitors,collected
R14548 T20441 T20450 arg2Of inhibitors,resuspended
R14549 T20441 T20461 arg2Of inhibitors,incubated
R14550 T20445 T20443 arg1Of centrifugation,collected
R14551 T20445 T20444 arg2Of centrifugation,by
R14552 T20445 T20446 arg1Of centrifugation,at
R14553 T20448 T20446 arg2Of °C,at
R14554 T20448 T20447 arg1Of °C,4
R14555 T20450 T20451 arg1Of resuspended,in
R14556 T20450 T20460 arg1Of resuspended,and
R14557 T20455 T20451 arg2Of buffer,in
R14558 T20455 T20452 arg1Of buffer,a
R14559 T20455 T20453 arg1Of buffer,SDS
R14560 T20455 T20454 arg1Of buffer,lysis
R14561 T20455 T20456 arg1Of buffer,containing
R14562 T20458 T20456 arg2Of inhibitors,containing
R14563 T20458 T20457 arg1Of inhibitors,protease
R14564 T20460 T20449 arg1Of and,","
R14565 T20460 T20459 arg1Of and,","
R14566 T20461 T20460 arg2Of incubated,and
R14567 T20461 T20462 arg1Of incubated,on
R14568 T20461 T20464 arg1Of incubated,for
R14569 T20463 T20462 arg2Of ice,on
R14570 T20466 T20464 arg2Of min,for
R14571 T20466 T20465 arg1Of min,10

UBERON-AE

Id Subject Object Predicate Lexical cue
T20339 40-45 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver

GO-BP

Id Subject Object Predicate Lexical cue
T20352 292-297 http://purl.obolibrary.org/obo/GO_0019835 denotes lysis

GO-CC

Id Subject Object Predicate Lexical cue
T20363 46-51 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T20362 15-20 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T20343 0-369 Sentence denotes Cells from MEL cells (4 × 107) or fetal liver cells from three 15.5-dpc WT mice were treated with 1% formaldehyde for 10 min at 37 °C, rinsed in ice-cold 1× Hanks' balanced salt solution with 0.1% EDTA containing protease inhibitors, collected by centrifugation at 4 °C, resuspended in a SDS lysis buffer containing protease inhibitors, and incubated on ice for 10 min.
T332 0-369 Sentence denotes Cells from MEL cells (4 × 107) or fetal liver cells from three 15.5-dpc WT mice were treated with 1% formaldehyde for 10 min at 37 °C, rinsed in ice-cold 1× Hanks' balanced salt solution with 0.1% EDTA containing protease inhibitors, collected by centrifugation at 4 °C, resuspended in a SDS lysis buffer containing protease inhibitors, and incubated on ice for 10 min.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T21015 57-79 Protein denotes three 15.5-dpc WT mice
T21010 145-153 Entity denotes ice-cold
T21009 351-357 Entity denotes on ice
T21007 98-124 Entity denotes 1% formaldehyde for 10 min
T21002 316-335 Protein denotes protease inhibitors
T21001 197-201 Entity denotes EDTA
T20993 286-336 Protein denotes a SDS lysis buffer containing protease inhibitors,
T20992 192-232 Protein denotes 0.1% EDTA containing protease inhibitors

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T20767 368-369 . denotes .
T20766 365-368 NN denotes min
T20765 362-364 CD denotes 10
T20764 358-361 IN denotes for
T20763 354-357 NN denotes ice
T20762 351-353 IN denotes on
T20761 341-350 VBD denotes incubated
T20760 337-340 CC denotes and
T20759 335-336 , denotes ,
T20758 325-335 NNS denotes inhibitors
T20757 316-324 NN denotes protease
T20756 305-315 VBG denotes containing
T20755 298-304 NN denotes buffer
T20754 292-297 NN denotes lysis
T20753 288-291 NNP denotes SDS
T20752 286-287 DT denotes a
T20751 283-285 IN denotes in
T20750 271-282 VBD denotes resuspended
T20749 269-270 , denotes ,
T20748 268-269 NNP denotes C
T20747 267-268 CD denotes °
T20746 265-266 CD denotes 4
T20745 262-264 IN denotes at
T20744 247-261 NN denotes centrifugation
T20743 244-246 IN denotes by
T20742 234-243 VBN denotes collected
T20741 232-233 , denotes ,
T20740 222-232 NNS denotes inhibitors
T20739 213-221 NN denotes protease
T20738 202-212 VBG denotes containing
T20737 197-201 NNP denotes EDTA
T20736 195-196 NN denotes %
T20735 192-195 CD denotes 0.1
T20734 187-191 IN denotes with
T20733 178-186 NN denotes solution
T20732 173-177 NN denotes salt
T20731 164-172 JJ denotes balanced
T20730 162-163 POS denotes '
T20729 157-162 NNP denotes Hanks
T20728 155-156 CD denotes ×
T20727 154-155 CD denotes 1
T20726 145-153 JJ denotes ice-cold
T20725 142-144 IN denotes in
T20724 135-141 VBD denotes rinsed
T20723 133-134 , denotes ,
T20722 132-133 NNP denotes C
T20721 131-132 CD denotes °
T20720 128-130 CD denotes 37
T20719 125-127 IN denotes at
T20718 121-124 NN denotes min
T20717 118-120 CD denotes 10
T20716 114-117 IN denotes for
T20715 101-113 NN denotes formaldehyde
T20714 99-100 NN denotes %
T20713 98-99 CD denotes 1
T20712 93-97 IN denotes with
T20711 85-92 VBN denotes treated
T20710 80-84 VBD denotes were
T20709 75-79 NNS denotes mice
T20708 72-74 NNP denotes WT
T20707 63-71 JJ denotes 15.5-dpc
T20706 57-62 CD denotes three
T20705 52-56 IN denotes from
T20704 46-51 NNS denotes cells
T20703 40-45 NN denotes liver
T20702 34-39 JJ denotes fetal
T20701 31-33 CC denotes or
T20700 29-30 -RRB- denotes )
T20699 26-29 CD denotes 107
T20698 24-25 CD denotes ×
T20697 22-23 CD denotes 4
T20696 21-22 -LRB- denotes (
T20695 15-20 NNS denotes cells
T20694 11-14 NNP denotes MEL
T20693 6-10 IN denotes from
T20692 0-5 NNS denotes Cells
R14790 T20692 T20711 nsubjpass Cells,treated
R14791 T20693 T20692 prep from,Cells
R14792 T20694 T20695 compound MEL,cells
R14793 T20695 T20693 pobj cells,from
R14794 T20696 T20695 punct (,cells
R14795 T20697 T20699 nummod 4,107
R14796 T20698 T20699 nummod ×,107
R14797 T20699 T20695 appos 107,cells
R14798 T20700 T20699 punct ),107
R14799 T20701 T20699 cc or,107
R14800 T20702 T20704 amod fetal,cells
R14801 T20703 T20704 compound liver,cells
R14802 T20704 T20711 nsubjpass cells,treated
R14803 T20705 T20704 prep from,cells
R14804 T20706 T20709 nummod three,mice
R14805 T20707 T20709 amod 15.5-dpc,mice
R14806 T20708 T20709 compound WT,mice
R14807 T20709 T20705 pobj mice,from
R14808 T20710 T20711 auxpass were,treated
R14809 T20711 T20711 ROOT treated,treated
R14810 T20712 T20711 prep with,treated
R14811 T20713 T20714 nummod 1,%
R14812 T20714 T20715 compound %,formaldehyde
R14813 T20715 T20712 pobj formaldehyde,with
R14814 T20716 T20711 prep for,treated
R14815 T20717 T20718 nummod 10,min
R14816 T20718 T20716 pobj min,for
R14817 T20719 T20711 prep at,treated
R14818 T20720 T20721 nummod 37,°
R14819 T20721 T20722 nummod °,C
R14820 T20722 T20719 pobj C,at
R14821 T20723 T20711 punct ",",treated
R14822 T20724 T20711 conj rinsed,treated
R14823 T20725 T20724 prep in,rinsed
R14824 T20726 T20729 amod ice-cold,Hanks
R14825 T20727 T20728 nummod 1,×
R14826 T20728 T20729 compound ×,Hanks
R14827 T20729 T20733 poss Hanks,solution
R14828 T20730 T20729 case ',Hanks
R14829 T20731 T20733 amod balanced,solution
R14830 T20732 T20733 compound salt,solution
R14831 T20733 T20725 pobj solution,in
R14832 T20734 T20733 prep with,solution
R14833 T20735 T20736 nummod 0.1,%
R14834 T20736 T20737 compound %,EDTA
R14835 T20737 T20738 nsubj EDTA,containing
R14836 T20738 T20734 pcomp containing,with
R14837 T20739 T20740 compound protease,inhibitors
R14838 T20740 T20738 dobj inhibitors,containing
R14839 T20741 T20740 punct ",",inhibitors
R14840 T20742 T20740 acl collected,inhibitors
R14841 T20743 T20742 agent by,collected
R14842 T20744 T20743 pobj centrifugation,by
R14843 T20745 T20742 prep at,collected
R14844 T20746 T20747 nummod 4,°
R14845 T20747 T20748 nummod °,C
R14846 T20748 T20745 pobj C,at
R14847 T20749 T20748 punct ",",C
R14848 T20750 T20724 conj resuspended,rinsed
R14849 T20751 T20750 prep in,resuspended
R14850 T20752 T20755 det a,buffer
R14851 T20753 T20755 compound SDS,buffer
R14852 T20754 T20755 compound lysis,buffer
R14853 T20755 T20751 pobj buffer,in
R14854 T20756 T20755 acl containing,buffer
R14855 T20757 T20758 compound protease,inhibitors
R14856 T20758 T20756 dobj inhibitors,containing
R14857 T20759 T20750 punct ",",resuspended
R14858 T20760 T20750 cc and,resuspended
R14859 T20761 T20750 conj incubated,resuspended
R14860 T20762 T20761 prep on,incubated
R14861 T20763 T20762 pobj ice,on
R14862 T20764 T20761 prep for,incubated
R14863 T20765 T20766 nummod 10,min
R14864 T20766 T20764 pobj min,for
R14865 T20767 T20711 punct .,treated