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PMC:1359074 / 41503-41643 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T19781 134-139 NN denotes MgCl2
T19780 131-133 NN denotes mM
T19779 127-130 CD denotes 0.6
T19778 125-126 -COMMA- denotes ,
T19777 122-125 NN denotes DTT
T19776 119-121 NN denotes mM
T19775 114-118 CD denotes 0.25
T19774 112-113 -COMMA- denotes ,
T19773 108-112 NN denotes EDTA
T19772 105-107 NN denotes mM
T19771 101-104 CD denotes 0.1
T19770 99-100 -COMMA- denotes ,
T19769 98-99 -RRB- denotes )
T19768 97-98 CD denotes 7
T19767 94-96 NN denotes pH
T19766 93-94 -LRB- denotes (
T19765 87-92 NN denotes HEPES
T19764 84-86 NN denotes mM
T19763 81-83 CD denotes 10
T19762 79-80 -COMMA- denotes ,
T19761 78-79 -RRB- denotes )
T19760 73-78 NN denotes dG-dC
T19759 72-73 -LRB- denotes (
T19758 67-71 NN denotes poly
T19757 64-66 CC denotes or
T19756 62-63 -RRB- denotes )
T19755 57-62 NN denotes dI-dC
T19754 56-57 -LRB- denotes (
T19753 51-55 NN denotes poly
T19752 45-50 NN denotes ng/μl
T19751 42-44 CD denotes 50
T19750 40-41 -COMMA- denotes ,
T19749 37-40 NN denotes BSA
T19748 31-36 NN denotes ng/μl
T19747 27-30 CD denotes 200
T19746 25-26 -COMMA- denotes ,
T19745 17-25 NN denotes glycerol
T19744 15-16 NN denotes %
T19743 13-15 CD denotes 10
T19742 11-12 -COMMA- denotes ,
T19741 7-11 NN denotes NaCl
T19740 4-6 NN denotes mM
T19739 0-3 CD denotes 100
R13980 T19739 T19740 arg1Of 100,mM
R13981 T19741 T19739 arg1Of NaCl,100
R13982 T19741 T19742 arg1Of NaCl,","
R13983 T19742 T19746 arg1Of ",",","
R13984 T19743 T19744 arg1Of 10,%
R13985 T19745 T19742 arg2Of glycerol,","
R13986 T19745 T19743 arg1Of glycerol,10
R13987 T19746 T19750 arg1Of ",",","
R13988 T19749 T19746 arg2Of BSA,","
R13989 T19749 T19747 arg1Of BSA,200
R13990 T19749 T19748 arg1Of BSA,ng/μl
R13991 T19750 T19757 arg1Of ",",or
R13992 T19753 T19750 arg2Of poly,","
R13993 T19753 T19751 arg1Of poly,50
R13994 T19753 T19752 arg1Of poly,ng/μl
R13995 T19753 T19754 arg1Of poly,(
R13996 T19755 T19754 arg2Of dI-dC,(
R13997 T19756 T19754 arg3Of ),(
R13998 T19757 T19770 arg1Of or,","
R13999 T19758 T19759 arg1Of poly,(
R14000 T19758 T19762 arg1Of poly,","
R14001 T19760 T19759 arg2Of dG-dC,(
R14002 T19761 T19759 arg3Of ),(
R14003 T19762 T19757 arg2Of ",",or
R14004 T19763 T19764 arg1Of 10,mM
R14005 T19765 T19762 arg2Of HEPES,","
R14006 T19765 T19763 arg1Of HEPES,10
R14007 T19765 T19766 arg1Of HEPES,(
R14008 T19767 T19766 arg2Of pH,(
R14009 T19767 T19768 arg1Of pH,7
R14010 T19769 T19766 arg3Of ),(
R14011 T19771 T19772 arg1Of 0.1,mM
R14012 T19773 T19770 arg2Of EDTA,","
R14013 T19773 T19771 arg1Of EDTA,0.1
R14014 T19773 T19774 arg1Of EDTA,","
R14015 T19773 T19778 arg1Of EDTA,","
R14016 T19775 T19776 arg1Of 0.25,mM
R14017 T19777 T19774 arg2Of DTT,","
R14018 T19777 T19775 arg1Of DTT,0.25
R14019 T19779 T19780 arg1Of 0.6,mM
R14020 T19781 T19778 arg2Of MgCl2,","
R14021 T19781 T19779 arg1Of MgCl2,0.6

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T19671 37-40 Protein denotes BSA

sentences

Id Subject Object Predicate Lexical cue
T19651 0-140 Sentence denotes 100 mM NaCl, 10% glycerol, 200 ng/μl BSA, 50 ng/μl poly (dI-dC) or poly (dG-dC), 10 mM HEPES (pH 7), 0.1 mM EDTA, 0.25 mM DTT, 0.6 mM MgCl2.
T319 0-140 Sentence denotes 100 mM NaCl, 10% glycerol, 200 ng/μl BSA, 50 ng/μl poly (dI-dC) or poly (dG-dC), 10 mM HEPES (pH 7), 0.1 mM EDTA, 0.25 mM DTT, 0.6 mM MgCl2.

simple1

Id Subject Object Predicate Lexical cue
T19690 37-40 Protein denotes BSA

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T20313 37-40 Protein denotes BSA

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T19962 37-40 Protein denotes BSA

DLUT931

Id Subject Object Predicate Lexical cue
T19974 37-40 Protein denotes BSA

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T20304 73-78 Protein denotes dG-dC
T20297 13-25 Entity denotes 10% glycerol
T20294 101-126 Entity denotes 0.1 mM EDTA, 0.25 mM DTT,
T20290 37-41 Protein denotes BSA,
T20289 51-63 Entity denotes poly (dI-dC)
T20287 67-92 Entity denotes poly (dG-dC), 10 mM HEPES
T20284 114-125 Entity denotes 0.25 mM DTT
T20283 67-80 Entity denotes poly (dG-dC),
T20282 0-26 Entity denotes 100 mM NaCl, 10% glycerol,

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T20079 139-140 . denotes .
T20078 134-139 NNP denotes MgCl2
T20077 131-133 NNP denotes mM
T20076 127-130 CD denotes 0.6
T20075 125-126 , denotes ,
T20074 122-125 NNP denotes DTT
T20073 119-121 NNP denotes mM
T20072 114-118 CD denotes 0.25
T20071 112-113 , denotes ,
T20070 108-112 NNP denotes EDTA
T20069 105-107 NNP denotes mM
T20068 101-104 CD denotes 0.1
T20067 99-100 , denotes ,
T20066 98-99 -RRB- denotes )
T20065 97-98 CD denotes 7
T20064 94-96 NN denotes pH
T20063 93-94 -LRB- denotes (
T20062 87-92 NNS denotes HEPES
T20061 84-86 NN denotes mM
T20060 81-83 CD denotes 10
T20059 79-80 , denotes ,
T20058 78-79 -RRB- denotes )
T20057 73-78 JJ denotes dG-dC
T20056 72-73 -LRB- denotes (
T20055 67-71 NN denotes poly
T20054 64-66 CC denotes or
T20053 62-63 -RRB- denotes )
T20052 57-62 JJ denotes dI-dC
T20051 56-57 -LRB- denotes (
T20050 51-55 NN denotes poly
T20049 48-50 NN denotes μl
T20048 47-48 NN denotes /
T20047 45-47 NN denotes ng
T20046 42-44 CD denotes 50
T20045 40-41 , denotes ,
T20044 37-40 NNP denotes BSA
T20043 34-36 NN denotes μl
T20042 33-34 NN denotes /
T20041 31-33 NN denotes ng
T20040 27-30 CD denotes 200
T20039 25-26 , denotes ,
T20038 17-25 NN denotes glycerol
T20037 15-16 NN denotes %
T20036 13-15 CD denotes 10
T20035 11-12 , denotes ,
T20034 7-11 NNP denotes NaCl
T20033 4-6 NNP denotes mM
T20032 0-3 CD denotes 100
R14246 T20032 T20034 nummod 100,NaCl
R14247 T20033 T20034 compound mM,NaCl
R14249 T20035 T20034 punct ",",NaCl
R14250 T20036 T20037 nummod 10,%
R14251 T20037 T20038 compound %,glycerol
R14252 T20038 T20034 appos glycerol,NaCl
R14253 T20039 T20038 punct ",",glycerol
R14254 T20040 T20041 nummod 200,ng
R14255 T20041 T20050 npadvmod ng,poly
R14256 T20042 T20044 nmod /,BSA
R14257 T20043 T20044 compound μl,BSA
R14258 T20044 T20050 nmod BSA,poly
R14259 T20045 T20050 punct ",",poly
R14260 T20046 T20047 nummod 50,ng
R14261 T20047 T20050 compound ng,poly
R14262 T20048 T20050 compound /,poly
R14263 T20049 T20050 compound μl,poly
R14265 T20051 T20050 punct (,poly
R14266 T20052 T20050 appos dI-dC,poly
R14267 T20053 T20052 punct ),dI-dC
R14268 T20054 T20052 cc or,dI-dC
R14269 T20055 T20055 ROOT poly,poly
R14270 T20056 T20057 punct (,dG-dC
R14271 T20057 T20055 appos dG-dC,poly
R14272 T20058 T20057 punct ),dG-dC
R14273 T20059 T20055 punct ",",poly
R14274 T20060 T20062 nummod 10,HEPES
R14275 T20061 T20062 compound mM,HEPES
R14276 T20062 T20055 appos HEPES,poly
R14277 T20063 T20064 punct (,pH
R14278 T20064 T20062 parataxis pH,HEPES
R14279 T20065 T20064 nummod 7,pH
R14280 T20066 T20064 punct ),pH
R14281 T20067 T20064 punct ",",pH
R14282 T20068 T20070 nummod 0.1,EDTA
R14283 T20069 T20070 compound mM,EDTA
R14284 T20070 T20064 appos EDTA,pH
R14285 T20071 T20070 punct ",",EDTA
R14286 T20072 T20074 nummod 0.25,DTT
R14287 T20073 T20074 compound mM,DTT
R14288 T20074 T20070 appos DTT,EDTA
R14289 T20075 T20074 punct ",",DTT
R14290 T20076 T20078 nummod 0.6,MgCl2
R14291 T20077 T20078 compound mM,MgCl2
R14292 T20078 T20074 appos MgCl2,DTT

testone

Id Subject Object Predicate Lexical cue
T19632 37-40 Protein denotes BSA

test3

Id Subject Object Predicate Lexical cue
T19644 37-40 Protein denotes BSA
T19638 37-40 Protein denotes BSA