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PMC:1359074 / 40781-41216 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
16462943-11818535-85761029 116-117 11818535 denotes 7
T70190 116-117 11818535 denotes 7

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T19503 433-434 -RRB- denotes )
T19502 427-433 NNP denotes States
T19501 420-426 NNP denotes United
T19500 418-419 -COMMA- denotes ,
T19499 414-418 NNP denotes York
T19498 410-413 NNP denotes New
T19497 408-409 -COMMA- denotes ,
T19496 402-408 NNP denotes Placid
T19495 397-401 NNP denotes Lake
T19494 396-397 -LRB- denotes (
T19493 382-395 NNP denotes Biotechnology
T19492 374-381 NNP denotes Upstate
T19491 369-373 IN denotes from
T19490 360-368 VB denotes obtained
T19463 181-194 NNP denotes Biotechnology
T19462 176-180 NNP denotes Cruz
T19461 170-175 NNP denotes Santa
T19460 168-169 -COMMA- denotes ,
T19459 167-168 NNP denotes X
T19458 158-166 NN denotes sc-17332
T19457 154-157 NN denotes No.
T19456 146-153 NNP denotes Catalog
T19455 145-146 -LRB- denotes (
T19454 136-144 VB denotes obtained
T19453 123-135 RB denotes commercially
T19452 120-122 CC denotes or
T19451 118-119 -RRB- denotes )
T19450 117-118 -RRB- denotes ]
T19449 116-117 CD denotes 7
T19448 115-116 -LRB- denotes [
T19447 108-114 NNP denotes France
T19446 106-107 -COMMA- denotes ,
T19445 99-106 NNP denotes Pasteur
T19444 93-98 NNP denotes Louis
T19443 82-92 NNP denotes Université
T19442 81-82 -LRB- denotes (
T19441 75-80 NNP denotes Lalli
T19440 70-74 NNP denotes Enzo
T19439 66-69 NNP denotes Dr.
T19438 63-65 IN denotes by
T19437 54-62 VB denotes provided
T19436 47-53 RB denotes kindly
T19435 40-46 CC denotes either
T19434 35-39 VB denotes were
T19433 29-34 NN denotes study
T19432 24-28 DT denotes this
T19431 21-23 IN denotes in
T19430 16-20 VB denotes used
T19429 5-15 NN denotes antibodies
T19428 0-4 NN denotes Sox6
T19489 356-359 VB denotes was
T19488 347-355 NN denotes antibody
T19487 343-346 NN denotes IgG
T19486 336-342 NN denotes rabbit
T19485 329-335 NNP denotes Normal
T19484 317-328 NNP denotes Invitrogen.
T19483 312-316 IN denotes from
T19482 302-311 VB denotes purchased
T19481 298-301 VB denotes was
T19480 289-297 NN denotes antibody
T19479 283-288 NN denotes c-Myc
T19478 274-282 JJ denotes results.
T19477 266-273 JJ denotes similar
T19476 256-265 VB denotes generated
T19475 245-255 NN denotes antibodies
T19474 240-244 NN denotes Sox6
T19473 236-239 DT denotes All
T19472 233-234 -RRB- denotes )
T19471 227-233 NNP denotes States
T19470 220-226 NNP denotes United
T19469 218-219 -COMMA- denotes ,
T19468 208-218 NNP denotes California
T19467 206-207 -COMMA- denotes ,
T19466 202-206 NNP denotes Cruz
T19465 196-201 NNP denotes Santa
T19464 194-195 -COMMA- denotes ,
R13772 T19429 T19428 arg1Of antibodies,Sox6
R13773 T19429 T19430 arg2Of antibodies,used
R13774 T19429 T19434 arg1Of antibodies,were
R13775 T19429 T19437 arg2Of antibodies,provided
R13776 T19429 T19454 arg2Of antibodies,obtained
R13777 T19430 T19431 arg1Of used,in
R13778 T19433 T19431 arg2Of study,in
R13779 T19433 T19432 arg1Of study,this
R13780 T19437 T19436 arg1Of provided,kindly
R13781 T19437 T19452 arg1Of provided,or
R13782 T19441 T19437 arg1Of Lalli,provided
R13783 T19441 T19438 arg2Of Lalli,by
R13784 T19441 T19439 arg1Of Lalli,Dr.
R13785 T19441 T19440 arg1Of Lalli,Enzo
R13786 T19441 T19442 arg1Of Lalli,(
R13787 T19445 T19443 arg1Of Pasteur,Université
R13788 T19445 T19444 arg1Of Pasteur,Louis
R13789 T19445 T19446 arg1Of Pasteur,","
R13790 T19446 T19442 arg2Of ",",(
R13791 T19447 T19446 arg2Of France,","
R13792 T19447 T19448 arg1Of France,[
R13793 T19449 T19448 arg2Of 7,[
R13794 T19450 T19448 arg3Of ],[
R13795 T19451 T19442 arg3Of ),(
R13796 T19452 T19434 arg2Of or,were
R13797 T19452 T19435 arg1Of or,either
R13798 T19454 T19452 arg2Of obtained,or
R13799 T19454 T19453 arg1Of obtained,commercially
R13800 T19454 T19455 arg1Of obtained,(
R13801 T19459 T19455 arg2Of X,(
R13802 T19459 T19456 arg1Of X,Catalog
R13803 T19459 T19457 arg1Of X,No.
R13804 T19459 T19458 arg1Of X,sc-17332
R13805 T19459 T19460 arg1Of X,","
R13806 T19459 T19469 arg1Of X,","
R13807 T19463 T19460 arg2Of Biotechnology,","
R13808 T19463 T19461 arg1Of Biotechnology,Santa
R13809 T19463 T19462 arg1Of Biotechnology,Cruz
R13810 T19463 T19464 arg1Of Biotechnology,","
R13811 T19466 T19465 arg1Of Cruz,Santa
R13812 T19466 T19467 arg1Of Cruz,","
R13813 T19467 T19464 arg2Of ",",","
R13814 T19468 T19467 arg2Of California,","
R13815 T19471 T19469 arg2Of States,","
R13816 T19471 T19470 arg1Of States,United
R13817 T19472 T19455 arg3Of ),(
R13818 T19474 T19473 arg1Of Sox6,All
R13819 T19474 T19481 arg1Of Sox6,was
R13820 T19474 T19482 arg2Of Sox6,purchased
R13821 T19475 T19476 arg1Of antibodies,generated
R13822 T19480 T19476 arg2Of antibody,generated
R13823 T19480 T19477 arg1Of antibody,similar
R13824 T19480 T19478 arg1Of antibody,results.
R13825 T19480 T19479 arg1Of antibody,c-Myc
R13826 T19482 T19476 arg3Of purchased,generated
R13827 T19482 T19481 arg2Of purchased,was
R13828 T19482 T19483 arg1Of purchased,from
R13829 T19485 T19483 arg2Of Normal,from
R13830 T19485 T19484 arg1Of Normal,Invitrogen.
R13831 T19488 T19486 arg1Of antibody,rabbit
R13832 T19488 T19487 arg1Of antibody,IgG
R13833 T19488 T19489 arg1Of antibody,was
R13834 T19488 T19490 arg2Of antibody,obtained
R13835 T19490 T19481 modOf obtained,was
R13836 T19490 T19489 arg2Of obtained,was
R13837 T19490 T19491 arg1Of obtained,from
R13838 T19493 T19491 arg2Of Biotechnology,from
R13839 T19493 T19492 arg1Of Biotechnology,Upstate
R13840 T19493 T19494 arg1Of Biotechnology,(
R13841 T19496 T19494 arg2Of Placid,(
R13842 T19496 T19495 arg1Of Placid,Lake
R13843 T19496 T19497 arg1Of Placid,","
R13844 T19496 T19500 arg1Of Placid,","
R13845 T19499 T19497 arg2Of York,","
R13846 T19499 T19498 arg1Of York,New
R13847 T19502 T19500 arg2Of States,","
R13848 T19502 T19501 arg1Of States,United
R13849 T19503 T19494 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T19410 283-288 Protein denotes c-Myc
T19409 240-244 Protein denotes Sox6
T19408 0-4 Protein denotes Sox6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T19505 240-244 http://www.uniprot.org/uniprot/P35712 denotes Sox6
T19504 0-4 http://www.uniprot.org/uniprot/P35712 denotes Sox6

GO-MF

Id Subject Object Predicate Lexical cue
T19414 347-355 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T19413 289-297 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T19412 245-255 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies
T19411 5-15 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies

GO-CC

Id Subject Object Predicate Lexical cue
T19423 343-355 http://purl.obolibrary.org/obo/GO_0071736 denotes IgG antibody
T19422 347-355 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody
T19421 289-297 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody
T19420 245-255 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T19419 5-15 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T19418 347-355 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T19417 289-297 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T19416 245-255 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies
T19415 5-15 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies

sentences

Id Subject Object Predicate Lexical cue
T19404 236-435 Sentence denotes All Sox6 antibodies generated similar results. c-Myc antibody was purchased from Invitrogen. Normal rabbit IgG antibody was obtained from Upstate Biotechnology (Lake Placid, New York, United States).
T19403 0-235 Sentence denotes Sox6 antibodies used in this study were either kindly provided by Dr. Enzo Lalli (Université Louis Pasteur, France [7]) or commercially obtained (Catalog No. sc-17332 X, Santa Cruz Biotechnology, Santa Cruz, California, United States).
T313 0-235 Sentence denotes Sox6 antibodies used in this study were either kindly provided by Dr. Enzo Lalli (Université Louis Pasteur, France [7]) or commercially obtained (Catalog No. sc-17332 X, Santa Cruz Biotechnology, Santa Cruz, California, United States).
T314 236-328 Sentence denotes All Sox6 antibodies generated similar results. c-Myc antibody was purchased from Invitrogen.
T315 329-435 Sentence denotes Normal rabbit IgG antibody was obtained from Upstate Biotechnology (Lake Placid, New York, United States).

simple1

Id Subject Object Predicate Lexical cue
T19426 283-288 Protein denotes c-Myc
T19425 240-244 Protein denotes Sox6
T19424 0-4 Protein denotes Sox6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T19620 283-288 Protein denotes c-Myc
T19619 240-244 Protein denotes Sox6
T19618 0-4 Protein denotes Sox6

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T19508 283-288 Protein denotes c-Myc
T19507 240-244 Protein denotes Sox6
T19506 0-4 Protein denotes Sox6

DLUT931

Id Subject Object Predicate Lexical cue
T19518 283-288 Protein denotes c-Myc
T19517 240-244 Protein denotes Sox6
T19516 0-4 Protein denotes Sox6

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T19617 283-327 Binding denotes c-Myc antibody was purchased from Invitrogen
T19616 236-255 Entity denotes All Sox6 antibodies
T19615 343-355 Entity denotes IgG antibody
T19613 240-244 Protein denotes Sox6
T19612 283-297 Entity denotes c-Myc antibody
T19611 0-4 Protein denotes Sox6
T19610 0-34 Entity denotes Sox6 antibodies used in this study
T19609 283-288 Protein denotes c-Myc
R13933 T19612 T19617 themeOf c-Myc antibody,c-Myc antibody was purchased from Invitrogen

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T19604 434-435 . denotes .
T19603 433-434 -RRB- denotes )
T19602 427-433 NNPS denotes States
T19601 420-426 NNP denotes United
T19600 418-419 , denotes ,
T19599 414-418 NNP denotes York
T19598 410-413 NNP denotes New
T19597 408-409 , denotes ,
T19596 402-408 NNP denotes Placid
T19595 397-401 NNP denotes Lake
T19594 396-397 -LRB- denotes (
T19593 382-395 NNP denotes Biotechnology
T19592 374-381 NNP denotes Upstate
T19591 369-373 IN denotes from
T19590 360-368 VBN denotes obtained
T19589 356-359 VBD denotes was
T19588 347-355 NN denotes antibody
T19587 343-346 NNP denotes IgG
T19586 336-342 NN denotes rabbit
T19585 329-335 JJ denotes Normal
T19584 327-328 . denotes .
T19583 317-327 NNP denotes Invitrogen
T19582 312-316 IN denotes from
T19581 302-311 VBN denotes purchased
T19580 298-301 VBD denotes was
T19579 289-297 NN denotes antibody
T19578 283-288 JJ denotes c-Myc
T19577 281-282 . denotes .
T19576 274-281 NNS denotes results
T19575 266-273 JJ denotes similar
T19574 256-265 VBD denotes generated
T19573 245-255 NNS denotes antibodies
T19572 240-244 JJ denotes Sox6
T19571 236-239 DT denotes All
T19570 234-235 . denotes .
T19569 233-234 -RRB- denotes )
T19568 227-233 NNPS denotes States
T19567 220-226 NNP denotes United
T19566 218-219 , denotes ,
T19565 208-218 NNP denotes California
T19564 206-207 , denotes ,
T19563 202-206 NNP denotes Cruz
T19562 196-201 NNP denotes Santa
T19561 194-195 , denotes ,
T19560 181-194 NNP denotes Biotechnology
T19559 176-180 NNP denotes Cruz
T19558 170-175 NNP denotes Santa
T19557 168-169 , denotes ,
T19556 167-168 NNP denotes X
T19555 158-166 JJ denotes sc-17332
T19554 156-157 . denotes .
T19553 154-156 UH denotes No
T19552 146-153 NN denotes Catalog
T19551 145-146 -LRB- denotes (
T19550 136-144 VBN denotes obtained
T19549 123-135 RB denotes commercially
T19548 120-122 CC denotes or
T19547 118-119 -RRB- denotes )
T19546 117-118 NNP denotes ]
T19545 116-117 CD denotes 7
T19544 115-116 NNP denotes [
T19543 108-114 NNP denotes France
T19542 106-107 , denotes ,
T19541 99-106 NNP denotes Pasteur
T19540 93-98 NNP denotes Louis
T19539 82-92 NNP denotes Université
T19538 81-82 -LRB- denotes (
T19537 75-80 NNP denotes Lalli
T19536 70-74 NNP denotes Enzo
T19535 66-69 NNP denotes Dr.
T19534 63-65 IN denotes by
T19533 54-62 VBN denotes provided
T19532 47-53 RB denotes kindly
T19531 40-46 RB denotes either
T19530 35-39 VBD denotes were
T19529 29-34 NN denotes study
T19528 24-28 DT denotes this
T19527 21-23 IN denotes in
T19526 16-20 VBN denotes used
T19525 5-15 NNS denotes antibodies
T19524 0-4 JJ denotes Sox6
R13852 T19524 T19525 amod Sox6,antibodies
R13853 T19525 T19530 nsubj antibodies,were
R13854 T19526 T19525 acl used,antibodies
R13855 T19527 T19526 prep in,used
R13856 T19528 T19529 det this,study
R13857 T19529 T19527 pobj study,in
R13858 T19530 T19533 auxpass were,provided
R13859 T19531 T19533 preconj either,provided
R13860 T19532 T19533 advmod kindly,provided
R13861 T19533 T19533 ROOT provided,provided
R13862 T19534 T19533 agent by,provided
R13863 T19535 T19537 compound Dr.,Lalli
R13864 T19536 T19537 compound Enzo,Lalli
R13865 T19537 T19534 pobj Lalli,by
R13866 T19538 T19541 punct (,Pasteur
R13867 T19539 T19541 compound Université,Pasteur
R13868 T19540 T19541 compound Louis,Pasteur
R13869 T19541 T19537 appos Pasteur,Lalli
R13870 T19542 T19541 punct ",",Pasteur
R13871 T19543 T19550 nsubj France,obtained
R13872 T19544 T19546 nmod [,]
R13873 T19545 T19546 nummod 7,]
R13874 T19546 T19543 nmod ],France
R13875 T19547 T19546 punct ),]
R13876 T19548 T19543 cc or,France
R13877 T19549 T19550 advmod commercially,obtained
R13878 T19550 T19533 conj obtained,provided
R13879 T19551 T19556 punct (,X
R13880 T19552 T19553 compound Catalog,No
R13881 T19553 T19556 nmod No,X
R13882 T19554 T19556 punct .,X
R13883 T19555 T19556 compound sc-17332,X
R13884 T19556 T19550 dobj X,obtained
R13885 T19557 T19556 punct ",",X
R13886 T19558 T19559 compound Santa,Cruz
R13887 T19559 T19560 compound Cruz,Biotechnology
R13888 T19560 T19556 conj Biotechnology,X
R13889 T19561 T19560 punct ",",Biotechnology
R13890 T19562 T19563 compound Santa,Cruz
R13891 T19563 T19560 conj Cruz,Biotechnology
R13892 T19564 T19563 punct ",",Cruz
R13893 T19565 T19563 conj California,Cruz
R13894 T19566 T19565 punct ",",California
R13895 T19567 T19568 compound United,States
R13896 T19568 T19565 conj States,California
R13897 T19569 T19550 punct ),obtained
R13898 T19570 T19533 punct .,provided
R13899 T19571 T19573 det All,antibodies
R13900 T19572 T19573 amod Sox6,antibodies
R13901 T19573 T19574 nsubj antibodies,generated
R13902 T19574 T19574 ROOT generated,generated
R13903 T19575 T19576 amod similar,results
R13904 T19576 T19574 dobj results,generated
R13905 T19577 T19574 punct .,generated
R13906 T19578 T19579 amod c-Myc,antibody
R13907 T19579 T19581 nsubjpass antibody,purchased
R13908 T19580 T19581 auxpass was,purchased
R13909 T19581 T19581 ROOT purchased,purchased
R13911 T19583 T19582 pobj Invitrogen,from
R13912 T19584 T19581 punct .,purchased
R13913 T19585 T19588 amod Normal,antibody
R13914 T19586 T19588 compound rabbit,antibody
R13915 T19587 T19588 compound IgG,antibody
R13916 T19588 T19590 nsubjpass antibody,obtained
R13917 T19589 T19590 auxpass was,obtained
R13918 T19590 T19590 ROOT obtained,obtained
R13919 T19591 T19590 prep from,obtained
R13920 T19592 T19593 compound Upstate,Biotechnology
R13921 T19593 T19591 pobj Biotechnology,from
R13922 T19594 T19596 punct (,Placid
R13923 T19595 T19596 compound Lake,Placid
R13924 T19596 T19593 appos Placid,Biotechnology
R13925 T19597 T19596 punct ",",Placid
R13926 T19598 T19599 compound New,York
R13927 T19599 T19596 npadvmod York,Placid
R13928 T19600 T19599 punct ",",York
R13929 T19601 T19602 compound United,States
R13930 T19602 T19599 appos States,York
R13931 T19603 T19596 punct ),Placid
R13932 T19604 T19590 punct .,obtained
R13910 T19582 T19581 prep from,purchased

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T19515 336-355 Protein denotes rabbit IgG antibody
T19514 283-297 Protein denotes c-Myc antibody
T19513 240-244 Protein denotes Sox6
T19512 0-4 Protein denotes Sox6

testone

Id Subject Object Predicate Lexical cue
T19395 283-288 Protein denotes c-Myc
T19394 240-244 Protein denotes Sox6
T19393 0-4 Protein denotes Sox6

test3

Id Subject Object Predicate Lexical cue
T19401 283-288 Protein denotes c-Myc
T19400 240-244 Protein denotes Sox6
T19399 0-4 Protein denotes Sox6
T19398 283-288 Protein denotes c-Myc
T19397 240-244 Protein denotes Sox6
T19396 0-4 Protein denotes Sox6