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PMC:1359074 / 40769-41216 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
16462943-11818535-85761029 128-129 11818535 denotes 7
T70190 128-129 11818535 denotes 7

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T19503 445-446 -RRB- denotes )
T19502 439-445 NNP denotes States
T19501 432-438 NNP denotes United
T19500 430-431 -COMMA- denotes ,
T19499 426-430 NNP denotes York
T19498 422-425 NNP denotes New
T19497 420-421 -COMMA- denotes ,
T19496 414-420 NNP denotes Placid
T19495 409-413 NNP denotes Lake
T19494 408-409 -LRB- denotes (
T19493 394-407 NNP denotes Biotechnology
T19492 386-393 NNP denotes Upstate
T19491 381-385 IN denotes from
T19490 372-380 VB denotes obtained
T19463 193-206 NNP denotes Biotechnology
T19462 188-192 NNP denotes Cruz
T19461 182-187 NNP denotes Santa
T19460 180-181 -COMMA- denotes ,
T19459 179-180 NNP denotes X
T19458 170-178 NN denotes sc-17332
T19457 166-169 NN denotes No.
T19456 158-165 NNP denotes Catalog
T19455 157-158 -LRB- denotes (
T19454 148-156 VB denotes obtained
T19453 135-147 RB denotes commercially
T19452 132-134 CC denotes or
T19451 130-131 -RRB- denotes )
T19450 129-130 -RRB- denotes ]
T19449 128-129 CD denotes 7
T19448 127-128 -LRB- denotes [
T19447 120-126 NNP denotes France
T19446 118-119 -COMMA- denotes ,
T19445 111-118 NNP denotes Pasteur
T19444 105-110 NNP denotes Louis
T19443 94-104 NNP denotes Université
T19442 93-94 -LRB- denotes (
T19441 87-92 NNP denotes Lalli
T19440 82-86 NNP denotes Enzo
T19439 78-81 NNP denotes Dr.
T19438 75-77 IN denotes by
T19437 66-74 VB denotes provided
T19436 59-65 RB denotes kindly
T19435 52-58 CC denotes either
T19434 47-51 VB denotes were
T19433 41-46 NN denotes study
T19432 36-40 DT denotes this
T19431 33-35 IN denotes in
T19430 28-32 VB denotes used
T19429 17-27 NN denotes antibodies
T19428 12-16 NN denotes Sox6
T19427 0-10 NN denotes Antibodies
T19489 368-371 VB denotes was
T19488 359-367 NN denotes antibody
T19487 355-358 NN denotes IgG
T19486 348-354 NN denotes rabbit
T19485 341-347 NNP denotes Normal
T19484 329-340 NNP denotes Invitrogen.
T19483 324-328 IN denotes from
T19482 314-323 VB denotes purchased
T19481 310-313 VB denotes was
T19480 301-309 NN denotes antibody
T19479 295-300 NN denotes c-Myc
T19478 286-294 JJ denotes results.
T19477 278-285 JJ denotes similar
T19476 268-277 VB denotes generated
T19475 257-267 NN denotes antibodies
T19474 252-256 NN denotes Sox6
T19473 248-251 DT denotes All
T19472 245-246 -RRB- denotes )
T19471 239-245 NNP denotes States
T19470 232-238 NNP denotes United
T19469 230-231 -COMMA- denotes ,
T19468 220-230 NNP denotes California
T19467 218-219 -COMMA- denotes ,
T19466 214-218 NNP denotes Cruz
T19465 208-213 NNP denotes Santa
T19464 206-207 -COMMA- denotes ,
R13772 T19429 T19428 arg1Of antibodies,Sox6
R13773 T19429 T19430 arg2Of antibodies,used
R13774 T19429 T19434 arg1Of antibodies,were
R13775 T19429 T19437 arg2Of antibodies,provided
R13776 T19429 T19454 arg2Of antibodies,obtained
R13777 T19430 T19431 arg1Of used,in
R13778 T19433 T19431 arg2Of study,in
R13779 T19433 T19432 arg1Of study,this
R13780 T19437 T19436 arg1Of provided,kindly
R13781 T19437 T19452 arg1Of provided,or
R13782 T19441 T19437 arg1Of Lalli,provided
R13783 T19441 T19438 arg2Of Lalli,by
R13784 T19441 T19439 arg1Of Lalli,Dr.
R13785 T19441 T19440 arg1Of Lalli,Enzo
R13786 T19441 T19442 arg1Of Lalli,(
R13787 T19445 T19443 arg1Of Pasteur,Université
R13788 T19445 T19444 arg1Of Pasteur,Louis
R13789 T19445 T19446 arg1Of Pasteur,","
R13790 T19446 T19442 arg2Of ",",(
R13791 T19447 T19446 arg2Of France,","
R13792 T19447 T19448 arg1Of France,[
R13793 T19449 T19448 arg2Of 7,[
R13794 T19450 T19448 arg3Of ],[
R13795 T19451 T19442 arg3Of ),(
R13796 T19452 T19434 arg2Of or,were
R13797 T19452 T19435 arg1Of or,either
R13798 T19454 T19452 arg2Of obtained,or
R13799 T19454 T19453 arg1Of obtained,commercially
R13800 T19454 T19455 arg1Of obtained,(
R13801 T19459 T19455 arg2Of X,(
R13802 T19459 T19456 arg1Of X,Catalog
R13803 T19459 T19457 arg1Of X,No.
R13804 T19459 T19458 arg1Of X,sc-17332
R13805 T19459 T19460 arg1Of X,","
R13806 T19459 T19469 arg1Of X,","
R13807 T19463 T19460 arg2Of Biotechnology,","
R13808 T19463 T19461 arg1Of Biotechnology,Santa
R13809 T19463 T19462 arg1Of Biotechnology,Cruz
R13810 T19463 T19464 arg1Of Biotechnology,","
R13811 T19466 T19465 arg1Of Cruz,Santa
R13812 T19466 T19467 arg1Of Cruz,","
R13813 T19467 T19464 arg2Of ",",","
R13814 T19468 T19467 arg2Of California,","
R13815 T19471 T19469 arg2Of States,","
R13816 T19471 T19470 arg1Of States,United
R13817 T19472 T19455 arg3Of ),(
R13818 T19474 T19473 arg1Of Sox6,All
R13819 T19474 T19481 arg1Of Sox6,was
R13820 T19474 T19482 arg2Of Sox6,purchased
R13821 T19475 T19476 arg1Of antibodies,generated
R13822 T19480 T19476 arg2Of antibody,generated
R13823 T19480 T19477 arg1Of antibody,similar
R13824 T19480 T19478 arg1Of antibody,results.
R13825 T19480 T19479 arg1Of antibody,c-Myc
R13826 T19482 T19476 arg3Of purchased,generated
R13827 T19482 T19481 arg2Of purchased,was
R13828 T19482 T19483 arg1Of purchased,from
R13829 T19485 T19483 arg2Of Normal,from
R13830 T19485 T19484 arg1Of Normal,Invitrogen.
R13831 T19488 T19486 arg1Of antibody,rabbit
R13832 T19488 T19487 arg1Of antibody,IgG
R13833 T19488 T19489 arg1Of antibody,was
R13834 T19488 T19490 arg2Of antibody,obtained
R13835 T19490 T19481 modOf obtained,was
R13836 T19490 T19489 arg2Of obtained,was
R13837 T19490 T19491 arg1Of obtained,from
R13838 T19493 T19491 arg2Of Biotechnology,from
R13839 T19493 T19492 arg1Of Biotechnology,Upstate
R13840 T19493 T19494 arg1Of Biotechnology,(
R13841 T19496 T19494 arg2Of Placid,(
R13842 T19496 T19495 arg1Of Placid,Lake
R13843 T19496 T19497 arg1Of Placid,","
R13844 T19496 T19500 arg1Of Placid,","
R13845 T19499 T19497 arg2Of York,","
R13846 T19499 T19498 arg1Of York,New
R13847 T19502 T19500 arg2Of States,","
R13848 T19502 T19501 arg1Of States,United
R13849 T19503 T19494 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T19410 295-300 Protein denotes c-Myc
T19409 252-256 Protein denotes Sox6
T19408 12-16 Protein denotes Sox6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T19505 252-256 http://www.uniprot.org/uniprot/P35712 denotes Sox6
T19504 12-16 http://www.uniprot.org/uniprot/P35712 denotes Sox6

GO-MF

Id Subject Object Predicate Lexical cue
T19414 359-367 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T19413 301-309 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T19412 257-267 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies
T19411 17-27 http://purl.obolibrary.org/obo/GO_0003823 denotes antibodies

GO-CC

Id Subject Object Predicate Lexical cue
T19423 355-367 http://purl.obolibrary.org/obo/GO_0071736 denotes IgG antibody
T19422 359-367 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody
T19421 301-309 http://purl.obolibrary.org/obo/GO_0042571 denotes antibody
T19420 257-267 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T19419 17-27 http://purl.obolibrary.org/obo/GO_0042571 denotes antibodies
T19418 359-367 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T19417 301-309 http://purl.obolibrary.org/obo/GO_0019815 denotes antibody
T19416 257-267 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies
T19415 17-27 http://purl.obolibrary.org/obo/GO_0019815 denotes antibodies

sentences

Id Subject Object Predicate Lexical cue
T19404 248-447 Sentence denotes All Sox6 antibodies generated similar results. c-Myc antibody was purchased from Invitrogen. Normal rabbit IgG antibody was obtained from Upstate Biotechnology (Lake Placid, New York, United States).
T19403 12-247 Sentence denotes Sox6 antibodies used in this study were either kindly provided by Dr. Enzo Lalli (Université Louis Pasteur, France [7]) or commercially obtained (Catalog No. sc-17332 X, Santa Cruz Biotechnology, Santa Cruz, California, United States).
T19402 0-11 Sentence denotes Antibodies.
T312 0-11 Sentence denotes Antibodies.
T313 12-247 Sentence denotes Sox6 antibodies used in this study were either kindly provided by Dr. Enzo Lalli (Université Louis Pasteur, France [7]) or commercially obtained (Catalog No. sc-17332 X, Santa Cruz Biotechnology, Santa Cruz, California, United States).
T314 248-340 Sentence denotes All Sox6 antibodies generated similar results. c-Myc antibody was purchased from Invitrogen.
T315 341-447 Sentence denotes Normal rabbit IgG antibody was obtained from Upstate Biotechnology (Lake Placid, New York, United States).

simple1

Id Subject Object Predicate Lexical cue
T19426 295-300 Protein denotes c-Myc
T19425 252-256 Protein denotes Sox6
T19424 12-16 Protein denotes Sox6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T19620 295-300 Protein denotes c-Myc
T19619 252-256 Protein denotes Sox6
T19618 12-16 Protein denotes Sox6

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T19508 295-300 Protein denotes c-Myc
T19507 252-256 Protein denotes Sox6
T19506 12-16 Protein denotes Sox6

DLUT931

Id Subject Object Predicate Lexical cue
T19518 295-300 Protein denotes c-Myc
T19517 252-256 Protein denotes Sox6
T19516 12-16 Protein denotes Sox6

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T19617 295-339 Binding denotes c-Myc antibody was purchased from Invitrogen
T19616 248-267 Entity denotes All Sox6 antibodies
T19615 355-367 Entity denotes IgG antibody
T19614 0-10 Entity denotes Antibodies
T19613 252-256 Protein denotes Sox6
T19612 295-309 Entity denotes c-Myc antibody
T19611 12-16 Protein denotes Sox6
T19610 12-46 Entity denotes Sox6 antibodies used in this study
T19609 295-300 Protein denotes c-Myc
R13933 T19612 T19617 themeOf c-Myc antibody,c-Myc antibody was purchased from Invitrogen

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T19604 446-447 . denotes .
T19603 445-446 -RRB- denotes )
T19602 439-445 NNPS denotes States
T19601 432-438 NNP denotes United
T19600 430-431 , denotes ,
T19599 426-430 NNP denotes York
T19598 422-425 NNP denotes New
T19597 420-421 , denotes ,
T19596 414-420 NNP denotes Placid
T19595 409-413 NNP denotes Lake
T19594 408-409 -LRB- denotes (
T19593 394-407 NNP denotes Biotechnology
T19592 386-393 NNP denotes Upstate
T19591 381-385 IN denotes from
T19590 372-380 VBN denotes obtained
T19589 368-371 VBD denotes was
T19588 359-367 NN denotes antibody
T19587 355-358 NNP denotes IgG
T19586 348-354 NN denotes rabbit
T19585 341-347 JJ denotes Normal
T19584 339-340 . denotes .
T19583 329-339 NNP denotes Invitrogen
T19582 324-328 IN denotes from
T19581 314-323 VBN denotes purchased
T19580 310-313 VBD denotes was
T19579 301-309 NN denotes antibody
T19578 295-300 JJ denotes c-Myc
T19577 293-294 . denotes .
T19576 286-293 NNS denotes results
T19575 278-285 JJ denotes similar
T19574 268-277 VBD denotes generated
T19573 257-267 NNS denotes antibodies
T19572 252-256 JJ denotes Sox6
T19571 248-251 DT denotes All
T19570 246-247 . denotes .
T19569 245-246 -RRB- denotes )
T19568 239-245 NNPS denotes States
T19567 232-238 NNP denotes United
T19566 230-231 , denotes ,
T19565 220-230 NNP denotes California
T19564 218-219 , denotes ,
T19563 214-218 NNP denotes Cruz
T19562 208-213 NNP denotes Santa
T19561 206-207 , denotes ,
T19560 193-206 NNP denotes Biotechnology
T19559 188-192 NNP denotes Cruz
T19558 182-187 NNP denotes Santa
T19557 180-181 , denotes ,
T19556 179-180 NNP denotes X
T19555 170-178 JJ denotes sc-17332
T19554 168-169 . denotes .
T19553 166-168 UH denotes No
T19552 158-165 NN denotes Catalog
T19551 157-158 -LRB- denotes (
T19550 148-156 VBN denotes obtained
T19549 135-147 RB denotes commercially
T19548 132-134 CC denotes or
T19547 130-131 -RRB- denotes )
T19546 129-130 NNP denotes ]
T19545 128-129 CD denotes 7
T19544 127-128 NNP denotes [
T19543 120-126 NNP denotes France
T19542 118-119 , denotes ,
T19541 111-118 NNP denotes Pasteur
T19540 105-110 NNP denotes Louis
T19539 94-104 NNP denotes Université
T19538 93-94 -LRB- denotes (
T19537 87-92 NNP denotes Lalli
T19536 82-86 NNP denotes Enzo
T19535 78-81 NNP denotes Dr.
T19534 75-77 IN denotes by
T19533 66-74 VBN denotes provided
T19532 59-65 RB denotes kindly
T19531 52-58 RB denotes either
T19530 47-51 VBD denotes were
T19529 41-46 NN denotes study
T19528 36-40 DT denotes this
T19527 33-35 IN denotes in
T19526 28-32 VBN denotes used
T19525 17-27 NNS denotes antibodies
T19524 12-16 JJ denotes Sox6
T19523 10-11 . denotes .
T19522 0-10 NNS denotes Antibodies
R13850 T19522 T19522 ROOT Antibodies,Antibodies
R13851 T19523 T19522 punct .,Antibodies
R13852 T19524 T19525 amod Sox6,antibodies
R13853 T19525 T19530 nsubj antibodies,were
R13854 T19526 T19525 acl used,antibodies
R13855 T19527 T19526 prep in,used
R13856 T19528 T19529 det this,study
R13857 T19529 T19527 pobj study,in
R13858 T19530 T19533 auxpass were,provided
R13859 T19531 T19533 preconj either,provided
R13860 T19532 T19533 advmod kindly,provided
R13861 T19533 T19533 ROOT provided,provided
R13862 T19534 T19533 agent by,provided
R13863 T19535 T19537 compound Dr.,Lalli
R13864 T19536 T19537 compound Enzo,Lalli
R13865 T19537 T19534 pobj Lalli,by
R13866 T19538 T19541 punct (,Pasteur
R13867 T19539 T19541 compound Université,Pasteur
R13868 T19540 T19541 compound Louis,Pasteur
R13869 T19541 T19537 appos Pasteur,Lalli
R13870 T19542 T19541 punct ",",Pasteur
R13871 T19543 T19550 nsubj France,obtained
R13872 T19544 T19546 nmod [,]
R13873 T19545 T19546 nummod 7,]
R13874 T19546 T19543 nmod ],France
R13875 T19547 T19546 punct ),]
R13876 T19548 T19543 cc or,France
R13877 T19549 T19550 advmod commercially,obtained
R13878 T19550 T19533 conj obtained,provided
R13879 T19551 T19556 punct (,X
R13880 T19552 T19553 compound Catalog,No
R13881 T19553 T19556 nmod No,X
R13882 T19554 T19556 punct .,X
R13883 T19555 T19556 compound sc-17332,X
R13884 T19556 T19550 dobj X,obtained
R13885 T19557 T19556 punct ",",X
R13886 T19558 T19559 compound Santa,Cruz
R13887 T19559 T19560 compound Cruz,Biotechnology
R13888 T19560 T19556 conj Biotechnology,X
R13889 T19561 T19560 punct ",",Biotechnology
R13890 T19562 T19563 compound Santa,Cruz
R13891 T19563 T19560 conj Cruz,Biotechnology
R13892 T19564 T19563 punct ",",Cruz
R13893 T19565 T19563 conj California,Cruz
R13894 T19566 T19565 punct ",",California
R13895 T19567 T19568 compound United,States
R13896 T19568 T19565 conj States,California
R13897 T19569 T19550 punct ),obtained
R13898 T19570 T19533 punct .,provided
R13899 T19571 T19573 det All,antibodies
R13900 T19572 T19573 amod Sox6,antibodies
R13901 T19573 T19574 nsubj antibodies,generated
R13902 T19574 T19574 ROOT generated,generated
R13903 T19575 T19576 amod similar,results
R13904 T19576 T19574 dobj results,generated
R13905 T19577 T19574 punct .,generated
R13906 T19578 T19579 amod c-Myc,antibody
R13907 T19579 T19581 nsubjpass antibody,purchased
R13908 T19580 T19581 auxpass was,purchased
R13909 T19581 T19581 ROOT purchased,purchased
R13911 T19583 T19582 pobj Invitrogen,from
R13912 T19584 T19581 punct .,purchased
R13913 T19585 T19588 amod Normal,antibody
R13914 T19586 T19588 compound rabbit,antibody
R13915 T19587 T19588 compound IgG,antibody
R13916 T19588 T19590 nsubjpass antibody,obtained
R13917 T19589 T19590 auxpass was,obtained
R13918 T19590 T19590 ROOT obtained,obtained
R13919 T19591 T19590 prep from,obtained
R13920 T19592 T19593 compound Upstate,Biotechnology
R13921 T19593 T19591 pobj Biotechnology,from
R13922 T19594 T19596 punct (,Placid
R13923 T19595 T19596 compound Lake,Placid
R13924 T19596 T19593 appos Placid,Biotechnology
R13925 T19597 T19596 punct ",",Placid
R13926 T19598 T19599 compound New,York
R13927 T19599 T19596 npadvmod York,Placid
R13928 T19600 T19599 punct ",",York
R13929 T19601 T19602 compound United,States
R13930 T19602 T19599 appos States,York
R13931 T19603 T19596 punct ),Placid
R13932 T19604 T19590 punct .,obtained
R13910 T19582 T19581 prep from,purchased

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T19515 348-367 Protein denotes rabbit IgG antibody
T19514 295-309 Protein denotes c-Myc antibody
T19513 252-256 Protein denotes Sox6
T19512 12-16 Protein denotes Sox6

testone

Id Subject Object Predicate Lexical cue
T19395 295-300 Protein denotes c-Myc
T19394 252-256 Protein denotes Sox6
T19393 12-16 Protein denotes Sox6

test3

Id Subject Object Predicate Lexical cue
T19401 295-300 Protein denotes c-Myc
T19400 252-256 Protein denotes Sox6
T19399 12-16 Protein denotes Sox6
T19398 295-300 Protein denotes c-Myc
T19397 252-256 Protein denotes Sox6
T19396 12-16 Protein denotes Sox6