> top > docs > PMC:1359074 > spans > 40-409 > annotations

PMC:1359074 / 40-409 JSONTXT

Annnotations TAB JSON ListView MergeView

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T256 9-11 IN denotes in
T257 12-22 JJ denotes Definitive
T258 23-37 NN denotes Erythropoiesis
T308 356-363 JJ denotes central
T307 352-355 DT denotes the
T306 349-351 IN denotes of
T305 337-348 NN denotes development
T304 333-336 DT denotes the
T303 330-332 IN denotes in
T302 325-329 NN denotes role
T301 323-324 DT denotes a
T300 317-322 VB denotes plays
T299 312-316 NN denotes Sox6
T298 307-311 IN denotes that
T297 297-306 VB denotes suggested
T296 292-296 VB denotes have
T295 284-291 NN denotes studies
T294 275-283 NNP denotes Previous
T293 270-274 NNP denotes Sry.
T292 268-269 -COMMA- denotes ,
T291 264-268 NN denotes gene
T290 252-263 VB denotes determining
T289 245-251 NN denotes testis
T288 241-244 DT denotes the
T287 238-240 IN denotes in
T286 228-237 VB denotes described
T285 222-227 RB denotes first
T284 220-221 -COMMA- denotes ,
T283 214-220 NN denotes domain
T282 206-213 NN denotes binding
T281 202-205 NN denotes DNA
T280 200-201 -RRB- denotes )
T279 197-200 NN denotes HMG
T278 196-197 -LRB- denotes (
T277 190-195 NN denotes group
T276 181-189 NN denotes mobility
T275 176-180 JJ denotes high
T274 166-175 VB denotes conserved
T273 162-165 DT denotes the
T272 159-161 IN denotes by
T271 151-158 VB denotes defined
T270 148-150 VB denotes is
T269 143-147 WDT denotes that
T268 136-142 NN denotes family
T267 129-135 NN denotes factor
T266 115-128 NN denotes transcription
T265 111-114 NN denotes Sox
T264 107-110 DT denotes the
T263 104-106 IN denotes of
T262 97-103 NN denotes member
T261 95-96 DT denotes a
T260 92-94 VB denotes is
T259 87-91 NN denotes Sox6
R48 T258 T256 arg2Of Erythropoiesis,in
R49 T258 T257 arg1Of Erythropoiesis,Definitive
R50 T259 T260 arg1Of Sox6,is
R51 T262 T260 arg2Of member,is
R52 T262 T261 arg1Of member,a
R53 T262 T263 arg1Of member,of
R54 T262 T269 arg1Of member,that
R55 T262 T270 arg1Of member,is
R56 T262 T271 arg2Of member,defined
R57 T268 T263 arg2Of family,of
R58 T268 T264 arg1Of family,the
R59 T268 T265 arg1Of family,Sox
R60 T268 T266 arg1Of family,transcription
R61 T268 T267 arg1Of family,factor
R62 T271 T270 arg2Of defined,is
R63 T279 T278 arg2Of HMG,(
R64 T280 T278 arg3Of ),(
R65 T283 T271 arg1Of domain,defined
R66 T283 T272 arg2Of domain,by
R67 T283 T273 arg1Of domain,the
R68 T283 T274 arg2Of domain,conserved
R69 T283 T275 arg1Of domain,high
R70 T283 T276 arg1Of domain,mobility
R71 T283 T277 arg1Of domain,group
R72 T283 T278 arg1Of domain,(
R73 T283 T281 arg1Of domain,DNA
R74 T283 T282 arg1Of domain,binding
R75 T283 T284 arg1Of domain,","
R76 T283 T286 arg2Of domain,described
R77 T286 T285 arg1Of described,first
R78 T286 T287 arg1Of described,in
R79 T289 T287 arg2Of testis,in
R80 T289 T288 arg1Of testis,the
R81 T289 T290 arg1Of testis,determining
R82 T291 T290 arg2Of gene,determining
R83 T291 T296 modOf gene,have
R84 T294 T293 arg1Of Previous,Sry.
R85 T295 T294 arg1Of studies,Previous
R86 T295 T296 arg1Of studies,have
R87 T295 T297 arg1Of studies,suggested
R88 T297 T292 arg1Of suggested,","
R89 T297 T296 arg2Of suggested,have
R90 T299 T300 arg1Of Sox6,plays
R91 T300 T297 arg2Of plays,suggested
R92 T300 T298 arg1Of plays,that
R93 T300 T303 arg1Of plays,in
R94 T302 T300 arg2Of role,plays
R95 T302 T301 arg1Of role,a
R96 T305 T306 arg1Of development,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T148 87-91 Protein denotes Sox6
T149 270-273 Protein denotes Sry
T150 312-316 Protein denotes Sox6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T474 87-91 http://www.uniprot.org/uniprot/P35712 denotes Sox6
T475 312-316 http://www.uniprot.org/uniprot/P35712 denotes Sox6

UBERON-AE

Id Subject Object Predicate Lexical cue
T86 245-251 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testis
T87 356-363 http://purl.obolibrary.org/obo/UBERON_0012131 denotes central

GO-BP

Id Subject Object Predicate Lexical cue
T104 12-37 http://purl.obolibrary.org/obo/GO_0060318 denotes Definitive Erythropoiesis
T107 23-37 http://purl.obolibrary.org/obo/GO_0030218 denotes Erythropoiesis
T111 337-348 http://purl.obolibrary.org/obo/GO_0032502 denotes development
T110 115-128 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

GO-MF

Id Subject Object Predicate Lexical cue
T169 202-213 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding
T170 202-220 http://purl.obolibrary.org/obo/GO_0050692 denotes DNA binding domain
T171 206-213 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T2 38-76 Sentence denotes Sox6 Silence Epsilon Globin Expression
T3 78-86 Sentence denotes Abstract
T4 87-274 Sentence denotes Sox6 is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry.

simple1

Id Subject Object Predicate Lexical cue
T235 312-316 Protein denotes Sox6
T234 270-273 Protein denotes Sry
T233 87-91 Protein denotes Sox6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T878 87-91 Protein denotes Sox6
T879 270-273 Protein denotes Sry
T880 312-316 Protein denotes Sox6

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T486 87-91 Protein denotes Sox6
T487 270-273 Protein denotes Sry
T488 312-316 Protein denotes Sox6

DLUT931

Id Subject Object Predicate Lexical cue
T517 87-91 Protein denotes Sox6
T518 270-273 Protein denotes Sry
T519 312-316 Protein denotes Sox6

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T875 241-273 Localization denotes the testis determining gene, Sry
T838 111-114 Protein denotes Sox
T844 87-91 Protein denotes Sox6
T846 241-273 Protein denotes the testis determining gene, Sry
T851 107-142 Protein denotes the Sox transcription factor family
T856 312-316 Protein denotes Sox6
T864 241-273 Protein denotes the testis determining gene, Sry
T865 202-273 Entity denotes DNA binding domain, first described in the testis determining gene, Sry
R576 T846 T875 themeOf "the testis determining gene, Sry","the testis determining gene, Sry"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T579 9-11 IN denotes in
T580 12-22 NNP denotes Definitive
T581 23-37 NNP denotes Erythropoiesis
T632 356-363 JJ denotes central
T631 352-355 DT denotes the
T630 349-351 IN denotes of
T629 337-348 NN denotes development
T628 333-336 DT denotes the
T627 330-332 IN denotes in
T626 325-329 NN denotes role
T625 323-324 DT denotes a
T624 317-322 NNS denotes plays
T623 312-316 JJ denotes Sox6
T622 307-311 IN denotes that
T621 297-306 VBN denotes suggested
T620 292-296 VBP denotes have
T619 284-291 NNS denotes studies
T618 275-283 JJ denotes Previous
T617 273-274 . denotes .
T616 270-273 NNP denotes Sry
T615 268-269 , denotes ,
T614 264-268 NN denotes gene
T613 252-263 VBG denotes determining
T612 245-251 NN denotes testis
T611 241-244 DT denotes the
T610 238-240 IN denotes in
T609 228-237 VBN denotes described
T608 222-227 JJ denotes first
T607 220-221 , denotes ,
T606 214-220 NN denotes domain
T605 206-213 JJ denotes binding
T604 202-205 NNP denotes DNA
T603 200-201 -RRB- denotes )
T602 197-200 NNP denotes HMG
T601 196-197 -LRB- denotes (
T600 190-195 NN denotes group
T599 181-189 NN denotes mobility
T598 176-180 JJ denotes high
T597 166-175 JJ denotes conserved
T596 162-165 DT denotes the
T595 159-161 IN denotes by
T594 151-158 VBN denotes defined
T593 148-150 VBZ denotes is
T592 143-147 WDT denotes that
T591 136-142 NN denotes family
T590 129-135 NN denotes factor
T589 115-128 NN denotes transcription
T588 111-114 NNPS denotes Sox
T587 107-110 DT denotes the
T586 104-106 IN denotes of
T585 97-103 NN denotes member
T584 95-96 DT denotes a
T583 92-94 VBZ denotes is
T582 87-91 NNP denotes Sox6
R276 T580 T582 compound Definitive,Sox6
R277 T581 T582 compound Erythropoiesis,Sox6
R278 T582 T579 pobj Sox6,in
R279 T583 T583 ROOT is,is
R280 T584 T585 det a,member
R281 T585 T583 attr member,is
R282 T586 T585 prep of,member
R283 T587 T591 det the,family
R284 T588 T591 compound Sox,family
R285 T589 T590 compound transcription,factor
R286 T590 T591 compound factor,family
R287 T591 T586 pobj family,of
R288 T592 T594 nsubjpass that,defined
R289 T593 T594 auxpass is,defined
R290 T594 T585 relcl defined,member
R291 T595 T594 agent by,defined
R292 T596 T600 det the,group
R293 T597 T600 amod conserved,group
R294 T598 T600 amod high,group
R295 T599 T600 compound mobility,group
R296 T600 T595 pobj group,by
R297 T601 T602 punct (,HMG
R298 T602 T600 appos HMG,group
R299 T603 T602 punct ),HMG
R300 T604 T606 compound DNA,domain
R301 T605 T606 amod binding,domain
R302 T606 T600 conj domain,group
R303 T607 T606 punct ",",domain
R304 T608 T609 advmod first,described
R305 T609 T600 acl described,group
R306 T610 T609 prep in,described
R307 T611 T614 det the,gene
R308 T612 T614 amod testis,gene
R309 T613 T614 amod determining,gene
R310 T614 T610 pobj gene,in
R311 T615 T614 punct ",",gene
R312 T616 T614 appos Sry,gene
R313 T617 T583 punct .,is
R314 T618 T619 amod Previous,studies
R315 T619 T621 nsubj studies,suggested
R316 T620 T621 aux have,suggested
R317 T621 T621 ROOT suggested,suggested
R318 T622 T624 mark that,plays
R319 T623 T624 nsubj Sox6,plays
R320 T624 T621 ccomp plays,suggested
R321 T625 T626 det a,role
R322 T626 T624 dobj role,plays
R323 T627 T626 prep in,role
R324 T628 T629 det the,development
R325 T629 T627 pobj development,in
R326 T630 T629 prep of,development

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T208 312-316 Protein denotes Sox6
T207 151-158 Negative_regulation denotes defined
T206 151-158 Negative_regulation denotes defined
T205 214-220 Entity denotes domain
T204 270-273 Protein denotes Sry
T203 111-142 Protein denotes Sox transcription factor family
T202 87-91 Protein denotes Sox6
R28 T202 T206 themeOf Sox6,defined
R29 T203 T207 themeOf Sox transcription factor family,defined
R30 T204 T205 partOf Sry,domain
R31 T205 T206 Site domain,defined
R32 T205 T207 Site domain,defined

testone

Id Subject Object Predicate Lexical cue
T22 87-91 Protein denotes Sox6
T23 270-273 Protein denotes Sry
T24 312-316 Protein denotes Sox6

test3

Id Subject Object Predicate Lexical cue
T47 87-91 Protein denotes Sox6
T48 270-273 Protein denotes Sry
T49 312-316 Protein denotes Sox6
T67 87-91 Protein denotes Sox6
T68 270-273 Protein denotes Sry
T69 312-316 Protein denotes Sox6