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PMC:1359074 / 388-550 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T333 153-162 JJ denotes nucleated
T332 150-152 IN denotes of
T331 142-149 NN denotes numbers
T330 132-141 VB denotes increased
T329 128-131 CC denotes and
T328 126-127 -COMMA- denotes ,
T327 117-126 VB denotes expressed
T326 104-116 RB denotes persistently
T325 101-103 VB denotes is
T324 94-100 NN denotes globin
T323 91-93 JJ denotes ɛy
T322 89-90 -COMMA- denotes ,
T321 84-89 NN denotes p100H
T320 82-83 -COMMA- denotes ,
T319 77-82 NN denotes mouse
T318 62-76 JJ denotes Sox6-deficient
T317 58-61 DT denotes the
T316 55-57 IN denotes In
T315 47-53 NN denotes muscle
T314 43-46 CC denotes and
T313 41-42 -COMMA- denotes ,
T312 32-41 NN denotes cartilage
T311 30-31 -COMMA- denotes ,
T310 24-30 NN denotes system
T309 16-23 JJ denotes nervous
T308 8-15 JJ denotes central
T307 4-7 DT denotes the
T306 1-3 IN denotes of
R98 T310 T306 arg2Of system,of
R99 T310 T307 arg1Of system,the
R100 T310 T308 arg1Of system,central
R101 T310 T309 arg1Of system,nervous
R102 T311 T314 arg1Of ",",and
R103 T312 T311 arg2Of cartilage,","
R106 T314 T313 arg1Of and,","
R107 T315 T314 arg2Of muscle,and
R108 T319 T316 arg2Of mouse,In
R109 T319 T317 arg1Of mouse,the
R110 T319 T318 arg1Of mouse,Sox6-deficient
R111 T319 T320 arg1Of mouse,","
R112 T321 T320 arg2Of p100H,","
R113 T324 T323 arg1Of globin,ɛy
R114 T324 T325 arg1Of globin,is
R115 T324 T327 arg2Of globin,expressed
R116 T327 T325 arg2Of expressed,is
R117 T327 T326 arg1Of expressed,persistently
R118 T327 T329 arg1Of expressed,and
R119 T329 T316 arg1Of and,In
R120 T329 T322 arg1Of and,","
R121 T329 T328 arg1Of and,","
R122 T331 T330 arg2Of numbers,increased
R123 T331 T332 arg1Of numbers,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T151 62-66 Protein denotes Sox6
T152 91-100 Protein denotes ɛy globin

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T476 62-66 http://www.uniprot.org/uniprot/P35712 denotes Sox6

UBERON-AE

Id Subject Object Predicate Lexical cue
T87 8-15 http://purl.obolibrary.org/obo/UBERON_0012131 denotes central
T88 8-30 http://purl.obolibrary.org/obo/UBERON_0001017 denotes central nervous system
T89 16-30 http://purl.obolibrary.org/obo/UBERON_0001016 denotes nervous system

GO-BP

Id Subject Object Predicate Lexical cue
T101 94-100 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

GO-MF

Id Subject Object Predicate Lexical cue
T166 94-100 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

ICD10

Id Subject Object Predicate Lexical cue
T173 16-23 http://purl.bioontology.org/ontology/ICD10/R45.0 denotes nervous

simple1

Id Subject Object Predicate Lexical cue
T237 91-100 Protein denotes ɛy globin
T236 62-66 Protein denotes Sox6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T881 62-66 Protein denotes Sox6
T882 91-100 Protein denotes ɛy globin
T896 117-126 Gene_expression denotes expressed
T897 67-76 Negative_regulation denotes deficient
R586 T881 T897 themeOf Sox6,deficient
R587 T882 T896 themeOf ɛy globin,expressed

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T489 62-66 Protein denotes Sox6
T490 91-100 Protein denotes ɛy globin
T505 67-76 Negative_regulation denotes deficient
T506 117-126 Gene_expression denotes expressed
R447 T489 T505 themeOf Sox6,deficient
R448 T490 T506 themeOf ɛy globin,expressed

DLUT931

Id Subject Object Predicate Lexical cue
T520 62-66 Protein denotes Sox6
T521 91-100 Protein denotes ɛy globin
T536 67-76 Negative_regulation denotes deficient
T537 117-126 Gene_expression denotes expressed
R463 T520 T536 themeOf Sox6,deficient
R464 T521 T537 themeOf ɛy globin,expressed

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T871 91-126 Gene_expression denotes ɛy globin is persistently expressed
T850 84-89 Entity denotes p100H
T853 91-100 Protein denotes ɛy globin
R580 T853 T871 themeOf ɛy globin,ɛy globin is persistently expressed

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T658 153-162 JJ denotes nucleated
T657 150-152 IN denotes of
T656 142-149 NNS denotes numbers
T655 132-141 VBD denotes increased
T654 128-131 CC denotes and
T653 126-127 , denotes ,
T652 117-126 VBN denotes expressed
T651 104-116 RB denotes persistently
T650 101-103 VBZ denotes is
T649 94-100 NN denotes globin
T648 91-93 JJ denotes ɛy
T647 89-90 , denotes ,
T646 84-89 NNP denotes p100H
T645 82-83 , denotes ,
T644 77-82 NN denotes mouse
T643 62-76 JJ denotes Sox6-deficient
T642 58-61 DT denotes the
T641 55-57 IN denotes In
T640 53-54 . denotes .
T639 47-53 NN denotes muscle
T638 43-46 CC denotes and
T637 41-42 , denotes ,
T636 32-41 NN denotes cartilage
T635 30-31 , denotes ,
T634 24-30 NN denotes system
T633 16-23 JJ denotes nervous
T632 8-15 JJ denotes central
T631 4-7 DT denotes the
T630 1-3 IN denotes of
R327 T631 T634 det the,system
R328 T632 T634 amod central,system
R329 T633 T634 amod nervous,system
R330 T634 T630 pobj system,of
R331 T635 T634 punct ",",system
R332 T636 T634 conj cartilage,system
R333 T637 T636 punct ",",cartilage
R334 T638 T636 cc and,cartilage
R335 T639 T636 conj muscle,cartilage
R337 T641 T652 prep In,expressed
R338 T642 T644 det the,mouse
R339 T643 T644 amod Sox6-deficient,mouse
R340 T644 T641 pobj mouse,In
R341 T645 T652 punct ",",expressed
R342 T646 T652 nsubjpass p100H,expressed
R343 T647 T652 punct ",",expressed
R344 T648 T649 amod ɛy,globin
R345 T649 T652 nsubjpass globin,expressed
R346 T650 T652 auxpass is,expressed
R347 T651 T652 advmod persistently,expressed
R348 T652 T652 ROOT expressed,expressed
R349 T653 T652 punct ",",expressed
R350 T654 T652 cc and,expressed
R351 T655 T656 amod increased,numbers
R353 T657 T656 prep of,numbers

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T214 117-126 Gene_expression denotes expressed
T213 117-126 Gene_expression denotes expressed
T212 67-76 Negative_regulation denotes deficient
T211 91-100 Protein denotes ɛy globin
T210 84-89 Protein denotes p100H
T209 62-66 Protein denotes Sox6
R33 T209 T212 themeOf Sox6,deficient
R34 T210 T213 themeOf p100H,expressed
R35 T211 T214 themeOf ɛy globin,expressed

testone

Id Subject Object Predicate Lexical cue
T25 62-66 Protein denotes Sox6
T26 91-100 Protein denotes ɛy globin
T40 67-76 Negative_regulation denotes deficient
T41 117-126 Gene_expression denotes expressed
R2 T25 T40 themeOf Sox6,deficient
R3 T26 T41 themeOf ɛy globin,expressed

test3

Id Subject Object Predicate Lexical cue
T50 62-66 Protein denotes Sox6
T51 91-100 Protein denotes ɛy globin
T70 62-66 Protein denotes Sox6
T71 91-100 Protein denotes ɛy globin
T72 117-126 Gene_expression denotes expressed
R12 T71 T72 themeOf ɛy globin,expressed