PMC:1359074 / 36488-36723
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17320 | 226-234 | NN | denotes | facility |
T17319 | 221-225 | NN | denotes | core |
T17318 | 213-220 | NNP | denotes | Arizona |
T17317 | 210-212 | IN | denotes | of |
T17316 | 199-209 | NNP | denotes | University |
T17315 | 195-198 | DT | denotes | the |
T17314 | 192-194 | IN | denotes | at |
T17313 | 190-191 | -RRB- | denotes | ) |
T17312 | 184-190 | NNP | denotes | States |
T17311 | 177-183 | NNP | denotes | United |
T17310 | 175-176 | -COMMA- | denotes | , |
T17309 | 165-175 | NNP | denotes | California |
T17308 | 163-164 | -COMMA- | denotes | , |
T17307 | 159-163 | NNP | denotes | City |
T17306 | 152-158 | NNP | denotes | Foster |
T17305 | 150-151 | -COMMA- | denotes | , |
T17304 | 140-150 | NNP | denotes | Biosystems |
T17303 | 132-139 | NNP | denotes | Applied |
T17302 | 131-132 | -LRB- | denotes | ( |
T17301 | 123-130 | NN | denotes | ABI7000 |
T17300 | 120-122 | DT | denotes | an |
T17299 | 117-119 | IN | denotes | on |
T17298 | 113-116 | VB | denotes | run |
T17297 | 109-112 | VB | denotes | was |
T17296 | 95-108 | NN | denotes | amplification |
T17295 | 91-94 | NN | denotes | PCR |
T17294 | 89-90 | -COMMA- | denotes | , |
T17293 | 88-89 | -RRB- | denotes | ) |
T17292 | 82-88 | NNP | denotes | States |
T17291 | 75-81 | NNP | denotes | United |
T17290 | 73-74 | -COMMA- | denotes | , |
T17289 | 63-73 | NNP | denotes | California |
T17288 | 61-62 | -COMMA- | denotes | , |
T17287 | 53-61 | NNP | denotes | Hercules |
T17286 | 51-52 | -COMMA- | denotes | , |
T17285 | 44-51 | NNP | denotes | Bio-Rad |
T17284 | 43-44 | -LRB- | denotes | ( |
T17283 | 39-42 | NN | denotes | ROX |
T17282 | 34-38 | IN | denotes | with |
T17281 | 30-33 | NN | denotes | kit |
T17280 | 21-29 | NN | denotes | supermix |
T17279 | 15-20 | JJ | denotes | green |
T17278 | 10-14 | NN | denotes | SYBR |
T17277 | 6-9 | DT | denotes | the |
T17276 | 0-5 | VB | denotes | Using |
R12015 | T17276 | T17284 | arg1Of | Using,( |
R12016 | T17281 | T17276 | arg2Of | kit,Using |
R12017 | T17281 | T17277 | arg1Of | kit,the |
R12018 | T17281 | T17278 | arg1Of | kit,SYBR |
R12019 | T17281 | T17279 | arg1Of | kit,green |
R12020 | T17281 | T17280 | arg1Of | kit,supermix |
R12021 | T17281 | T17282 | arg1Of | kit,with |
R12022 | T17283 | T17282 | arg2Of | ROX,with |
R12023 | T17285 | T17286 | arg1Of | Bio-Rad,"," |
R12024 | T17286 | T17288 | arg1Of | ",","," |
R12025 | T17287 | T17286 | arg2Of | Hercules,"," |
R12026 | T17288 | T17290 | arg1Of | ",","," |
R12027 | T17289 | T17288 | arg2Of | California,"," |
R12028 | T17290 | T17284 | arg2Of | ",",( |
R12029 | T17292 | T17290 | arg2Of | States,"," |
R12030 | T17292 | T17291 | arg1Of | States,United |
R12031 | T17293 | T17284 | arg3Of | ),( |
R12032 | T17296 | T17295 | arg1Of | amplification,PCR |
R12033 | T17296 | T17297 | arg1Of | amplification,was |
R12034 | T17296 | T17298 | arg2Of | amplification,run |
R12035 | T17298 | T17276 | modOf | run,Using |
R12036 | T17298 | T17294 | arg1Of | run,"," |
R12037 | T17298 | T17297 | arg2Of | run,was |
R12038 | T17298 | T17299 | arg1Of | run,on |
R12039 | T17301 | T17299 | arg2Of | ABI7000,on |
R12040 | T17301 | T17300 | arg1Of | ABI7000,an |
R12041 | T17301 | T17302 | arg1Of | ABI7000,( |
R12042 | T17301 | T17314 | arg1Of | ABI7000,at |
R12043 | T17304 | T17303 | arg1Of | Biosystems,Applied |
R12044 | T17304 | T17305 | arg1Of | Biosystems,"," |
R12045 | T17305 | T17308 | arg1Of | ",","," |
R12046 | T17307 | T17305 | arg2Of | City,"," |
R12047 | T17307 | T17306 | arg1Of | City,Foster |
R12048 | T17308 | T17310 | arg1Of | ",","," |
R12049 | T17309 | T17308 | arg2Of | California,"," |
R12050 | T17310 | T17302 | arg2Of | ",",( |
R12051 | T17312 | T17310 | arg2Of | States,"," |
R12052 | T17312 | T17311 | arg1Of | States,United |
R12053 | T17313 | T17302 | arg3Of | ),( |
R12054 | T17316 | T17317 | arg1Of | University,of |
R12055 | T17318 | T17317 | arg2Of | Arizona,of |
R12056 | T17320 | T17314 | arg2Of | facility,at |
R12057 | T17320 | T17315 | arg1Of | facility,the |
R12058 | T17320 | T17316 | arg1Of | facility,University |
R12059 | T17320 | T17319 | arg1Of | facility,core |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17183 | 221-225 | http://purl.obolibrary.org/obo/GO_0019013 | denotes | core |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17151 | 0-235 | Sentence | denotes | Using the SYBR green supermix kit with ROX (Bio-Rad, Hercules, California, United States), PCR amplification was run on an ABI7000 (Applied Biosystems, Foster City, California, United States) at the University of Arizona core facility. |
T274 | 0-235 | Sentence | denotes | Using the SYBR green supermix kit with ROX (Bio-Rad, Hercules, California, United States), PCR amplification was run on an ABI7000 (Applied Biosystems, Foster City, California, United States) at the University of Arizona core facility. |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17696 | 195-234 | Entity | denotes | the University of Arizona core facility |
T17715 | 91-116 | Regulation | denotes | PCR amplification was run |
T17714 | 91-94 | Protein | denotes | PCR |
T17710 | 39-62 | Protein | denotes | ROX (Bio-Rad, Hercules, |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17602 | 234-235 | . | denotes | . |
T17601 | 226-234 | NN | denotes | facility |
T17600 | 221-225 | NN | denotes | core |
T17599 | 213-220 | NNP | denotes | Arizona |
T17598 | 210-212 | IN | denotes | of |
T17597 | 199-209 | NNP | denotes | University |
T17596 | 195-198 | DT | denotes | the |
T17595 | 192-194 | IN | denotes | at |
T17594 | 190-191 | -RRB- | denotes | ) |
T17593 | 184-190 | NNPS | denotes | States |
T17592 | 177-183 | NNP | denotes | United |
T17591 | 175-176 | , | denotes | , |
T17590 | 165-175 | NNP | denotes | California |
T17589 | 163-164 | , | denotes | , |
T17588 | 159-163 | NNP | denotes | City |
T17587 | 152-158 | NNP | denotes | Foster |
T17586 | 150-151 | , | denotes | , |
T17585 | 140-150 | NNPS | denotes | Biosystems |
T17584 | 132-139 | NNP | denotes | Applied |
T17583 | 131-132 | -LRB- | denotes | ( |
T17582 | 123-130 | NNP | denotes | ABI7000 |
T17581 | 120-122 | DT | denotes | an |
T17580 | 117-119 | IN | denotes | on |
T17579 | 113-116 | VBN | denotes | run |
T17578 | 109-112 | VBD | denotes | was |
T17577 | 95-108 | NN | denotes | amplification |
T17576 | 91-94 | NNP | denotes | PCR |
T17575 | 89-90 | , | denotes | , |
T17574 | 88-89 | -RRB- | denotes | ) |
T17573 | 82-88 | NNPS | denotes | States |
T17572 | 75-81 | NNP | denotes | United |
T17571 | 73-74 | , | denotes | , |
T17570 | 63-73 | NNP | denotes | California |
T17569 | 61-62 | , | denotes | , |
T17568 | 53-61 | NNP | denotes | Hercules |
T17567 | 51-52 | , | denotes | , |
T17566 | 44-51 | NNP | denotes | Bio-Rad |
T17565 | 43-44 | -LRB- | denotes | ( |
T17564 | 39-42 | NNP | denotes | ROX |
T17563 | 34-38 | IN | denotes | with |
T17562 | 30-33 | NN | denotes | kit |
T17561 | 21-29 | NN | denotes | supermix |
T17560 | 15-20 | JJ | denotes | green |
T17559 | 10-14 | NNP | denotes | SYBR |
T17558 | 6-9 | DT | denotes | the |
T17557 | 0-5 | VBG | denotes | Using |
R12256 | T17557 | T17579 | advcl | Using,run |
R12257 | T17558 | T17562 | det | the,kit |
R12258 | T17559 | T17562 | nmod | SYBR,kit |
R12259 | T17560 | T17562 | amod | green,kit |
R12260 | T17561 | T17562 | compound | supermix,kit |
R12261 | T17562 | T17557 | dobj | kit,Using |
R12262 | T17563 | T17557 | prep | with,Using |
R12263 | T17564 | T17563 | pobj | ROX,with |
R12264 | T17565 | T17566 | punct | (,Bio-Rad |
R12265 | T17566 | T17564 | appos | Bio-Rad,ROX |
R12266 | T17567 | T17566 | punct | ",",Bio-Rad |
R12267 | T17568 | T17566 | conj | Hercules,Bio-Rad |
R12268 | T17569 | T17568 | punct | ",",Hercules |
R12269 | T17570 | T17568 | conj | California,Hercules |
R12270 | T17571 | T17570 | punct | ",",California |
R12271 | T17572 | T17573 | compound | United,States |
R12272 | T17573 | T17570 | conj | States,California |
R12273 | T17574 | T17570 | punct | ),California |
R12274 | T17575 | T17579 | punct | ",",run |
R12275 | T17576 | T17577 | compound | PCR,amplification |
R12276 | T17577 | T17579 | nsubjpass | amplification,run |
R12277 | T17578 | T17579 | auxpass | was,run |
R12278 | T17579 | T17579 | ROOT | run,run |
R12279 | T17580 | T17579 | prep | on,run |
R12280 | T17581 | T17585 | det | an,Biosystems |
R12281 | T17582 | T17585 | nmod | ABI7000,Biosystems |
R12282 | T17583 | T17585 | punct | (,Biosystems |
R12283 | T17584 | T17585 | compound | Applied,Biosystems |
R12284 | T17585 | T17580 | pobj | Biosystems,on |
R12285 | T17586 | T17585 | punct | ",",Biosystems |
R12286 | T17587 | T17588 | compound | Foster,City |
R12287 | T17588 | T17585 | conj | City,Biosystems |
R12288 | T17589 | T17588 | punct | ",",City |
R12289 | T17590 | T17588 | appos | California,City |
R12290 | T17591 | T17590 | punct | ",",California |
R12291 | T17592 | T17593 | compound | United,States |
R12292 | T17593 | T17590 | appos | States,California |
R12293 | T17594 | T17588 | punct | ),City |
R12294 | T17595 | T17585 | prep | at,Biosystems |
R12295 | T17596 | T17597 | det | the,University |
R12296 | T17597 | T17601 | nmod | University,facility |
R12297 | T17598 | T17597 | prep | of,University |
R12298 | T17599 | T17598 | pobj | Arizona,of |
R12299 | T17600 | T17601 | amod | core,facility |
R12300 | T17601 | T17595 | pobj | facility,at |
R12301 | T17602 | T17579 | punct | .,run |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T17421 | 48-51 | Protein | denotes | Rad |
T17420 | 44-47 | Protein | denotes | Bio |
T17419 | 39-42 | Protein | denotes | ROX |