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PMC:1359074 / 36488-36723 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T17320 226-234 NN denotes facility
T17319 221-225 NN denotes core
T17318 213-220 NNP denotes Arizona
T17317 210-212 IN denotes of
T17316 199-209 NNP denotes University
T17315 195-198 DT denotes the
T17314 192-194 IN denotes at
T17313 190-191 -RRB- denotes )
T17312 184-190 NNP denotes States
T17311 177-183 NNP denotes United
T17310 175-176 -COMMA- denotes ,
T17309 165-175 NNP denotes California
T17308 163-164 -COMMA- denotes ,
T17307 159-163 NNP denotes City
T17306 152-158 NNP denotes Foster
T17305 150-151 -COMMA- denotes ,
T17304 140-150 NNP denotes Biosystems
T17303 132-139 NNP denotes Applied
T17302 131-132 -LRB- denotes (
T17301 123-130 NN denotes ABI7000
T17300 120-122 DT denotes an
T17299 117-119 IN denotes on
T17298 113-116 VB denotes run
T17297 109-112 VB denotes was
T17296 95-108 NN denotes amplification
T17295 91-94 NN denotes PCR
T17294 89-90 -COMMA- denotes ,
T17293 88-89 -RRB- denotes )
T17292 82-88 NNP denotes States
T17291 75-81 NNP denotes United
T17290 73-74 -COMMA- denotes ,
T17289 63-73 NNP denotes California
T17288 61-62 -COMMA- denotes ,
T17287 53-61 NNP denotes Hercules
T17286 51-52 -COMMA- denotes ,
T17285 44-51 NNP denotes Bio-Rad
T17284 43-44 -LRB- denotes (
T17283 39-42 NN denotes ROX
T17282 34-38 IN denotes with
T17281 30-33 NN denotes kit
T17280 21-29 NN denotes supermix
T17279 15-20 JJ denotes green
T17278 10-14 NN denotes SYBR
T17277 6-9 DT denotes the
T17276 0-5 VB denotes Using
R12015 T17276 T17284 arg1Of Using,(
R12016 T17281 T17276 arg2Of kit,Using
R12017 T17281 T17277 arg1Of kit,the
R12018 T17281 T17278 arg1Of kit,SYBR
R12019 T17281 T17279 arg1Of kit,green
R12020 T17281 T17280 arg1Of kit,supermix
R12021 T17281 T17282 arg1Of kit,with
R12022 T17283 T17282 arg2Of ROX,with
R12023 T17285 T17286 arg1Of Bio-Rad,","
R12024 T17286 T17288 arg1Of ",",","
R12025 T17287 T17286 arg2Of Hercules,","
R12026 T17288 T17290 arg1Of ",",","
R12027 T17289 T17288 arg2Of California,","
R12028 T17290 T17284 arg2Of ",",(
R12029 T17292 T17290 arg2Of States,","
R12030 T17292 T17291 arg1Of States,United
R12031 T17293 T17284 arg3Of ),(
R12032 T17296 T17295 arg1Of amplification,PCR
R12033 T17296 T17297 arg1Of amplification,was
R12034 T17296 T17298 arg2Of amplification,run
R12035 T17298 T17276 modOf run,Using
R12036 T17298 T17294 arg1Of run,","
R12037 T17298 T17297 arg2Of run,was
R12038 T17298 T17299 arg1Of run,on
R12039 T17301 T17299 arg2Of ABI7000,on
R12040 T17301 T17300 arg1Of ABI7000,an
R12041 T17301 T17302 arg1Of ABI7000,(
R12042 T17301 T17314 arg1Of ABI7000,at
R12043 T17304 T17303 arg1Of Biosystems,Applied
R12044 T17304 T17305 arg1Of Biosystems,","
R12045 T17305 T17308 arg1Of ",",","
R12046 T17307 T17305 arg2Of City,","
R12047 T17307 T17306 arg1Of City,Foster
R12048 T17308 T17310 arg1Of ",",","
R12049 T17309 T17308 arg2Of California,","
R12050 T17310 T17302 arg2Of ",",(
R12051 T17312 T17310 arg2Of States,","
R12052 T17312 T17311 arg1Of States,United
R12053 T17313 T17302 arg3Of ),(
R12054 T17316 T17317 arg1Of University,of
R12055 T17318 T17317 arg2Of Arizona,of
R12056 T17320 T17314 arg2Of facility,at
R12057 T17320 T17315 arg1Of facility,the
R12058 T17320 T17316 arg1Of facility,University
R12059 T17320 T17319 arg1Of facility,core

GO-CC

Id Subject Object Predicate Lexical cue
T17183 221-225 http://purl.obolibrary.org/obo/GO_0019013 denotes core

sentences

Id Subject Object Predicate Lexical cue
T17151 0-235 Sentence denotes Using the SYBR green supermix kit with ROX (Bio-Rad, Hercules, California, United States), PCR amplification was run on an ABI7000 (Applied Biosystems, Foster City, California, United States) at the University of Arizona core facility.
T274 0-235 Sentence denotes Using the SYBR green supermix kit with ROX (Bio-Rad, Hercules, California, United States), PCR amplification was run on an ABI7000 (Applied Biosystems, Foster City, California, United States) at the University of Arizona core facility.

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T17696 195-234 Entity denotes the University of Arizona core facility
T17715 91-116 Regulation denotes PCR amplification was run
T17714 91-94 Protein denotes PCR
T17710 39-62 Protein denotes ROX (Bio-Rad, Hercules,

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T17602 234-235 . denotes .
T17601 226-234 NN denotes facility
T17600 221-225 NN denotes core
T17599 213-220 NNP denotes Arizona
T17598 210-212 IN denotes of
T17597 199-209 NNP denotes University
T17596 195-198 DT denotes the
T17595 192-194 IN denotes at
T17594 190-191 -RRB- denotes )
T17593 184-190 NNPS denotes States
T17592 177-183 NNP denotes United
T17591 175-176 , denotes ,
T17590 165-175 NNP denotes California
T17589 163-164 , denotes ,
T17588 159-163 NNP denotes City
T17587 152-158 NNP denotes Foster
T17586 150-151 , denotes ,
T17585 140-150 NNPS denotes Biosystems
T17584 132-139 NNP denotes Applied
T17583 131-132 -LRB- denotes (
T17582 123-130 NNP denotes ABI7000
T17581 120-122 DT denotes an
T17580 117-119 IN denotes on
T17579 113-116 VBN denotes run
T17578 109-112 VBD denotes was
T17577 95-108 NN denotes amplification
T17576 91-94 NNP denotes PCR
T17575 89-90 , denotes ,
T17574 88-89 -RRB- denotes )
T17573 82-88 NNPS denotes States
T17572 75-81 NNP denotes United
T17571 73-74 , denotes ,
T17570 63-73 NNP denotes California
T17569 61-62 , denotes ,
T17568 53-61 NNP denotes Hercules
T17567 51-52 , denotes ,
T17566 44-51 NNP denotes Bio-Rad
T17565 43-44 -LRB- denotes (
T17564 39-42 NNP denotes ROX
T17563 34-38 IN denotes with
T17562 30-33 NN denotes kit
T17561 21-29 NN denotes supermix
T17560 15-20 JJ denotes green
T17559 10-14 NNP denotes SYBR
T17558 6-9 DT denotes the
T17557 0-5 VBG denotes Using
R12256 T17557 T17579 advcl Using,run
R12257 T17558 T17562 det the,kit
R12258 T17559 T17562 nmod SYBR,kit
R12259 T17560 T17562 amod green,kit
R12260 T17561 T17562 compound supermix,kit
R12261 T17562 T17557 dobj kit,Using
R12262 T17563 T17557 prep with,Using
R12263 T17564 T17563 pobj ROX,with
R12264 T17565 T17566 punct (,Bio-Rad
R12265 T17566 T17564 appos Bio-Rad,ROX
R12266 T17567 T17566 punct ",",Bio-Rad
R12267 T17568 T17566 conj Hercules,Bio-Rad
R12268 T17569 T17568 punct ",",Hercules
R12269 T17570 T17568 conj California,Hercules
R12270 T17571 T17570 punct ",",California
R12271 T17572 T17573 compound United,States
R12272 T17573 T17570 conj States,California
R12273 T17574 T17570 punct ),California
R12274 T17575 T17579 punct ",",run
R12275 T17576 T17577 compound PCR,amplification
R12276 T17577 T17579 nsubjpass amplification,run
R12277 T17578 T17579 auxpass was,run
R12278 T17579 T17579 ROOT run,run
R12279 T17580 T17579 prep on,run
R12280 T17581 T17585 det an,Biosystems
R12281 T17582 T17585 nmod ABI7000,Biosystems
R12282 T17583 T17585 punct (,Biosystems
R12283 T17584 T17585 compound Applied,Biosystems
R12284 T17585 T17580 pobj Biosystems,on
R12285 T17586 T17585 punct ",",Biosystems
R12286 T17587 T17588 compound Foster,City
R12287 T17588 T17585 conj City,Biosystems
R12288 T17589 T17588 punct ",",City
R12289 T17590 T17588 appos California,City
R12290 T17591 T17590 punct ",",California
R12291 T17592 T17593 compound United,States
R12292 T17593 T17590 appos States,California
R12293 T17594 T17588 punct ),City
R12294 T17595 T17585 prep at,Biosystems
R12295 T17596 T17597 det the,University
R12296 T17597 T17601 nmod University,facility
R12297 T17598 T17597 prep of,University
R12298 T17599 T17598 pobj Arizona,of
R12299 T17600 T17601 amod core,facility
R12300 T17601 T17595 pobj facility,at
R12301 T17602 T17579 punct .,run

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T17421 48-51 Protein denotes Rad
T17420 44-47 Protein denotes Bio
T17419 39-42 Protein denotes ROX