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PMC:1359074 / 35335-35482 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
16462943-12677004-85761025 143-145 12677004 denotes 32
T39276 143-145 12677004 denotes 32

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T16374 78-82 WDT denotes that
T16373 76-77 -RRB- denotes )
T16372 58-76 NN denotes Sox6-ΔHMG-pcDNA3.1
T16371 57-58 -LRB- denotes (
T16370 47-56 NN denotes construct
T16369 32-46 NN denotes overexpression
T16368 27-31 NN denotes Sox6
T16367 23-26 DT denotes the
T16366 20-22 IN denotes of
T16365 12-19 NN denotes version
T16364 2-11 VB denotes truncated
T16363 0-1 DT denotes A
T16388 145-146 -RRB- denotes ]
T16387 143-145 CD denotes 32
T16386 142-143 -LRB- denotes [
T16385 135-141 NN denotes others
T16384 132-134 IN denotes by
T16383 122-131 VB denotes described
T16382 119-121 IN denotes as
T16381 117-118 -COMMA- denotes ,
T16380 108-117 VB denotes generated
T16379 104-107 VB denotes was
T16378 97-103 NN denotes domain
T16377 93-96 NN denotes HMG
T16376 89-92 DT denotes the
T16375 83-88 VB denotes lacks
R11375 T16365 T16363 arg1Of version,A
R11376 T16365 T16364 arg2Of version,truncated
R11377 T16365 T16366 arg1Of version,of
R11378 T16365 T16379 arg1Of version,was
R11379 T16365 T16380 arg2Of version,generated
R11380 T16370 T16366 arg2Of construct,of
R11381 T16370 T16367 arg1Of construct,the
R11382 T16370 T16368 arg1Of construct,Sox6
R11383 T16370 T16369 arg1Of construct,overexpression
R11384 T16370 T16371 arg1Of construct,(
R11385 T16370 T16374 arg1Of construct,that
R11386 T16370 T16375 arg1Of construct,lacks
R11387 T16372 T16371 arg2Of Sox6-ΔHMG-pcDNA3.1,(
R11388 T16373 T16371 arg3Of ),(
R11389 T16378 T16375 arg2Of domain,lacks
R11390 T16378 T16376 arg1Of domain,the
R11391 T16378 T16377 arg1Of domain,HMG
R11392 T16380 T16379 arg2Of generated,was
R11393 T16380 T16381 arg1Of generated,","
R11394 T16380 T16382 arg1Of generated,as
R11395 T16383 T16382 arg2Of described,as
R11396 T16385 T16383 arg1Of others,described
R11397 T16385 T16384 arg2Of others,by
R11398 T16385 T16386 arg1Of others,[
R11399 T16387 T16386 arg2Of 32,[
R11400 T16388 T16386 arg3Of ],[

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T16052 58-62 Protein denotes Sox6
T16051 27-31 Protein denotes Sox6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T16449 58-62 http://www.uniprot.org/uniprot/P35712 denotes Sox6
T16448 27-31 http://www.uniprot.org/uniprot/P35712 denotes Sox6

sentences

Id Subject Object Predicate Lexical cue
T16006 0-147 Sentence denotes A truncated version of the Sox6 overexpression construct (Sox6-ΔHMG-pcDNA3.1) that lacks the HMG domain was generated, as described by others [32].
T262 0-147 Sentence denotes A truncated version of the Sox6 overexpression construct (Sox6-ΔHMG-pcDNA3.1) that lacks the HMG domain was generated, as described by others [32].

simple1

Id Subject Object Predicate Lexical cue
T16071 58-62 Protein denotes Sox6
T16070 27-31 Protein denotes Sox6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T17090 58-62 Protein denotes Sox6
T17089 27-31 Protein denotes Sox6

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T16472 32-46 Positive_regulation denotes overexpression
T16465 58-62 Protein denotes Sox6
T16464 27-31 Protein denotes Sox6
R11459 T16464 T16472 themeOf Sox6,overexpression

DLUT931

Id Subject Object Predicate Lexical cue
T16542 32-46 Positive_regulation denotes overexpression
T16535 58-62 Protein denotes Sox6
T16534 27-31 Protein denotes Sox6
R11473 T16534 T16542 themeOf Sox6,overexpression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T17049 89-103 Entity denotes the HMG domain
T17042 27-31 Protein denotes Sox6
T17073 20-77 Positive_regulation denotes of the Sox6 overexpression construct (Sox6-ΔHMG-pcDNA3.1)
T17072 20-77 Gene_expression denotes of the Sox6 overexpression construct (Sox6-ΔHMG-pcDNA3.1)
R11926 T17042 T17072 themeOf Sox6,of the Sox6 overexpression construct (Sox6-ΔHMG-pcDNA3.1)
R11927 T17042 T17073 themeOf Sox6,of the Sox6 overexpression construct (Sox6-ΔHMG-pcDNA3.1)

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T16924 146-147 . denotes .
T16923 145-146 NNP denotes ]
T16922 143-145 CD denotes 32
T16921 142-143 NNP denotes [
T16920 135-141 NNS denotes others
T16919 132-134 IN denotes by
T16918 122-131 VBN denotes described
T16917 119-121 IN denotes as
T16916 117-118 , denotes ,
T16915 108-117 VBN denotes generated
T16914 104-107 VBD denotes was
T16913 97-103 NN denotes domain
T16912 93-96 NNP denotes HMG
T16911 89-92 DT denotes the
T16910 83-88 VBZ denotes lacks
T16909 78-82 WDT denotes that
T16908 76-77 -RRB- denotes )
T16907 74-76 CD denotes .1
T16906 58-74 JJ denotes Sox6-ΔHMG-pcDNA3
T16905 57-58 -LRB- denotes (
T16904 47-56 VBP denotes construct
T16903 32-46 NN denotes overexpression
T16902 27-31 JJ denotes Sox6
T16901 23-26 DT denotes the
T16900 20-22 IN denotes of
T16899 12-19 NN denotes version
T16898 2-11 VBN denotes truncated
T16897 0-1 DT denotes A
R11813 T16897 T16899 det A,version
R11814 T16898 T16899 amod truncated,version
R11815 T16899 T16904 nsubj version,construct
R11816 T16900 T16899 prep of,version
R11817 T16901 T16903 det the,overexpression
R11818 T16902 T16903 amod Sox6,overexpression
R11819 T16903 T16900 pobj overexpression,of
R11820 T16904 T16904 ROOT construct,construct
R11821 T16905 T16908 punct (,)
R11822 T16906 T16908 nmod Sox6-ΔHMG-pcDNA3,)
R11823 T16907 T16906 nummod .1,Sox6-ΔHMG-pcDNA3
R11824 T16908 T16904 punct ),construct
R11825 T16909 T16910 nsubj that,lacks
R11826 T16910 T16904 ccomp lacks,construct
R11827 T16911 T16913 det the,domain
R11828 T16912 T16913 compound HMG,domain
R11829 T16913 T16915 nsubjpass domain,generated
R11830 T16914 T16915 auxpass was,generated
R11831 T16915 T16910 ccomp generated,lacks
R11832 T16916 T16915 punct ",",generated
R11833 T16917 T16918 mark as,described
R11834 T16918 T16915 advcl described,generated
R11835 T16919 T16918 agent by,described
R11836 T16920 T16919 pobj others,by
R11837 T16921 T16923 nmod [,]
R11838 T16922 T16923 nummod 32,]
R11839 T16923 T16920 appos ],others
R11840 T16924 T16904 punct .,construct

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T16517 83-88 Negative_regulation denotes lacks
T16516 93-103 Protein denotes HMG domain
T16515 58-62 Protein denotes Sox6
T16514 27-31 Protein denotes Sox6
R11468 T16516 T16517 themeOf HMG domain,lacks

testone

Id Subject Object Predicate Lexical cue
T15956 58-62 Protein denotes Sox6
T15955 27-31 Protein denotes Sox6

test3

Id Subject Object Predicate Lexical cue
T15993 58-62 Protein denotes Sox6
T15992 27-31 Protein denotes Sox6
T15975 58-62 Protein denotes Sox6
T15974 27-31 Protein denotes Sox6