PMC:1359074 / 35286-35334 JSONTXT

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    2_test

    {"project":"2_test","denotations":[{"id":"16462943-14530442-85761024","span":{"begin":15,"end":17},"obj":"14530442"},{"id":"T89386","span":{"begin":15,"end":17},"obj":"14530442"}],"text":"Sox6-pcDNA3.1 [15] was used to overexpress Sox6."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T16362","span":{"begin":43,"end":47},"obj":"NN"},{"id":"T16361","span":{"begin":31,"end":42},"obj":"VB"},{"id":"T16360","span":{"begin":28,"end":30},"obj":"TO"},{"id":"T16359","span":{"begin":23,"end":27},"obj":"VB"},{"id":"T16358","span":{"begin":19,"end":22},"obj":"VB"},{"id":"T16357","span":{"begin":17,"end":18},"obj":"-RRB-"},{"id":"T16356","span":{"begin":15,"end":17},"obj":"CD"},{"id":"T16355","span":{"begin":14,"end":15},"obj":"-LRB-"},{"id":"T16354","span":{"begin":0,"end":13},"obj":"NN"}],"relations":[{"id":"R11365","pred":"arg1Of","subj":"T16354","obj":"T16355"},{"id":"R11366","pred":"arg1Of","subj":"T16354","obj":"T16358"},{"id":"R11367","pred":"arg2Of","subj":"T16354","obj":"T16359"},{"id":"R11368","pred":"arg1Of","subj":"T16354","obj":"T16361"},{"id":"R11369","pred":"arg2Of","subj":"T16356","obj":"T16355"},{"id":"R11370","pred":"arg3Of","subj":"T16357","obj":"T16355"},{"id":"R11371","pred":"arg2Of","subj":"T16359","obj":"T16358"},{"id":"R11372","pred":"arg3Of","subj":"T16361","obj":"T16359"},{"id":"R11373","pred":"arg1Of","subj":"T16361","obj":"T16360"},{"id":"R11374","pred":"arg2Of","subj":"T16362","obj":"T16361"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Sox6-pcDNA3.1 [15] was used to overexpress Sox6."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T16050","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T16049","span":{"begin":0,"end":4},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Sox6-pcDNA3.1 [15] was used to overexpress Sox6."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T16447","span":{"begin":43,"end":47},"obj":"http://www.uniprot.org/uniprot/P35712"},{"id":"T16446","span":{"begin":0,"end":4},"obj":"http://www.uniprot.org/uniprot/P35712"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Sox6-pcDNA3.1 [15] was used to overexpress Sox6."}

    sentences

    {"project":"sentences","denotations":[{"id":"T16005","span":{"begin":0,"end":48},"obj":"Sentence"},{"id":"T261","span":{"begin":0,"end":48},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Sox6-pcDNA3.1 [15] was used to overexpress Sox6."}

    simple1

    {"project":"simple1","denotations":[{"id":"T16069","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T16068","span":{"begin":0,"end":4},"obj":"Protein"}],"text":"Sox6-pcDNA3.1 [15] was used to overexpress Sox6."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T17096","span":{"begin":31,"end":42},"obj":"Gene_expression"},{"id":"T17095","span":{"begin":31,"end":42},"obj":"Positive_regulation"},{"id":"T17088","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T17087","span":{"begin":0,"end":4},"obj":"Protein"}],"relations":[{"id":"R11934","pred":"themeOf","subj":"T17088","obj":"T17096"},{"id":"R11936","pred":"themeOf","subj":"T17096","obj":"T17095"}],"text":"Sox6-pcDNA3.1 [15] was used to overexpress Sox6."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T16471","span":{"begin":31,"end":42},"obj":"Gene_expression"},{"id":"T16463","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T16462","span":{"begin":0,"end":4},"obj":"Protein"}],"relations":[{"id":"R11458","pred":"themeOf","subj":"T16463","obj":"T16471"}],"text":"Sox6-pcDNA3.1 [15] was used to overexpress Sox6."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T16541","span":{"begin":31,"end":42},"obj":"Gene_expression"},{"id":"T16533","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T16532","span":{"begin":0,"end":4},"obj":"Protein"}],"relations":[{"id":"R11472","pred":"themeOf","subj":"T16533","obj":"T16541"}],"text":"Sox6-pcDNA3.1 [15] was used to overexpress Sox6."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T17037","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T17075","span":{"begin":31,"end":47},"obj":"Gene_expression"},{"id":"T17074","span":{"begin":31,"end":47},"obj":"Positive_regulation"}],"relations":[{"id":"R11922","pred":"themeOf","subj":"T17037","obj":"T17074"},{"id":"R11923","pred":"themeOf","subj":"T17037","obj":"T17075"}],"text":"Sox6-pcDNA3.1 [15] was used to overexpress Sox6."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T16896","span":{"begin":47,"end":48},"obj":"."},{"id":"T16895","span":{"begin":43,"end":47},"obj":"NNP"},{"id":"T16894","span":{"begin":31,"end":42},"obj":"VB"},{"id":"T16893","span":{"begin":28,"end":30},"obj":"TO"},{"id":"T16892","span":{"begin":23,"end":27},"obj":"VBN"},{"id":"T16891","span":{"begin":19,"end":22},"obj":"VBD"},{"id":"T16890","span":{"begin":17,"end":18},"obj":"NNP"},{"id":"T16889","span":{"begin":15,"end":17},"obj":"CD"},{"id":"T16888","span":{"begin":14,"end":15},"obj":"NNP"},{"id":"T16887","span":{"begin":11,"end":13},"obj":"CD"},{"id":"T16886","span":{"begin":0,"end":11},"obj":"JJ"}],"relations":[{"id":"R11802","pred":"amod","subj":"T16886","obj":"T16890"},{"id":"R11803","pred":"nummod","subj":"T16887","obj":"T16890"},{"id":"R11804","pred":"nmod","subj":"T16888","obj":"T16890"},{"id":"R11805","pred":"nummod","subj":"T16889","obj":"T16890"},{"id":"R11806","pred":"nsubjpass","subj":"T16890","obj":"T16892"},{"id":"R11807","pred":"auxpass","subj":"T16891","obj":"T16892"},{"id":"R11808","pred":"ROOT","subj":"T16892","obj":"T16892"},{"id":"R11809","pred":"aux","subj":"T16893","obj":"T16894"},{"id":"R11810","pred":"xcomp","subj":"T16894","obj":"T16892"},{"id":"R11811","pred":"dobj","subj":"T16895","obj":"T16894"},{"id":"R11812","pred":"punct","subj":"T16896","obj":"T16892"}],"text":"Sox6-pcDNA3.1 [15] was used to overexpress Sox6."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T16513","span":{"begin":31,"end":42},"obj":"Positive_regulation"},{"id":"T16512","span":{"begin":31,"end":42},"obj":"Positive_regulation"},{"id":"T16511","span":{"begin":31,"end":42},"obj":"Gene_expression"},{"id":"T16510","span":{"begin":31,"end":42},"obj":"Gene_expression"},{"id":"T16509","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T16508","span":{"begin":0,"end":4},"obj":"Protein"}],"relations":[{"id":"R11464","pred":"themeOf","subj":"T16508","obj":"T16510"},{"id":"R11465","pred":"themeOf","subj":"T16509","obj":"T16511"},{"id":"R11466","pred":"themeOf","subj":"T16510","obj":"T16512"},{"id":"R11467","pred":"themeOf","subj":"T16511","obj":"T16513"}],"text":"Sox6-pcDNA3.1 [15] was used to overexpress Sox6."}

    testone

    {"project":"testone","denotations":[{"id":"T15954","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T15953","span":{"begin":0,"end":4},"obj":"Protein"}],"text":"Sox6-pcDNA3.1 [15] was used to overexpress Sox6."}

    test3

    {"project":"test3","denotations":[{"id":"T15991","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T15990","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T15973","span":{"begin":43,"end":47},"obj":"Protein"},{"id":"T15972","span":{"begin":0,"end":4},"obj":"Protein"}],"text":"Sox6-pcDNA3.1 [15] was used to overexpress Sox6."}