PMC:1359074 / 3288-3534
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1782 | 11-14 | NN | denotes | Sox |
T1781 | 9-10 | -COMMA- | denotes | , |
T1780 | 0-9 | RB | denotes | Therefore |
T1811 | 236-245 | NN | denotes | complexes |
T1810 | 223-235 | NN | denotes | multiprotein |
T1809 | 215-222 | VB | denotes | defined |
T1808 | 204-214 | RB | denotes | sterically |
T1807 | 202-203 | -COMMA- | denotes | , |
T1806 | 196-202 | JJ | denotes | active |
T1805 | 183-195 | RB | denotes | biologically |
T1804 | 178-182 | IN | denotes | into |
T1803 | 170-177 | NN | denotes | factors |
T1802 | 156-169 | NN | denotes | transcription |
T1801 | 146-155 | JJ | denotes | DNA-bound |
T1800 | 140-145 | JJ | denotes | other |
T1799 | 129-139 | VB | denotes | assembling |
T1798 | 125-128 | CC | denotes | and |
T1797 | 115-124 | NN | denotes | structure |
T1796 | 105-114 | NN | denotes | chromatin |
T1795 | 99-104 | JJ | denotes | local |
T1794 | 88-98 | VB | denotes | organizing |
T1793 | 85-87 | IN | denotes | by |
T1792 | 76-84 | NN | denotes | proteins |
T1791 | 62-75 | JJ | denotes | architectural |
T1790 | 59-61 | IN | denotes | as |
T1789 | 50-58 | NN | denotes | function |
T1788 | 44-49 | PRP-DOLLAR- | denotes | their |
T1787 | 41-43 | IN | denotes | of |
T1786 | 36-40 | NN | denotes | part |
T1784 | 24-27 | MD | denotes | may |
T1783 | 15-23 | NN | denotes | proteins |
T1785 | 28-35 | VB | denotes | perform |
R886 | T1783 | T1782 | arg1Of | proteins,Sox |
R887 | T1783 | T1784 | arg1Of | proteins,may |
R888 | T1783 | T1785 | arg1Of | proteins,perform |
R889 | T1783 | T1794 | arg1Of | proteins,organizing |
R890 | T1785 | T1780 | arg1Of | perform,Therefore |
R891 | T1785 | T1781 | arg1Of | perform,"," |
R892 | T1785 | T1784 | arg2Of | perform,may |
R893 | T1785 | T1790 | arg1Of | perform,as |
R894 | T1785 | T1793 | arg1Of | perform,by |
R895 | T1786 | T1785 | arg2Of | part,perform |
R896 | T1786 | T1787 | arg1Of | part,of |
R897 | T1789 | T1787 | arg2Of | function,of |
R898 | T1789 | T1788 | arg1Of | function,their |
R899 | T1792 | T1790 | arg2Of | proteins,as |
R900 | T1792 | T1791 | arg1Of | proteins,architectural |
R901 | T1794 | T1793 | arg2Of | organizing,by |
R902 | T1797 | T1795 | arg1Of | structure,local |
R903 | T1797 | T1796 | arg1Of | structure,chromatin |
R904 | T1797 | T1798 | arg1Of | structure,and |
R905 | T1798 | T1794 | arg2Of | and,organizing |
R906 | T1798 | T1804 | arg1Of | and,into |
R907 | T1803 | T1798 | arg2Of | factors,and |
R908 | T1803 | T1799 | arg1Of | factors,assembling |
R909 | T1803 | T1800 | arg1Of | factors,other |
R910 | T1803 | T1801 | arg1Of | factors,DNA-bound |
R911 | T1803 | T1802 | arg1Of | factors,transcription |
R912 | T1806 | T1805 | arg1Of | active,biologically |
R913 | T1806 | T1807 | arg1Of | active,"," |
R914 | T1809 | T1807 | arg2Of | defined,"," |
R915 | T1809 | T1808 | arg1Of | defined,sterically |
R916 | T1811 | T1804 | arg2Of | complexes,into |
R917 | T1811 | T1806 | arg1Of | complexes,active |
R918 | T1811 | T1809 | arg1Of | complexes,defined |
R919 | T1811 | T1810 | arg1Of | complexes,multiprotein |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1238 | 156-169 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1489 | 105-114 | http://purl.obolibrary.org/obo/GO_0000785 | denotes | chromatin |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1202 | 0-246 | Sentence | denotes | Therefore, Sox proteins may perform part of their function as architectural proteins by organizing local chromatin structure and assembling other DNA-bound transcription factors into biologically active, sterically defined multiprotein complexes. |
T22 | 0-246 | Sentence | denotes | Therefore, Sox proteins may perform part of their function as architectural proteins by organizing local chromatin structure and assembling other DNA-bound transcription factors into biologically active, sterically defined multiprotein complexes. |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4114 | 62-84 | Protein | denotes | architectural proteins |
T4086 | 223-235 | Protein | denotes | multiprotein |
T4080 | 146-155 | Entity | denotes | DNA-bound |
T4079 | 11-23 | Protein | denotes | Sox proteins |
T4061 | 236-245 | Entity | denotes | complexes |
T4038 | 11-14 | Protein | denotes | Sox |
T4213 | 140-177 | Binding | denotes | other DNA-bound transcription factors |
T4202 | 88-177 | Binding | denotes | organizing local chromatin structure and assembling other DNA-bound transcription factors |
T4175 | 140-177 | Protein | denotes | other DNA-bound transcription factors |
T4173 | 105-114 | Entity | denotes | chromatin |
R3008 | T4080 | T4213 | themeOf | DNA-bound,other DNA-bound transcription factors |
R3023 | T4175 | T4213 | themeOf | other DNA-bound transcription factors,other DNA-bound transcription factors |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3034 | 245-246 | . | denotes | . |
T3033 | 236-245 | NNS | denotes | complexes |
T3032 | 223-235 | NN | denotes | multiprotein |
T3031 | 215-222 | VBN | denotes | defined |
T3030 | 204-214 | RB | denotes | sterically |
T3029 | 202-203 | , | denotes | , |
T3028 | 196-202 | JJ | denotes | active |
T3027 | 183-195 | RB | denotes | biologically |
T3026 | 178-182 | IN | denotes | into |
T3025 | 170-177 | NNS | denotes | factors |
T3024 | 156-169 | NN | denotes | transcription |
T3023 | 146-155 | JJ | denotes | DNA-bound |
T3022 | 140-145 | JJ | denotes | other |
T3021 | 129-139 | VBG | denotes | assembling |
T3020 | 125-128 | CC | denotes | and |
T3019 | 115-124 | NN | denotes | structure |
T3018 | 105-114 | NN | denotes | chromatin |
T3017 | 99-104 | JJ | denotes | local |
T3016 | 88-98 | VBG | denotes | organizing |
T3015 | 85-87 | IN | denotes | by |
T3014 | 76-84 | NNS | denotes | proteins |
T3013 | 62-75 | JJ | denotes | architectural |
T3012 | 59-61 | IN | denotes | as |
T3011 | 50-58 | NN | denotes | function |
T3010 | 44-49 | PRP$ | denotes | their |
T3009 | 41-43 | IN | denotes | of |
T3008 | 36-40 | NN | denotes | part |
T3007 | 28-35 | VB | denotes | perform |
T3006 | 24-27 | MD | denotes | may |
T3005 | 15-23 | NNS | denotes | proteins |
T3004 | 11-14 | NNP | denotes | Sox |
T3003 | 9-10 | , | denotes | , |
T3002 | 0-9 | RB | denotes | Therefore |
R1939 | T3023 | T3025 | amod | DNA-bound,factors |
R1944 | T3024 | T3025 | compound | transcription,factors |
R1948 | T3025 | T3021 | dobj | factors,assembling |
R1951 | T3026 | T3021 | prep | into,assembling |
R1955 | T3027 | T3028 | advmod | biologically,active |
R1959 | T3028 | T3033 | amod | active,complexes |
R1964 | T3029 | T3033 | punct | ",",complexes |
R1967 | T3030 | T3031 | advmod | sterically,defined |
R1971 | T3031 | T3033 | amod | defined,complexes |
R1974 | T3032 | T3033 | compound | multiprotein,complexes |
R1977 | T3033 | T3026 | pobj | complexes,into |
R1984 | T3034 | T3007 | punct | .,perform |
R2027 | T3002 | T3007 | advmod | Therefore,perform |
R2029 | T3003 | T3007 | punct | ",",perform |
R2030 | T3004 | T3005 | compound | Sox,proteins |
R2031 | T3005 | T3007 | nsubj | proteins,perform |
R2033 | T3006 | T3007 | aux | may,perform |
R2034 | T3007 | T3007 | ROOT | perform,perform |
R2035 | T3008 | T3007 | dobj | part,perform |
R2037 | T3009 | T3008 | prep | of,part |
R2038 | T3010 | T3011 | poss | their,function |
R2040 | T3011 | T3009 | pobj | function,of |
R2041 | T3012 | T3007 | prep | as,perform |
R2042 | T3013 | T3014 | amod | architectural,proteins |
R2044 | T3014 | T3012 | pobj | proteins,as |
R2045 | T3015 | T3007 | prep | by,perform |
R2046 | T3016 | T3015 | pcomp | organizing,by |
R2048 | T3017 | T3019 | amod | local,structure |
R2049 | T3018 | T3019 | compound | chromatin,structure |
R2051 | T3019 | T3016 | dobj | structure,organizing |
R2052 | T3020 | T3016 | cc | and,organizing |
R2053 | T3021 | T3016 | conj | assembling,organizing |
R2055 | T3022 | T3025 | amod | other,factors |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1508 | 11-23 | Protein | denotes | Sox proteins |