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PMC:1359074 / 29673-29798 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12574 122-124 NN denotes WT
T12573 117-121 IN denotes with
T12572 108-116 VB denotes compared
T12571 106-107 -COMMA- denotes ,
T12570 95-106 NN denotes homozygotes
T12569 89-94 NN denotes p100H
T12568 86-88 IN denotes in
T12567 79-85 JJ denotes higher
T12566 74-78 RB denotes also
T12565 70-73 VB denotes are
T12564 68-69 -RRB- denotes )
T12563 65-68 NN denotes βh1
T12562 61-64 CC denotes and
T12561 59-60 NN denotes ζ
T12560 58-59 -LRB- denotes (
T12559 52-57 NN denotes genes
T12558 45-51 NN denotes globin
T12557 35-44 JJ denotes embryonic
T12556 29-34 JJ denotes other
T12555 25-28 CD denotes two
T12554 22-24 IN denotes of
T12553 15-21 NN denotes levels
T12552 4-14 NN denotes expression
T12551 0-3 DT denotes The
R8433 T12553 T12551 arg1Of levels,The
R8434 T12553 T12552 arg1Of levels,expression
R8435 T12553 T12554 arg1Of levels,of
R8436 T12553 T12565 arg1Of levels,are
R8437 T12553 T12567 arg1Of levels,higher
R8438 T12559 T12554 arg2Of genes,of
R8439 T12559 T12555 arg1Of genes,two
R8440 T12559 T12556 arg1Of genes,other
R8441 T12559 T12557 arg1Of genes,embryonic
R8442 T12559 T12558 arg1Of genes,globin
R8443 T12559 T12560 arg1Of genes,(
R8444 T12561 T12562 arg1Of ζ,and
R8445 T12562 T12560 arg2Of and,(
R8446 T12563 T12562 arg2Of βh1,and
R8447 T12564 T12560 arg3Of ),(
R8448 T12565 T12566 arg1Of are,also
R8449 T12565 T12571 arg1Of are,","
R8450 T12565 T12572 arg1Of are,compared
R8451 T12567 T12565 arg2Of higher,are
R8452 T12567 T12568 arg1Of higher,in
R8453 T12570 T12568 arg2Of homozygotes,in
R8454 T12570 T12569 arg1Of homozygotes,p100H
R8455 T12573 T12572 arg2Of with,compared
R8456 T12574 T12573 arg2Of WT,with

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T11460 65-68 Antecedent denotes βh1
T11459 59-60 Antecedent denotes ζ
T11458 35-57 Anaphor denotes embryonic globin genes
R7678 T11458 T11460 boundBy embryonic globin genes,βh1
R7677 T11458 T11459 boundBy embryonic globin genes,ζ

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T11516 65-68 Protein denotes βh1
T11515 59-60 Protein denotes ζ

GO-BP

Id Subject Object Predicate Lexical cue
T11215 45-51 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

GO-MF

Id Subject Object Predicate Lexical cue
T11565 45-51 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

sentences

Id Subject Object Predicate Lexical cue
T11176 0-125 Sentence denotes The expression levels of two other embryonic globin genes (ζ and βh1) are also higher in p100H homozygotes, compared with WT.
T225 0-125 Sentence denotes The expression levels of two other embryonic globin genes (ζ and βh1) are also higher in p100H homozygotes, compared with WT.

simple1

Id Subject Object Predicate Lexical cue
T11780 65-68 Protein denotes βh1
T11779 59-60 Protein denotes ζ

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T15816 4-14 Gene_expression denotes expression
T15815 79-85 Positive_regulation denotes higher
T15751 65-68 Protein denotes βh1
T15750 59-60 Protein denotes ζ
R11056 T15750 T15816 themeOf ζ,expression
R11058 T15751 T15815 themeOf βh1,higher
R11061 T15751 T15816 themeOf βh1,expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T13406 4-14 Gene_expression denotes expression
T13341 65-68 Protein denotes βh1
T13340 59-60 Protein denotes ζ
R9183 T13340 T13406 themeOf ζ,expression
R9186 T13341 T13406 themeOf βh1,expression

DLUT931

Id Subject Object Predicate Lexical cue
T13663 79-85 Positive_regulation denotes higher
T13662 4-14 Gene_expression denotes expression
T13587 65-68 Protein denotes βh1
T13586 59-60 Protein denotes ζ
R9340 T13662 T13663 themeOf expression,higher
R9341 T13662 T13663 themeOf expression,higher
R9342 T13586 T13662 themeOf ζ,expression
R9343 T13586 T13663 themeOf ζ,higher
R9344 T13587 T13662 themeOf βh1,expression
R9345 T13587 T13663 themeOf βh1,higher

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T15518 45-51 Protein denotes globin
T15487 25-57 Protein denotes two other embryonic globin genes
T15467 59-60 Protein denotes ζ
T15452 89-107 Entity denotes p100H homozygotes,
T15649 25-57 Protein denotes two other embryonic globin genes
T15618 65-68 Protein denotes βh1

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T14593 124-125 . denotes .
T14592 122-124 NNP denotes WT
T14591 117-121 IN denotes with
T14590 108-116 VBN denotes compared
T14589 106-107 , denotes ,
T14588 95-106 NNS denotes homozygotes
T14587 89-94 JJ denotes p100H
T14586 86-88 IN denotes in
T14585 79-85 JJR denotes higher
T14584 74-78 RB denotes also
T14583 70-73 VBP denotes are
T14582 68-69 -RRB- denotes )
T14581 65-68 CD denotes βh1
T14580 61-64 CC denotes and
T14579 59-60 NN denotes ζ
T14578 58-59 -LRB- denotes (
T14577 52-57 NNS denotes genes
T14576 45-51 NN denotes globin
T14575 35-44 JJ denotes embryonic
T14574 29-34 JJ denotes other
T14573 25-28 CD denotes two
T14572 22-24 IN denotes of
T14571 15-21 NNS denotes levels
T14570 4-14 NN denotes expression
T14569 0-3 DT denotes The
R10149 T14569 T14571 det The,levels
R10150 T14570 T14571 compound expression,levels
R10152 T14571 T14583 nsubj levels,are
R10153 T14572 T14571 prep of,levels
R10154 T14573 T14577 nummod two,genes
R10156 T14574 T14577 amod other,genes
R10157 T14575 T14577 amod embryonic,genes
R10158 T14576 T14577 compound globin,genes
R10160 T14577 T14572 pobj genes,of
R10161 T14578 T14577 punct (,genes
R10163 T14579 T14577 appos ζ,genes
R10164 T14580 T14579 cc and,ζ
R10166 T14581 T14579 conj βh1,ζ
R10167 T14582 T14577 punct ),genes
R10169 T14583 T14583 ROOT are,are
R10170 T14584 T14583 advmod also,are
R10172 T14585 T14583 acomp higher,are
R10173 T14586 T14585 prep in,higher
R10174 T14587 T14588 amod p100H,homozygotes
R10176 T14588 T14586 pobj homozygotes,in
R10177 T14589 T14583 punct ",",are
R10178 T14590 T14583 prep compared,are
R10180 T14591 T14590 prep with,compared
R10181 T14592 T14591 pobj WT,with
R10182 T14593 T14583 punct .,are

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T13479 4-14 Gene_expression denotes expression
T13478 4-14 Gene_expression denotes expression
T13477 122-124 Protein denotes WT
T13476 89-106 Protein denotes p100H homozygotes
T13475 59-68 Protein denotes ζ and βh1
T13474 45-57 Protein denotes globin genes
T13481 15-21 Positive_regulation denotes levels
T13480 15-21 Positive_regulation denotes levels
R9243 T13474 T13478 themeOf globin genes,expression
R9244 T13475 T13479 themeOf ζ and βh1,expression
R9245 T13478 T13480 themeOf expression,levels
R9246 T13479 T13481 themeOf expression,levels

testone

Id Subject Object Predicate Lexical cue
T10833 65-68 Protein denotes βh1
T10832 59-60 Protein denotes ζ
T10908 4-14 Gene_expression denotes expression
R7465 T10833 T10908 themeOf βh1,expression

test3

Id Subject Object Predicate Lexical cue
T11100 65-68 Protein denotes βh1
T11099 59-60 Protein denotes ζ
T10978 65-68 Protein denotes βh1
T10977 59-60 Protein denotes ζ