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PMC:1359074 / 2855-3068 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
16462943-15721738-85760951 210-211 15721738 denotes 1
T25472 210-211 15721738 denotes 1

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1737 211-212 -RRB- denotes ]
T1736 210-211 CD denotes 1
T1735 209-210 -LRB- denotes [
T1734 201-208 NN denotes binding
T1733 197-200 CC denotes and
T1732 185-196 NN denotes recognition
T1731 181-184 NN denotes DNA
T1730 178-180 IN denotes in
T1729 169-177 VB denotes involved
T1728 163-168 NN denotes acids
T1727 157-162 NN denotes amino
T1726 154-156 CD denotes 79
T1725 151-153 IN denotes of
T1724 140-150 VB denotes consisting
T1723 138-139 -COMMA- denotes ,
T1722 132-138 NN denotes domain
T1721 130-131 -RRB- denotes )
T1720 127-130 NN denotes HMG
T1719 126-127 -LRB- denotes (
T1718 120-125 NN denotes group
T1717 111-119 NN denotes mobility
T1716 106-110 JJ denotes high
T1715 96-105 VB denotes conserved
T1714 92-95 DT denotes the
T1713 89-91 IN denotes by
T1712 75-88 VB denotes characterized
T1711 68-74 NN denotes family
T1710 61-67 NN denotes factor
T1709 47-60 NN denotes transcription
T1708 43-46 NN denotes Sox
T1707 39-42 DT denotes the
T1706 36-38 IN denotes of
T1705 29-35 NN denotes member
T1704 27-28 DT denotes a
T1703 24-26 VB denotes is
T1702 22-23 -RRB- denotes )
T1701 18-22 NN denotes Sox6
T1700 17-18 -LRB- denotes (
T1699 13-16 NN denotes box
T1698 9-12 NN denotes HMG
T1697 4-8 NN denotes type
T1696 0-3 NN denotes Sry
R811 T1705 T1704 arg1Of member,a
R812 T1705 T1706 arg1Of member,of
R813 T1711 T1706 arg2Of family,of
R814 T1711 T1707 arg1Of family,the
R815 T1711 T1708 arg1Of family,Sox
R816 T1711 T1709 arg1Of family,transcription
R817 T1711 T1710 arg1Of family,factor
R818 T1711 T1712 arg2Of family,characterized
R819 T1720 T1719 arg2Of HMG,(
R820 T1721 T1719 arg3Of ),(
R821 T1722 T1712 arg1Of domain,characterized
R822 T1722 T1713 arg2Of domain,by
R823 T1722 T1714 arg1Of domain,the
R824 T1722 T1715 arg2Of domain,conserved
R825 T1722 T1716 arg1Of domain,high
R826 T1722 T1717 arg1Of domain,mobility
R827 T1722 T1718 arg1Of domain,group
R828 T1722 T1719 arg1Of domain,(
R829 T1722 T1723 arg1Of domain,","
R830 T1722 T1724 arg1Of domain,consisting
R831 T1724 T1725 arg1Of consisting,of
R832 T1728 T1725 arg2Of acids,of
R833 T1728 T1726 arg1Of acids,79
R834 T1728 T1727 arg1Of acids,amino
R835 T1728 T1729 arg2Of acids,involved
R836 T1729 T1730 arg1Of involved,in
R837 T1729 T1735 arg1Of involved,[
R838 T1732 T1733 arg1Of recognition,and
R839 T1733 T1730 arg2Of and,in
R840 T1733 T1731 arg1Of and,DNA
R841 T1734 T1733 arg2Of binding,and
R842 T1736 T1735 arg2Of 1,[
R843 T1737 T1735 arg3Of ],[
R803 T1699 T1696 arg1Of box,Sry
R804 T1699 T1697 arg1Of box,type
R805 T1699 T1698 arg1Of box,HMG
R806 T1699 T1700 arg1Of box,(
R807 T1699 T1703 arg1Of box,is
R808 T1701 T1700 arg2Of Sox6,(
R809 T1702 T1700 arg3Of ),(
R810 T1705 T1703 arg2Of member,is

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T1416 18-22 Protein denotes Sox6
T1415 0-3 Protein denotes Sry

GO-BP

Id Subject Object Predicate Lexical cue
T1235 47-60 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

GO-MF

Id Subject Object Predicate Lexical cue
T1469 201-208 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T1200 0-213 Sentence denotes Sry type HMG box (Sox6) is a member of the Sox transcription factor family characterized by the conserved high mobility group (HMG) domain, consisting of 79 amino acids involved in DNA recognition and binding [1].
T20 0-213 Sentence denotes Sry type HMG box (Sox6) is a member of the Sox transcription factor family characterized by the conserved high mobility group (HMG) domain, consisting of 79 amino acids involved in DNA recognition and binding [1].

simple1

Id Subject Object Predicate Lexical cue
T1643 18-22 Protein denotes Sox6
T1642 0-3 Protein denotes Sry

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T4221 18-22 Protein denotes Sox6
T4220 0-3 Protein denotes Sry

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T2685 18-22 Protein denotes Sox6
T2684 0-3 Protein denotes Sry

DLUT931

Id Subject Object Predicate Lexical cue
T2816 201-208 Binding denotes binding
T2763 18-22 Protein denotes Sox6
T2762 0-3 Protein denotes Sry
R1840 T2762 T2816 themeOf Sry,binding
R1844 T2763 T2816 themeOf Sox6,binding

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4119 0-3 Protein denotes Sry
T4112 154-177 Entity denotes 79 amino acids involved
T4098 181-184 Entity denotes DNA
T4070 39-74 Protein denotes the Sox transcription factor family
T4034 43-46 Protein denotes Sox
T4147 18-22 Protein denotes Sox6
T4137 157-162 Entity denotes amino
T4130 132-139 Entity denotes domain,
T4171 0-23 Entity denotes Sry type HMG box (Sox6)

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2955 212-213 . denotes .
T2954 211-212 NNP denotes ]
T2953 210-211 CD denotes 1
T2952 209-210 NN denotes [
T2951 201-208 JJ denotes binding
T2950 197-200 CC denotes and
T2949 185-196 NN denotes recognition
T2948 181-184 NNP denotes DNA
T2947 178-180 IN denotes in
T2946 169-177 VBN denotes involved
T2945 163-168 NNS denotes acids
T2944 157-162 JJ denotes amino
T2943 154-156 CD denotes 79
T2942 151-153 IN denotes of
T2941 140-150 VBG denotes consisting
T2940 138-139 , denotes ,
T2939 132-138 NN denotes domain
T2938 130-131 -RRB- denotes )
T2937 127-130 NNP denotes HMG
T2936 126-127 -LRB- denotes (
T2935 120-125 NN denotes group
T2934 111-119 NN denotes mobility
T2933 106-110 JJ denotes high
T2932 96-105 JJ denotes conserved
T2931 92-95 DT denotes the
T2930 89-91 IN denotes by
T2929 75-88 VBN denotes characterized
T2928 68-74 NN denotes family
T2927 61-67 NN denotes factor
T2926 47-60 NN denotes transcription
T2925 43-46 NNPS denotes Sox
T2924 39-42 DT denotes the
T2923 36-38 IN denotes of
T2922 29-35 NN denotes member
T2921 27-28 DT denotes a
T2920 24-26 VBZ denotes is
T2919 22-23 -RRB- denotes )
T2918 18-22 NNP denotes Sox6
T2917 17-18 -LRB- denotes (
T2916 13-16 NN denotes box
T2915 9-12 NNP denotes HMG
T2914 4-8 NN denotes type
T2913 0-3 NNP denotes Sry
R1907 T2913 T2916 compound Sry,box
R1909 T2914 T2916 compound type,box
R1914 T2915 T2916 compound HMG,box
R1918 T2916 T2920 nsubj box,is
R1921 T2917 T2918 punct (,Sox6
R1922 T2918 T2916 appos Sox6,box
R1923 T2919 T2916 punct ),box
R1924 T2920 T2920 ROOT is,is
R1925 T2921 T2922 det a,member
R1926 T2922 T2920 attr member,is
R1927 T2926 T2927 compound transcription,factor
R1928 T2923 T2922 prep of,member
R1929 T2927 T2928 compound factor,family
R1930 T2928 T2923 pobj family,of
R1931 T2929 T2922 acl characterized,member
R1932 T2924 T2928 det the,family
R1933 T2930 T2929 agent by,characterized
R1934 T2931 T2935 det the,group
R1935 T2925 T2928 compound Sox,family
R1936 T2932 T2935 amod conserved,group
R1937 T2933 T2935 amod high,group
R1938 T2934 T2935 compound mobility,group
R1940 T2935 T2930 pobj group,by
R1941 T2936 T2937 punct (,HMG
R1942 T2937 T2935 appos HMG,group
R1943 T2938 T2937 punct ),HMG
R1945 T2939 T2935 conj domain,group
R1946 T2940 T2935 punct ",",group
R1947 T2941 T2935 acl consisting,group
R1949 T2942 T2941 prep of,consisting
R1950 T2943 T2945 nummod 79,acids
R1952 T2944 T2945 compound amino,acids
R1953 T2945 T2942 pobj acids,of
R1954 T2946 T2945 acl involved,acids
R1956 T2947 T2946 prep in,involved
R1957 T2948 T2949 compound DNA,recognition
R1958 T2949 T2947 pobj recognition,in
R1960 T2950 T2949 cc and,recognition
R1961 T2951 T2952 amod binding,[
R1962 T2952 T2949 conj [,recognition
R1963 T2953 T2954 nummod 1,]
R1965 T2954 T2952 appos ],[
R1966 T2955 T2920 punct .,is

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1505 29-35 Binding denotes member
T1504 29-35 Binding denotes member
T1503 29-35 Binding denotes member
T1502 43-74 Protein denotes Sox transcription factor family
T1501 18-22 Protein denotes Sox6
T1500 0-16 Protein denotes Sry type HMG box
R753 T1500 T1504 themeOf Sry type HMG box,member
R754 T1501 T1503 themeOf Sox6,member
R755 T1501 T1505 themeOf Sox6,member
R756 T1502 T1504 themeOf Sox transcription factor family,member
R757 T1502 T1505 themeOf Sox transcription factor family,member

testone

Id Subject Object Predicate Lexical cue
T1032 201-208 Binding denotes binding
T979 18-22 Protein denotes Sox6
T978 0-3 Protein denotes Sry
R597 T978 T1032 themeOf Sry,binding
R598 T979 T978 equivalentTo Sox6,Sry

test3

Id Subject Object Predicate Lexical cue
T1121 18-22 Protein denotes Sox6
T1120 0-3 Protein denotes Sry
T1067 18-22 Protein denotes Sox6
T1066 0-3 Protein denotes Sry