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PMC:1359074 / 27406-27567 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
16462943-12093744-85761004 140-142 12093744 denotes 37
16462943-9927428-85761005 157-159 9927428 denotes 38
T17962 140-142 12093744 denotes 37
T91162 157-159 9927428 denotes 38

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12191 159-160 -RRB- denotes ]
T12190 157-159 CD denotes 38
T12189 156-157 -LRB- denotes [
T12188 148-155 NN denotes COUP-TF
T12187 144-147 CC denotes and
T12186 142-143 -RRB- denotes ]
T12185 140-142 CD denotes 37
T12184 139-140 -LRB- denotes [
T12183 131-138 NN denotes complex
T12182 126-130 JJ denotes DRED
T12181 122-125 DT denotes the
T12180 112-121 VB denotes including
T12179 110-111 -COMMA- denotes ,
T12178 105-110 NN denotes sites
T12177 95-104 NN denotes consensus
T12176 86-94 NN denotes Sox/Sox6
T12175 82-85 DT denotes the
T12174 77-81 IN denotes near
T12173 67-76 NN denotes sequences
T12172 63-66 NN denotes DNA
T12171 60-62 TO denotes to
T12170 55-59 VB denotes bind
T12169 52-54 TO denotes to
T12168 43-51 VB denotes reported
T12167 38-42 VB denotes been
T12166 33-37 VB denotes have
T12165 22-32 NN denotes repressors
T12164 15-21 NN denotes globin
T12163 12-14 JJ denotes ɛy
T12162 6-11 JJ denotes other
T12161 2-5 JJ denotes few
T12160 0-1 DT denotes A
R8030 T12165 T12160 arg1Of repressors,A
R8031 T12165 T12161 arg1Of repressors,few
R8032 T12165 T12162 arg1Of repressors,other
R8033 T12165 T12163 arg1Of repressors,ɛy
R8034 T12165 T12164 arg1Of repressors,globin
R8035 T12165 T12166 arg1Of repressors,have
R8036 T12165 T12167 arg1Of repressors,been
R8037 T12165 T12168 arg2Of repressors,reported
R8038 T12165 T12170 arg1Of repressors,bind
R8039 T12168 T12166 arg2Of reported,have
R8040 T12168 T12167 arg2Of reported,been
R8041 T12170 T12168 arg3Of bind,reported
R8042 T12170 T12169 arg1Of bind,to
R8043 T12170 T12171 arg1Of bind,to
R8044 T12173 T12171 arg2Of sequences,to
R8045 T12173 T12172 arg1Of sequences,DNA
R8046 T12173 T12174 arg1Of sequences,near
R8047 T12178 T12174 arg2Of sites,near
R8048 T12178 T12175 arg1Of sites,the
R8049 T12178 T12176 arg1Of sites,Sox/Sox6
R8050 T12178 T12177 arg1Of sites,consensus
R8051 T12178 T12179 arg1Of sites,","
R8052 T12178 T12180 arg1Of sites,including
R8053 T12183 T12181 arg1Of complex,the
R8054 T12183 T12182 arg1Of complex,DRED
R8055 T12183 T12184 arg1Of complex,[
R8056 T12183 T12187 arg1Of complex,and
R8057 T12185 T12184 arg2Of 37,[
R8058 T12186 T12184 arg3Of ],[
R8059 T12187 T12180 arg2Of and,including
R8060 T12188 T12187 arg2Of COUP-TF,and
R8061 T12188 T12189 arg1Of COUP-TF,[
R8062 T12190 T12189 arg2Of 38,[
R8063 T12191 T12189 arg3Of ],[

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T11452 153-155 Antecedent denotes TF
T11451 148-152 Antecedent denotes COUP
T11450 126-130 Antecedent denotes DRED

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T11489 153-155 Protein denotes TF
T11488 148-152 Protein denotes COUP
T11487 126-130 Protein denotes DRED
T11486 12-21 Protein denotes ɛy globin

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T13262 90-94 http://www.uniprot.org/uniprot/P35712 denotes Sox6

GO-BP

Id Subject Object Predicate Lexical cue
T11208 15-21 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

GO-MF

Id Subject Object Predicate Lexical cue
T11558 15-21 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

sentences

Id Subject Object Predicate Lexical cue
T11162 0-161 Sentence denotes A few other ɛy globin repressors have been reported to bind to DNA sequences near the Sox/Sox6 consensus sites, including the DRED complex [37] and COUP-TF [38].
T211 0-161 Sentence denotes A few other ɛy globin repressors have been reported to bind to DNA sequences near the Sox/Sox6 consensus sites, including the DRED complex [37] and COUP-TF [38].

simple1

Id Subject Object Predicate Lexical cue
T11753 153-155 Protein denotes TF
T11752 148-152 Protein denotes COUP
T11751 126-130 Protein denotes DRED
T11750 12-21 Protein denotes ɛy globin

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T15800 55-59 Binding denotes bind
T15724 153-155 Protein denotes TF
T15723 148-152 Protein denotes COUP
T15722 126-130 Protein denotes DRED
T15721 12-21 Protein denotes ɛy globin
R11011 T15721 T15800 themeOf ɛy globin,bind
R11012 T15721 T15800 themeOf ɛy globin,bind
R11013 T15721 T15800 themeOf ɛy globin,bind
R11014 T15722 T15800 themeOf DRED,bind
R11015 T15723 T15800 themeOf COUP,bind
R11016 T15724 T15800 themeOf TF,bind

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T13388 55-59 Binding denotes bind
T13314 153-155 Protein denotes TF
T13313 148-152 Protein denotes COUP
T13312 126-130 Protein denotes DRED
T13311 12-21 Protein denotes ɛy globin
R9187 T13312 T13388 themeOf DRED,bind
R9189 T13313 T13388 themeOf COUP,bind

DLUT931

Id Subject Object Predicate Lexical cue
T13640 55-59 Binding denotes bind
T13560 153-155 Protein denotes TF
T13559 148-152 Protein denotes COUP
T13558 126-130 Protein denotes DRED
T13557 12-21 Protein denotes ɛy globin
R9288 T13557 T13640 themeOf ɛy globin,bind
R9289 T13560 T13640 themeOf TF,bind

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T15586 90-94 Protein denotes Sox6
T15562 122-143 Protein denotes the DRED complex [37]
T15524 86-94 Protein denotes Sox/Sox6
T15511 122-143 Entity denotes the DRED complex [37]
T15477 148-160 Protein denotes COUP-TF [38]
T15475 15-21 Protein denotes globin
T15443 105-111 Entity denotes sites,
T15667 63-66 Entity denotes DNA
T15655 86-94 Protein denotes Sox/Sox6
T15654 0-32 Protein denotes A few other ɛy globin repressors
T15616 148-160 Protein denotes COUP-TF [38]

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T14193 160-161 . denotes .
T14192 159-160 NNP denotes ]
T14191 157-159 CD denotes 38
T14190 156-157 NNP denotes [
T14189 148-155 NNP denotes COUP-TF
T14188 144-147 CC denotes and
T14187 142-143 NNP denotes ]
T14186 140-142 CD denotes 37
T14185 139-140 NNP denotes [
T14184 131-138 JJ denotes complex
T14183 126-130 NNP denotes DRED
T14182 122-125 DT denotes the
T14181 112-121 VBG denotes including
T14180 110-111 , denotes ,
T14179 105-110 NNS denotes sites
T14178 95-104 NN denotes consensus
T14177 86-94 NNP denotes Sox/Sox6
T14176 82-85 DT denotes the
T14175 77-81 IN denotes near
T14174 67-76 NNS denotes sequences
T14173 63-66 NNP denotes DNA
T14172 60-62 TO denotes to
T14171 55-59 NN denotes bind
T14170 52-54 TO denotes to
T14169 43-51 VBN denotes reported
T14168 38-42 VBN denotes been
T14167 33-37 VBP denotes have
T14166 22-32 NNS denotes repressors
T14165 15-21 NN denotes globin
T14164 12-14 JJ denotes ɛy
T14163 6-11 JJ denotes other
T14162 2-5 JJ denotes few
T14161 0-1 DT denotes A
R9717 T14161 T14166 det A,repressors
R9718 T14162 T14166 amod few,repressors
R9720 T14163 T14166 amod other,repressors
R9721 T14164 T14166 amod ɛy,repressors
R9723 T14165 T14166 compound globin,repressors
R9724 T14166 T14169 nsubjpass repressors,reported
R9725 T14167 T14169 aux have,reported
R9726 T14168 T14169 auxpass been,reported
R9728 T14169 T14169 ROOT reported,reported
R9729 T14170 T14171 aux to,bind
R9731 T14171 T14169 xcomp bind,reported
R9736 T14172 T14171 prep to,bind
R9738 T14173 T14174 compound DNA,sequences
R9739 T14174 T14172 pobj sequences,to
R9740 T14175 T14174 prep near,sequences
R9742 T14176 T14179 det the,sites
R9743 T14177 T14179 compound Sox/Sox6,sites
R9745 T14178 T14179 compound consensus,sites
R9746 T14179 T14175 pobj sites,near
R9747 T14180 T14179 punct ",",sites
R9749 T14181 T14179 prep including,sites
R9750 T14182 T14187 det the,]
R9751 T14183 T14187 nmod DRED,]
R9753 T14184 T14187 amod complex,]
R9754 T14185 T14187 nmod [,]
R9756 T14186 T14187 nummod 37,]
R9757 T14187 T14181 pobj ],including
R9759 T14188 T14187 cc and,]
R9760 T14189 T14190 compound COUP-TF,[
R9761 T14190 T14187 conj [,]
R9762 T14191 T14192 nummod 38,]
R9763 T14192 T14187 conj ],]
R9765 T14193 T14169 punct .,reported

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T13436 55-59 Binding denotes bind
T13435 90-94 Protein denotes Sox6
T13434 86-89 Protein denotes Sox
T13433 15-32 Protein denotes globin repressors
R9207 T13433 T13436 themeOf globin repressors,bind

testone

Id Subject Object Predicate Lexical cue
T10806 153-155 Protein denotes TF
T10805 148-152 Protein denotes COUP
T10804 126-130 Protein denotes DRED
T10803 12-21 Protein denotes ɛy globin
T10891 55-59 Binding denotes bind
R7444 T10803 T10891 themeOf ɛy globin,bind
R7445 T10804 T10891 themeOf DRED,bind
R7446 T10805 T10891 themeOf COUP,bind
R7447 T10806 T10891 themeOf TF,bind

test3

Id Subject Object Predicate Lexical cue
T11057 153-155 Protein denotes TF
T11056 148-152 Protein denotes COUP
T11055 126-130 Protein denotes DRED
T11054 55-59 Binding denotes bind
T11053 12-21 Protein denotes ɛy globin
T10951 153-155 Protein denotes TF
T10950 148-152 Protein denotes COUP
T10949 126-130 Protein denotes DRED
T10948 12-21 Protein denotes ɛy globin
R7504 T11053 T11054 themeOf ɛy globin,bind
R7505 T11053 T11056 themeOf ɛy globin,COUP
R7506 T11055 T11056 themeOf DRED,COUP
R7507 T11055 T11054 themeOf DRED,bind
R7508 T11057 T11054 themeOf TF,bind