PMC:1359074 / 27223-27405
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T12159 | 174-181 | NN | denotes | complex |
T12158 | 167-173 | NN | denotes | weight |
T12157 | 157-166 | JJ | denotes | molecular |
T12156 | 152-156 | JJ | denotes | high |
T12155 | 150-151 | DT | denotes | a |
T12154 | 147-149 | IN | denotes | of |
T12153 | 142-146 | NN | denotes | part |
T12152 | 139-141 | VB | denotes | is |
T12151 | 134-138 | NN | denotes | Sox6 |
T12150 | 129-133 | IN | denotes | that |
T12149 | 118-128 | VB | denotes | suggesting |
T12148 | 116-117 | -COMMA- | denotes | , |
T12147 | 112-116 | NN | denotes | band |
T12146 | 96-111 | JJ | denotes | Sox6-associated |
T12145 | 92-95 | DT | denotes | the |
T12144 | 85-91 | VB | denotes | detect |
T12143 | 82-84 | TO | denotes | to |
T12142 | 80-81 | NN | denotes | h |
T12141 | 76-79 | CD | denotes | 4–8 |
T12140 | 70-75 | JJ | denotes | least |
T12139 | 67-69 | IN | denotes | at |
T12138 | 63-66 | IN | denotes | for |
T12137 | 59-62 | NN | denotes | gel |
T12136 | 57-58 | NN | denotes | % |
T12135 | 55-57 | CD | denotes | –6 |
T12134 | 54-55 | NN | denotes | % |
T12133 | 53-54 | CD | denotes | 4 |
T12132 | 51-52 | DT | denotes | a |
T12131 | 48-50 | IN | denotes | on |
T12130 | 32-47 | NN | denotes | electrophoresis |
T12129 | 28-31 | DT | denotes | the |
T12128 | 24-27 | VB | denotes | run |
T12127 | 21-23 | TO | denotes | to |
T12126 | 17-20 | VB | denotes | had |
T12125 | 14-16 | PRP | denotes | we |
T12124 | 12-13 | -COMMA- | denotes | , |
T12123 | 7-12 | NN | denotes | EMSAs |
T12122 | 3-6 | PRP-DOLLAR- | denotes | our |
T12121 | 0-2 | IN | denotes | In |
R7991 | T12123 | T12121 | arg2Of | EMSAs,In |
R7992 | T12123 | T12122 | arg1Of | EMSAs,our |
R7993 | T12125 | T12126 | arg1Of | we,had |
R7994 | T12125 | T12128 | arg1Of | we,run |
R7995 | T12126 | T12121 | arg1Of | had,In |
R7996 | T12126 | T12124 | arg1Of | had,"," |
R7997 | T12128 | T12126 | arg2Of | run,had |
R7998 | T12128 | T12127 | arg1Of | run,to |
R7999 | T12128 | T12131 | arg1Of | run,on |
R8000 | T12128 | T12138 | arg1Of | run,for |
R8001 | T12128 | T12143 | modOf | run,to |
R8002 | T12128 | T12148 | arg1Of | run,"," |
R8003 | T12128 | T12149 | modOf | run,suggesting |
R8004 | T12130 | T12128 | arg2Of | electrophoresis,run |
R8005 | T12130 | T12129 | arg1Of | electrophoresis,the |
R8006 | T12135 | T12136 | arg1Of | –6,% |
R8007 | T12137 | T12131 | arg2Of | gel,on |
R8008 | T12137 | T12132 | arg1Of | gel,a |
R8009 | T12137 | T12133 | arg1Of | gel,4 |
R8010 | T12137 | T12134 | arg1Of | gel,% |
R8011 | T12137 | T12135 | arg1Of | gel,–6 |
R8012 | T12141 | T12139 | arg1Of | 4–8,at |
R8013 | T12141 | T12140 | arg1Of | 4–8,least |
R8014 | T12142 | T12138 | arg2Of | h,for |
R8015 | T12142 | T12141 | arg1Of | h,4–8 |
R8016 | T12144 | T12143 | arg1Of | detect,to |
R8017 | T12147 | T12144 | arg2Of | band,detect |
R8018 | T12147 | T12145 | arg1Of | band,the |
R8019 | T12147 | T12146 | arg1Of | band,Sox6-associated |
R8020 | T12151 | T12152 | arg1Of | Sox6,is |
R8021 | T12152 | T12149 | arg2Of | is,suggesting |
R8022 | T12152 | T12150 | arg1Of | is,that |
R8023 | T12153 | T12152 | arg2Of | part,is |
R8024 | T12153 | T12154 | arg1Of | part,of |
R8025 | T12159 | T12154 | arg2Of | complex,of |
R8026 | T12159 | T12155 | arg1Of | complex,a |
R8027 | T12159 | T12156 | arg1Of | complex,high |
R8028 | T12159 | T12157 | arg1Of | complex,molecular |
R8029 | T12159 | T12158 | arg1Of | complex,weight |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11485 | 134-138 | Protein | denotes | Sox6 |
T11484 | 96-100 | Protein | denotes | Sox6 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13261 | 134-138 | http://www.uniprot.org/uniprot/P35712 | denotes | Sox6 |
T13260 | 96-100 | http://www.uniprot.org/uniprot/P35712 | denotes | Sox6 |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11161 | 0-182 | Sentence | denotes | In our EMSAs, we had to run the electrophoresis on a 4%–6% gel for at least 4–8 h to detect the Sox6-associated band, suggesting that Sox6 is part of a high molecular weight complex. |
T210 | 0-182 | Sentence | denotes | In our EMSAs, we had to run the electrophoresis on a 4%–6% gel for at least 4–8 h to detect the Sox6-associated band, suggesting that Sox6 is part of a high molecular weight complex. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11749 | 134-138 | Protein | denotes | Sox6 |
T11748 | 96-100 | Protein | denotes | Sox6 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15720 | 134-138 | Protein | denotes | Sox6 |
T15719 | 96-100 | Protein | denotes | Sox6 |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13387 | 101-111 | Binding | denotes | associated |
T13310 | 134-138 | Protein | denotes | Sox6 |
T13309 | 96-100 | Protein | denotes | Sox6 |
R9185 | T13309 | T13387 | themeOf | Sox6,associated |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13639 | 101-111 | Binding | denotes | associated |
T13556 | 134-138 | Protein | denotes | Sox6 |
T13555 | 96-100 | Protein | denotes | Sox6 |
R9287 | T13555 | T13639 | themeOf | Sox6,associated |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15515 | 147-181 | Entity | denotes | of a high molecular weight complex |
T15482 | 51-62 | Entity | denotes | a 4%–6% gel |
T15663 | 129-138 | Protein | denotes | that Sox6 |
T15651 | 70-117 | Entity | denotes | least 4–8 h to detect the Sox6-associated band, |
T15643 | 96-111 | Protein | denotes | Sox6-associated |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T14160 | 181-182 | . | denotes | . |
T14159 | 174-181 | NN | denotes | complex |
T14158 | 167-173 | NN | denotes | weight |
T14157 | 157-166 | JJ | denotes | molecular |
T14156 | 152-156 | JJ | denotes | high |
T14155 | 150-151 | DT | denotes | a |
T14154 | 147-149 | IN | denotes | of |
T14153 | 142-146 | NN | denotes | part |
T14152 | 139-141 | VBZ | denotes | is |
T14151 | 134-138 | NNP | denotes | Sox6 |
T14150 | 129-133 | IN | denotes | that |
T14149 | 118-128 | VBG | denotes | suggesting |
T14148 | 116-117 | , | denotes | , |
T14147 | 112-116 | NN | denotes | band |
T14146 | 96-111 | JJ | denotes | Sox6-associated |
T14145 | 92-95 | DT | denotes | the |
T14144 | 85-91 | VB | denotes | detect |
T14143 | 82-84 | TO | denotes | to |
T14142 | 80-81 | NN | denotes | h |
T14141 | 78-79 | CD | denotes | 8 |
T14140 | 76-77 | CD | denotes | 4 |
T14139 | 70-75 | JJS | denotes | least |
T14138 | 67-69 | IN | denotes | at |
T14137 | 63-66 | IN | denotes | for |
T14136 | 59-62 | NN | denotes | gel |
T14135 | 57-58 | NN | denotes | % |
T14134 | 56-57 | CD | denotes | 6 |
T14133 | 54-55 | NN | denotes | % |
T14132 | 53-54 | CD | denotes | 4 |
T14131 | 51-52 | DT | denotes | a |
T14130 | 48-50 | IN | denotes | on |
T14129 | 32-47 | NN | denotes | electrophoresis |
T14128 | 28-31 | DT | denotes | the |
T14127 | 24-27 | VB | denotes | run |
T14126 | 21-23 | TO | denotes | to |
T14125 | 17-20 | VBD | denotes | had |
T14124 | 14-16 | PRP | denotes | we |
T14123 | 12-13 | , | denotes | , |
T14122 | 7-12 | NNS | denotes | EMSAs |
T14121 | 3-6 | PRP$ | denotes | our |
T14120 | 0-2 | IN | denotes | In |
R9658 | T14120 | T14125 | prep | In,had |
R9659 | T14121 | T14122 | poss | our,EMSAs |
R9660 | T14122 | T14120 | pobj | EMSAs,In |
R9661 | T14123 | T14125 | punct | ",",had |
R9663 | T14124 | T14125 | nsubj | we,had |
R9664 | T14125 | T14125 | ROOT | had,had |
R9666 | T14126 | T14127 | aux | to,run |
R9667 | T14127 | T14125 | xcomp | run,had |
R9668 | T14128 | T14129 | det | the,electrophoresis |
R9669 | T14129 | T14127 | dobj | electrophoresis,run |
R9671 | T14130 | T14127 | prep | on,run |
R9672 | T14131 | T14133 | det | a,% |
R9674 | T14132 | T14133 | nummod | 4,% |
R9675 | T14133 | T14136 | nmod | %,gel |
R9676 | T14134 | T14135 | nummod | 6,% |
R9678 | T14135 | T14136 | compound | %,gel |
R9681 | T14136 | T14130 | pobj | gel,on |
R9682 | T14137 | T14127 | prep | for,run |
R9684 | T14138 | T14139 | advmod | at,least |
R9685 | T14139 | T14140 | advmod | least,4 |
R9687 | T14140 | T14137 | pobj | 4,for |
R9688 | T14141 | T14142 | nummod | 8,h |
R9689 | T14142 | T14140 | appos | h,4 |
R9691 | T14143 | T14144 | aux | to,detect |
R9692 | T14144 | T14127 | advcl | detect,run |
R9696 | T14145 | T14147 | det | the,band |
R9697 | T14146 | T14147 | amod | Sox6-associated,band |
R9699 | T14147 | T14144 | dobj | band,detect |
R9701 | T14148 | T14125 | punct | ",",had |
R9702 | T14149 | T14125 | advcl | suggesting,had |
R9703 | T14150 | T14152 | mark | that,is |
R9704 | T14151 | T14152 | nsubj | Sox6,is |
R9706 | T14152 | T14149 | ccomp | is,suggesting |
R9707 | T14153 | T14152 | attr | part,is |
R9708 | T14154 | T14153 | prep | of,part |
R9709 | T14155 | T14159 | det | a,complex |
R9710 | T14156 | T14158 | amod | high,weight |
R9712 | T14157 | T14158 | amod | molecular,weight |
R9713 | T14158 | T14159 | compound | weight,complex |
R9714 | T14159 | T14154 | pobj | complex,of |
R9716 | T14160 | T14125 | punct | .,had |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13432 | 134-138 | Protein | denotes | Sox6 |
T13431 | 96-100 | Protein | denotes | Sox6 |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10802 | 134-138 | Protein | denotes | Sox6 |
T10801 | 96-100 | Protein | denotes | Sox6 |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11052 | 134-138 | Protein | denotes | Sox6 |
T11051 | 96-100 | Protein | denotes | Sox6 |
T10947 | 134-138 | Protein | denotes | Sox6 |
T10946 | 96-100 | Protein | denotes | Sox6 |