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PMC:1359074 / 25807-25938 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T11887 117-131 NN denotes erythropoiesis
T11886 106-116 JJ denotes definitive
T11885 103-105 IN denotes in
T11884 98-102 NN denotes gene
T11883 88-97 JJ denotes ɛy-globin
T11882 84-87 DT denotes the
T11881 74-83 VB denotes represses
T11880 70-73 CC denotes and
T11879 65-69 NN denotes gene
T11878 62-64 JJ denotes ɛy
T11877 59-61 IN denotes of
T11876 50-58 NN denotes promoter
T11875 41-49 JJ denotes proximal
T11874 37-40 DT denotes the
T11873 34-36 TO denotes to
T11872 28-33 VB denotes binds
T11871 24-27 CC denotes and
T11870 14-23 VB denotes regulates
T11869 5-13 RB denotes directly
T11868 0-4 NN denotes Sox6
R7739 T11868 T11870 arg1Of Sox6,regulates
R7740 T11868 T11872 arg1Of Sox6,binds
R7741 T11868 T11881 arg1Of Sox6,represses
R7742 T11870 T11871 arg1Of regulates,and
R7743 T11871 T11880 arg1Of and,and
R7744 T11872 T11871 arg2Of binds,and
R7745 T11872 T11873 arg1Of binds,to
R7746 T11876 T11873 arg2Of promoter,to
R7747 T11876 T11874 arg1Of promoter,the
R7748 T11876 T11875 arg1Of promoter,proximal
R7749 T11876 T11877 arg1Of promoter,of
R7750 T11879 T11877 arg2Of gene,of
R7751 T11879 T11878 arg1Of gene,ɛy
R7752 T11880 T11869 arg1Of and,directly
R7753 T11881 T11880 arg2Of represses,and
R7754 T11884 T11881 arg2Of gene,represses
R7755 T11884 T11882 arg1Of gene,the
R7756 T11884 T11883 arg1Of gene,ɛy-globin
R7757 T11884 T11885 arg1Of gene,in
R7758 T11887 T11885 arg2Of erythropoiesis,in
R7759 T11887 T11886 arg1Of erythropoiesis,definitive

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T11468 88-97 Protein denotes ɛy-globin
T11467 62-69 Protein denotes ɛy gene
T11466 0-4 Protein denotes Sox6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T13251 0-4 http://www.uniprot.org/uniprot/P35712 denotes Sox6

GO-BP

Id Subject Object Predicate Lexical cue
T11232 117-131 http://purl.obolibrary.org/obo/GO_0030218 denotes erythropoiesis
T11229 106-131 http://purl.obolibrary.org/obo/GO_0060318 denotes definitive erythropoiesis
T11207 91-97 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

GO-MF

Id Subject Object Predicate Lexical cue
T11557 91-97 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

simple1

Id Subject Object Predicate Lexical cue
T11732 88-97 Protein denotes ɛy-globin
T11731 62-69 Protein denotes ɛy gene
T11730 0-4 Protein denotes Sox6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T15793 14-23 Regulation denotes regulates
T15792 74-83 Negative_regulation denotes represses
T15791 28-33 Binding denotes binds
T15703 88-97 Protein denotes ɛy-globin
T15702 62-69 Protein denotes ɛy gene
T15701 0-4 Protein denotes Sox6
R11001 T15701 T15793 themeOf Sox6,regulates
R11002 T15701 T15791 themeOf Sox6,binds
R11003 T15702 T15791 themeOf ɛy gene,binds
R11004 T15703 T15792 themeOf ɛy-globin,represses

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T13381 28-33 Binding denotes binds
T13380 14-23 Regulation denotes regulates
T13293 88-97 Protein denotes ɛy-globin
T13292 62-69 Protein denotes ɛy gene
T13291 0-4 Protein denotes Sox6
R9163 T13291 T13380 themeOf Sox6,regulates
R9164 T13291 T13381 themeOf Sox6,binds
R9165 T13292 T13381 themeOf ɛy gene,binds

DLUT931

Id Subject Object Predicate Lexical cue
T13629 74-83 Negative_regulation denotes represses
T13628 28-33 Binding denotes binds
T13539 88-97 Protein denotes ɛy-globin
T13538 62-69 Protein denotes ɛy gene
T13537 0-4 Protein denotes Sox6
R9256 T13537 T13628 themeOf Sox6,binds
R9260 T13538 T13628 themeOf ɛy gene,binds
R9261 T13539 T13629 themeOf ɛy-globin,represses

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T15681 0-131 Negative_regulation denotes Sox6 directly regulates and binds to the proximal promoter of ɛy gene and represses the ɛy-globin gene in definitive erythropoiesis
T15680 0-69 Binding denotes Sox6 directly regulates and binds to the proximal promoter of ɛy gene
T15584 84-102 Protein denotes the ɛy-globin gene
T15571 62-69 Protein denotes ɛy gene
T15545 0-4 Protein denotes Sox6
T15541 34-69 Entity denotes to the proximal promoter of ɛy gene
T15634 88-97 Protein denotes ɛy-globin
T15630 88-97 Protein denotes ɛy-globin
T15605 91-97 Protein denotes globin
R10967 T15541 T15680 themeOf to the proximal promoter of ɛy gene,Sox6 directly regulates and binds to the proximal promoter of ɛy gene
R10969 T15545 T15680 themeOf Sox6,Sox6 directly regulates and binds to the proximal promoter of ɛy gene
R10970 T15545 T15681 causeOf Sox6,Sox6 directly regulates and binds to the proximal promoter of ɛy gene and represses the ɛy-globin gene in definitive erythropoiesis
R10986 T15584 T15681 themeOf the ɛy-globin gene,Sox6 directly regulates and binds to the proximal promoter of ɛy gene and represses the ɛy-globin gene in definitive erythropoiesis

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T13874 117-131 NNS denotes erythropoiesis
T13873 106-116 JJ denotes definitive
T13872 103-105 IN denotes in
T13871 98-102 NN denotes gene
T13870 88-97 JJ denotes ɛy-globin
T13869 84-87 DT denotes the
T13868 74-83 VBZ denotes represses
T13867 70-73 CC denotes and
T13866 65-69 NN denotes gene
T13865 62-64 JJ denotes ɛy
T13864 59-61 IN denotes of
T13863 50-58 NN denotes promoter
T13862 41-49 JJ denotes proximal
T13861 37-40 DT denotes the
T13860 34-36 TO denotes to
T13859 28-33 VBZ denotes binds
T13858 24-27 CC denotes and
T13857 14-23 VBZ denotes regulates
T13856 5-13 RB denotes directly
T13855 0-4 JJ denotes Sox6
R9472 T13855 T13857 nsubj Sox6,regulates
R9475 T13856 T13857 advmod directly,regulates
R9480 T13857 T13857 ROOT regulates,regulates
R9483 T13858 T13857 cc and,regulates
R9486 T13859 T13857 conj binds,regulates
R9490 T13860 T13859 prep to,binds
R9494 T13861 T13863 det the,promoter
R9498 T13862 T13863 amod proximal,promoter
R9502 T13863 T13860 pobj promoter,to
R9503 T13864 T13863 prep of,promoter
R9510 T13865 T13866 amod ɛy,gene
R9513 T13866 T13864 pobj gene,of
R9516 T13867 T13863 cc and,promoter
R9519 T13868 T13857 conj represses,regulates
R9523 T13869 T13871 det the,gene
R9528 T13870 T13871 amod ɛy-globin,gene
R9532 T13871 T13868 dobj gene,represses
R9536 T13872 T13871 prep in,gene
R9538 T13873 T13874 amod definitive,erythropoiesis
R9543 T13874 T13872 pobj erythropoiesis,in

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T11611 74-83 Negative_regulation denotes represses
T11610 50-58 Entity denotes promoter
T11609 88-102 Protein denotes ɛy-globin gene
T11608 0-4 Protein denotes Sox6
T11612 28-33 Binding denotes binds
R7683 T11608 T11612 themeOf Sox6,binds
R7684 T11609 T11611 themeOf ɛy-globin gene,represses
R7685 T11610 T11612 Site promoter,binds

testone

Id Subject Object Predicate Lexical cue
T10785 88-97 Protein denotes ɛy-globin
T10784 62-69 Protein denotes ɛy gene
T10783 0-4 Protein denotes Sox6
T10877 74-83 Negative_regulation denotes represses
T10876 50-58 Entity denotes promoter
T10875 41-49 Entity denotes proximal
T10874 28-33 Binding denotes binds
T10873 14-23 Regulation denotes regulates
R7435 T10783 T10873 causeOf Sox6,regulates
R7436 T10783 T10874 themeOf Sox6,binds
R7437 T10784 T10874 themeOf ɛy gene,binds
R7438 T10785 T10877 themeOf ɛy-globin,represses
R7481 T10874 T10873 themeOf binds,regulates
R7482 T10876 T10874 themeOf promoter,binds

test3

Id Subject Object Predicate Lexical cue
T11028 88-97 Protein denotes ɛy-globin
T11027 74-83 Negative_regulation denotes represses
T11026 62-69 Protein denotes ɛy gene
T11025 50-58 Entity denotes promoter
T11024 28-33 Binding denotes binds
T11023 14-23 Regulation denotes regulates
T11022 0-4 Protein denotes Sox6
T10930 88-97 Protein denotes ɛy-globin
T10929 62-69 Protein denotes ɛy gene
T10928 0-4 Protein denotes Sox6
R7493 T11022 T11023 themeOf Sox6,regulates
R7494 T11022 T11027 causeOf Sox6,represses
R7495 T11022 T11024 themeOf Sox6,binds
R7496 T11024 T11027 causeOf binds,represses
R7497 T11025 T11024 themeOf promoter,binds
R7498 T11028 T11027 themeOf ɛy-globin,represses