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PMC:1359074 / 248-496 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T325 241-243 VB denotes is
T324 234-240 NN denotes globin
T323 231-233 JJ denotes ɛy
T322 229-230 -COMMA- denotes ,
T321 224-229 NN denotes p100H
T320 222-223 -COMMA- denotes ,
T319 217-222 NN denotes mouse
T318 202-216 JJ denotes Sox6-deficient
T317 198-201 DT denotes the
T316 195-197 IN denotes In
T315 187-193 NN denotes muscle
T314 183-186 CC denotes and
T313 181-182 -COMMA- denotes ,
T312 172-181 NN denotes cartilage
T311 170-171 -COMMA- denotes ,
T310 164-170 NN denotes system
T309 156-163 JJ denotes nervous
T308 148-155 JJ denotes central
T307 144-147 DT denotes the
T306 141-143 IN denotes of
T305 129-140 NN denotes development
T304 125-128 DT denotes the
T303 122-124 IN denotes in
T302 117-121 NN denotes role
T301 115-116 DT denotes a
T300 109-114 VB denotes plays
T299 104-108 NN denotes Sox6
T298 99-103 IN denotes that
T297 89-98 VB denotes suggested
T296 84-88 VB denotes have
T295 76-83 NN denotes studies
T294 67-75 NNP denotes Previous
T293 62-66 NNP denotes Sry.
T292 60-61 -COMMA- denotes ,
T291 56-60 NN denotes gene
T290 44-55 VB denotes determining
T289 37-43 NN denotes testis
T288 33-36 DT denotes the
T287 30-32 IN denotes in
T286 20-29 VB denotes described
T285 14-19 RB denotes first
T284 12-13 -COMMA- denotes ,
T283 6-12 NN denotes domain
R75 T283 T284 arg1Of domain,","
R76 T283 T286 arg2Of domain,described
R77 T286 T285 arg1Of described,first
R78 T286 T287 arg1Of described,in
R79 T289 T287 arg2Of testis,in
R80 T289 T288 arg1Of testis,the
R81 T289 T290 arg1Of testis,determining
R82 T291 T290 arg2Of gene,determining
R83 T291 T296 modOf gene,have
R84 T294 T293 arg1Of Previous,Sry.
R85 T295 T294 arg1Of studies,Previous
R86 T295 T296 arg1Of studies,have
R87 T295 T297 arg1Of studies,suggested
R88 T297 T292 arg1Of suggested,","
R89 T297 T296 arg2Of suggested,have
R90 T299 T300 arg1Of Sox6,plays
R91 T300 T297 arg2Of plays,suggested
R92 T300 T298 arg1Of plays,that
R93 T300 T303 arg1Of plays,in
R94 T302 T300 arg2Of role,plays
R95 T302 T301 arg1Of role,a
R96 T305 T306 arg1Of development,of
R97 T305 T311 arg1Of development,","
R98 T310 T306 arg2Of system,of
R99 T310 T307 arg1Of system,the
R100 T310 T308 arg1Of system,central
R101 T310 T309 arg1Of system,nervous
R102 T311 T314 arg1Of ",",and
R103 T312 T311 arg2Of cartilage,","
R104 T314 T303 arg2Of and,in
R105 T314 T304 arg1Of and,the
R106 T314 T313 arg1Of and,","
R107 T315 T314 arg2Of muscle,and
R108 T319 T316 arg2Of mouse,In
R109 T319 T317 arg1Of mouse,the
R110 T319 T318 arg1Of mouse,Sox6-deficient
R111 T319 T320 arg1Of mouse,","
R112 T321 T320 arg2Of p100H,","
R113 T324 T323 arg1Of globin,ɛy
R114 T324 T325 arg1Of globin,is

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T149 62-65 Protein denotes Sry
T150 104-108 Protein denotes Sox6
T151 202-206 Protein denotes Sox6
T152 231-240 Protein denotes ɛy globin

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T475 104-108 http://www.uniprot.org/uniprot/P35712 denotes Sox6
T476 202-206 http://www.uniprot.org/uniprot/P35712 denotes Sox6

UBERON-AE

Id Subject Object Predicate Lexical cue
T86 37-43 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testis
T87 148-155 http://purl.obolibrary.org/obo/UBERON_0012131 denotes central
T88 148-170 http://purl.obolibrary.org/obo/UBERON_0001017 denotes central nervous system
T89 156-170 http://purl.obolibrary.org/obo/UBERON_0001016 denotes nervous system

GO-BP

Id Subject Object Predicate Lexical cue
T112 129-170 http://purl.obolibrary.org/obo/GO_0007417 denotes development of the central nervous system
T111 129-140 http://purl.obolibrary.org/obo/GO_0032502 denotes development
T101 234-240 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T113 129-170 http://purl.obolibrary.org/obo/GO_0021954 denotes development of the central nervous system

GO-MF

Id Subject Object Predicate Lexical cue
T166 234-240 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

sentences

Id Subject Object Predicate Lexical cue
T5 67-194 Sentence denotes Previous studies have suggested that Sox6 plays a role in the development of the central nervous system, cartilage, and muscle.

ICD10

Id Subject Object Predicate Lexical cue
T173 156-163 http://purl.bioontology.org/ontology/ICD10/R45.0 denotes nervous

simple1

Id Subject Object Predicate Lexical cue
T237 231-240 Protein denotes ɛy globin
T236 202-206 Protein denotes Sox6
T235 104-108 Protein denotes Sox6
T234 62-65 Protein denotes Sry

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T879 62-65 Protein denotes Sry
T880 104-108 Protein denotes Sox6
T881 202-206 Protein denotes Sox6
T882 231-240 Protein denotes ɛy globin
T897 207-216 Negative_regulation denotes deficient
R586 T881 T897 themeOf Sox6,deficient

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T487 62-65 Protein denotes Sry
T488 104-108 Protein denotes Sox6
T489 202-206 Protein denotes Sox6
T490 231-240 Protein denotes ɛy globin
T505 207-216 Negative_regulation denotes deficient
R447 T489 T505 themeOf Sox6,deficient

DLUT931

Id Subject Object Predicate Lexical cue
T518 62-65 Protein denotes Sry
T519 104-108 Protein denotes Sox6
T520 202-206 Protein denotes Sox6
T521 231-240 Protein denotes ɛy globin
T536 207-216 Negative_regulation denotes deficient
R463 T520 T536 themeOf Sox6,deficient

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T875 33-65 Localization denotes the testis determining gene, Sry
T846 33-65 Protein denotes the testis determining gene, Sry
T850 224-229 Entity denotes p100H
T853 231-240 Protein denotes ɛy globin
T856 104-108 Protein denotes Sox6
T864 33-65 Protein denotes the testis determining gene, Sry
R576 T846 T875 themeOf "the testis determining gene, Sry","the testis determining gene, Sry"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T650 241-243 VBZ denotes is
T649 234-240 NN denotes globin
T648 231-233 JJ denotes ɛy
T647 229-230 , denotes ,
T646 224-229 NNP denotes p100H
T645 222-223 , denotes ,
T644 217-222 NN denotes mouse
T643 202-216 JJ denotes Sox6-deficient
T642 198-201 DT denotes the
T641 195-197 IN denotes In
T640 193-194 . denotes .
T639 187-193 NN denotes muscle
T638 183-186 CC denotes and
T637 181-182 , denotes ,
T636 172-181 NN denotes cartilage
T635 170-171 , denotes ,
T634 164-170 NN denotes system
T633 156-163 JJ denotes nervous
T632 148-155 JJ denotes central
T631 144-147 DT denotes the
T630 141-143 IN denotes of
T629 129-140 NN denotes development
T628 125-128 DT denotes the
T627 122-124 IN denotes in
T626 117-121 NN denotes role
T625 115-116 DT denotes a
T624 109-114 NNS denotes plays
T623 104-108 JJ denotes Sox6
T622 99-103 IN denotes that
T621 89-98 VBN denotes suggested
T620 84-88 VBP denotes have
T619 76-83 NNS denotes studies
T618 67-75 JJ denotes Previous
T617 65-66 . denotes .
T616 62-65 NNP denotes Sry
T615 60-61 , denotes ,
T614 56-60 NN denotes gene
T613 44-55 VBG denotes determining
T612 37-43 NN denotes testis
T611 33-36 DT denotes the
T610 30-32 IN denotes in
T609 20-29 VBN denotes described
T608 14-19 JJ denotes first
T607 12-13 , denotes ,
T606 6-12 NN denotes domain
R303 T607 T606 punct ",",domain
R304 T608 T609 advmod first,described
R306 T610 T609 prep in,described
R307 T611 T614 det the,gene
R308 T612 T614 amod testis,gene
R309 T613 T614 amod determining,gene
R310 T614 T610 pobj gene,in
R311 T615 T614 punct ",",gene
R312 T616 T614 appos Sry,gene
R314 T618 T619 amod Previous,studies
R315 T619 T621 nsubj studies,suggested
R316 T620 T621 aux have,suggested
R317 T621 T621 ROOT suggested,suggested
R318 T622 T624 mark that,plays
R319 T623 T624 nsubj Sox6,plays
R320 T624 T621 ccomp plays,suggested
R321 T625 T626 det a,role
R322 T626 T624 dobj role,plays
R323 T627 T626 prep in,role
R324 T628 T629 det the,development
R325 T629 T627 pobj development,in
R326 T630 T629 prep of,development
R327 T631 T634 det the,system
R328 T632 T634 amod central,system
R329 T633 T634 amod nervous,system
R330 T634 T630 pobj system,of
R331 T635 T634 punct ",",system
R332 T636 T634 conj cartilage,system
R333 T637 T636 punct ",",cartilage
R334 T638 T636 cc and,cartilage
R335 T639 T636 conj muscle,cartilage
R336 T640 T621 punct .,suggested
R338 T642 T644 det the,mouse
R339 T643 T644 amod Sox6-deficient,mouse
R340 T644 T641 pobj mouse,In
R344 T648 T649 amod ɛy,globin

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T212 207-216 Negative_regulation denotes deficient
T211 231-240 Protein denotes ɛy globin
T210 224-229 Protein denotes p100H
T209 202-206 Protein denotes Sox6
T208 104-108 Protein denotes Sox6
T205 6-12 Entity denotes domain
T204 62-65 Protein denotes Sry
R30 T204 T205 partOf Sry,domain
R33 T209 T212 themeOf Sox6,deficient

testone

Id Subject Object Predicate Lexical cue
T23 62-65 Protein denotes Sry
T24 104-108 Protein denotes Sox6
T25 202-206 Protein denotes Sox6
T26 231-240 Protein denotes ɛy globin
T40 207-216 Negative_regulation denotes deficient
R2 T25 T40 themeOf Sox6,deficient

test3

Id Subject Object Predicate Lexical cue
T48 62-65 Protein denotes Sry
T49 104-108 Protein denotes Sox6
T50 202-206 Protein denotes Sox6
T51 231-240 Protein denotes ɛy globin
T68 62-65 Protein denotes Sry
T69 104-108 Protein denotes Sox6
T70 202-206 Protein denotes Sox6
T71 231-240 Protein denotes ɛy globin