PMC:1359074 / 23262-23467
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10029 | 190-204 | NN | denotes | erythropoiesis |
T10028 | 179-189 | JJ | denotes | definitive |
T10027 | 176-178 | IN | denotes | in |
T10026 | 166-175 | NN | denotes | functions |
T10025 | 161-165 | NN | denotes | Sox6 |
T10024 | 156-160 | IN | denotes | that |
T10023 | 144-155 | VB | denotes | demonstrate |
T10022 | 142-143 | -COMMA- | denotes | , |
T10021 | 141-142 | -RRB- | denotes | ) |
T10020 | 140-141 | CD | denotes | 5 |
T10019 | 133-139 | NN | denotes | Figure |
T10018 | 132-133 | -LRB- | denotes | ( |
T10017 | 127-131 | NN | denotes | mice |
T10016 | 120-126 | JJ | denotes | mutant |
T10015 | 114-119 | NN | denotes | p100H |
T10014 | 105-113 | JJ | denotes | 14.5-dpc |
T10013 | 102-104 | IN | denotes | of |
T10012 | 96-101 | NN | denotes | cells |
T10011 | 90-95 | NN | denotes | liver |
T10010 | 86-89 | DT | denotes | the |
T10009 | 83-85 | IN | denotes | in |
T10008 | 73-82 | VB | denotes | expressed |
T10007 | 66-72 | RB | denotes | highly |
T10006 | 63-65 | VB | denotes | is |
T10005 | 56-62 | NN | denotes | globin |
T10004 | 53-55 | JJ | denotes | ɛy |
T10003 | 48-52 | IN | denotes | that |
T10002 | 36-47 | NN | denotes | observation |
T10001 | 32-35 | DT | denotes | the |
T10000 | 27-31 | IN | denotes | with |
T9999 | 18-26 | RB | denotes | together |
T9998 | 12-17 | VB | denotes | taken |
T9997 | 10-11 | -COMMA- | denotes | , |
T9996 | 6-10 | NN | denotes | data |
T9995 | 0-5 | DT | denotes | These |
R6916 | T9996 | T9995 | arg1Of | data,These |
R6917 | T9996 | T9998 | arg2Of | data,taken |
R6918 | T9996 | T10023 | arg1Of | data,demonstrate |
R6919 | T9998 | T9997 | arg1Of | taken,"," |
R6920 | T9998 | T9999 | arg1Of | taken,together |
R6921 | T9998 | T10000 | arg1Of | taken,with |
R6922 | T10002 | T10000 | arg2Of | observation,with |
R6923 | T10002 | T10001 | arg1Of | observation,the |
R6924 | T10005 | T10004 | arg1Of | globin,ɛy |
R6925 | T10005 | T10006 | arg1Of | globin,is |
R6926 | T10005 | T10008 | arg2Of | globin,expressed |
R6927 | T10008 | T10002 | arg2Of | expressed,observation |
R6928 | T10008 | T10003 | arg1Of | expressed,that |
R6929 | T10008 | T10006 | arg2Of | expressed,is |
R6930 | T10008 | T10007 | arg1Of | expressed,highly |
R6931 | T10008 | T10009 | arg1Of | expressed,in |
R6932 | T10012 | T10009 | arg2Of | cells,in |
R6933 | T10012 | T10010 | arg1Of | cells,the |
R6934 | T10012 | T10011 | arg1Of | cells,liver |
R6935 | T10012 | T10013 | arg1Of | cells,of |
R6936 | T10017 | T10013 | arg2Of | mice,of |
R6937 | T10017 | T10014 | arg1Of | mice,14.5-dpc |
R6938 | T10017 | T10015 | arg1Of | mice,p100H |
R6939 | T10017 | T10016 | arg1Of | mice,mutant |
R6940 | T10017 | T10018 | arg1Of | mice,( |
R6941 | T10019 | T10018 | arg2Of | Figure,( |
R6942 | T10019 | T10020 | arg1Of | Figure,5 |
R6943 | T10021 | T10018 | arg3Of | ),( |
R6944 | T10023 | T10022 | arg1Of | demonstrate,"," |
R6945 | T10023 | T10027 | arg1Of | demonstrate,in |
R6946 | T10026 | T10023 | arg2Of | functions,demonstrate |
R6947 | T10026 | T10024 | arg1Of | functions,that |
R6948 | T10026 | T10025 | arg1Of | functions,Sox6 |
R6949 | T10029 | T10027 | arg2Of | erythropoiesis,in |
R6950 | T10029 | T10028 | arg1Of | erythropoiesis,definitive |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9829 | 161-165 | Protein | denotes | Sox6 |
T9828 | 53-62 | Protein | denotes | ɛy globin |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10037 | 161-165 | http://www.uniprot.org/uniprot/P35712 | denotes | Sox6 |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9775 | 90-95 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9799 | 56-62 | http://purl.obolibrary.org/obo/GO_0005344 | denotes | globin |
T9797 | 190-204 | http://purl.obolibrary.org/obo/GO_0030218 | denotes | erythropoiesis |
T9792 | 179-204 | http://purl.obolibrary.org/obo/GO_0060318 | denotes | definitive erythropoiesis |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9831 | 56-62 | http://purl.obolibrary.org/obo/GO_0005344 | denotes | globin |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9833 | 96-101 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9788 | 0-205 | Sentence | denotes | These data, taken together with the observation that ɛy globin is highly expressed in the liver cells of 14.5-dpc p100H mutant mice (Figure 5), demonstrate that Sox6 functions in definitive erythropoiesis. |
T173 | 0-205 | Sentence | denotes | These data, taken together with the observation that ɛy globin is highly expressed in the liver cells of 14.5-dpc p100H mutant mice (Figure 5), demonstrate that Sox6 functions in definitive erythropoiesis. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9861 | 161-165 | Protein | denotes | Sox6 |
T9860 | 53-62 | Protein | denotes | ɛy globin |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10321 | 73-82 | Gene_expression | denotes | expressed |
T10314 | 53-62 | Protein | denotes | ɛy globin |
T10313 | 161-165 | Protein | denotes | Sox6 |
R7158 | T10314 | T10321 | themeOf | ɛy globin,expressed |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10053 | 73-82 | Gene_expression | denotes | expressed |
T10047 | 53-62 | Protein | denotes | ɛy globin |
T10046 | 161-165 | Protein | denotes | Sox6 |
R6956 | T10047 | T10053 | themeOf | ɛy globin,expressed |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10079 | 73-82 | Gene_expression | denotes | expressed |
T10073 | 53-62 | Protein | denotes | ɛy globin |
T10072 | 161-165 | Protein | denotes | Sox6 |
R6962 | T10073 | T10079 | themeOf | ɛy globin,expressed |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10299 | 105-142 | Protein | denotes | 14.5-dpc p100H mutant mice (Figure 5) |
T10295 | 48-62 | Protein | denotes | that ɛy globin |
T10294 | 161-165 | Protein | denotes | Sox6 |
T10285 | 86-142 | Entity | denotes | the liver cells of 14.5-dpc p100H mutant mice (Figure 5) |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10267 | 204-205 | . | denotes | . |
T10266 | 190-204 | NNS | denotes | erythropoiesis |
T10265 | 179-189 | JJ | denotes | definitive |
T10264 | 176-178 | IN | denotes | in |
T10263 | 166-175 | NNS | denotes | functions |
T10262 | 161-165 | JJ | denotes | Sox6 |
T10261 | 156-160 | IN | denotes | that |
T10260 | 144-155 | VBP | denotes | demonstrate |
T10259 | 142-143 | , | denotes | , |
T10258 | 141-142 | -RRB- | denotes | ) |
T10257 | 140-141 | CD | denotes | 5 |
T10256 | 133-139 | NN | denotes | Figure |
T10255 | 132-133 | -LRB- | denotes | ( |
T10254 | 127-131 | NNS | denotes | mice |
T10253 | 120-126 | JJ | denotes | mutant |
T10252 | 114-119 | JJ | denotes | p100H |
T10251 | 105-113 | JJ | denotes | 14.5-dpc |
T10250 | 102-104 | IN | denotes | of |
T10249 | 96-101 | NNS | denotes | cells |
T10248 | 90-95 | NN | denotes | liver |
T10247 | 86-89 | DT | denotes | the |
T10246 | 83-85 | IN | denotes | in |
T10245 | 73-82 | VBN | denotes | expressed |
T10244 | 66-72 | RB | denotes | highly |
T10243 | 63-65 | VBZ | denotes | is |
T10242 | 56-62 | NN | denotes | globin |
T10241 | 53-55 | JJ | denotes | ɛy |
T10240 | 48-52 | IN | denotes | that |
T10239 | 36-47 | NN | denotes | observation |
T10238 | 32-35 | DT | denotes | the |
T10237 | 27-31 | IN | denotes | with |
T10236 | 18-26 | RB | denotes | together |
T10235 | 12-17 | VBN | denotes | taken |
T10234 | 10-11 | , | denotes | , |
T10233 | 6-10 | NNS | denotes | data |
T10232 | 0-5 | DT | denotes | These |
R7107 | T10232 | T10233 | det | These,data |
R7108 | T10233 | T10260 | nsubj | data,demonstrate |
R7109 | T10234 | T10233 | punct | ",",data |
R7110 | T10235 | T10233 | acl | taken,data |
R7111 | T10236 | T10235 | advmod | together,taken |
R7112 | T10237 | T10235 | prep | with,taken |
R7113 | T10238 | T10239 | det | the,observation |
R7114 | T10239 | T10237 | pobj | observation,with |
R7115 | T10240 | T10245 | mark | that,expressed |
R7116 | T10241 | T10242 | amod | ɛy,globin |
R7117 | T10242 | T10245 | nsubjpass | globin,expressed |
R7118 | T10243 | T10245 | auxpass | is,expressed |
R7119 | T10244 | T10245 | advmod | highly,expressed |
R7120 | T10245 | T10239 | acl | expressed,observation |
R7121 | T10246 | T10245 | prep | in,expressed |
R7122 | T10247 | T10249 | det | the,cells |
R7123 | T10248 | T10249 | compound | liver,cells |
R7124 | T10249 | T10246 | pobj | cells,in |
R7125 | T10250 | T10249 | prep | of,cells |
R7126 | T10251 | T10254 | amod | 14.5-dpc,mice |
R7127 | T10252 | T10254 | amod | p100H,mice |
R7128 | T10253 | T10254 | amod | mutant,mice |
R7129 | T10254 | T10250 | pobj | mice,of |
R7130 | T10255 | T10256 | punct | (,Figure |
R7131 | T10256 | T10249 | appos | Figure,cells |
R7132 | T10257 | T10256 | nummod | 5,Figure |
R7133 | T10258 | T10256 | punct | ),Figure |
R7134 | T10259 | T10260 | punct | ",",demonstrate |
R7135 | T10260 | T10260 | ROOT | demonstrate,demonstrate |
R7136 | T10261 | T10263 | mark | that,functions |
R7137 | T10262 | T10263 | amod | Sox6,functions |
R7138 | T10263 | T10260 | ccomp | functions,demonstrate |
R7139 | T10264 | T10263 | prep | in,functions |
R7140 | T10265 | T10266 | amod | definitive,erythropoiesis |
R7141 | T10266 | T10264 | pobj | erythropoiesis,in |
R7142 | T10267 | T10260 | punct | .,demonstrate |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9851 | 73-82 | Gene_expression | denotes | expressed |
T9850 | 161-165 | Protein | denotes | Sox6 |
T9849 | 53-62 | Protein | denotes | ɛy globin |
R6780 | T9849 | T9851 | themeOf | ɛy globin,expressed |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9750 | 73-82 | Gene_expression | denotes | expressed |
T9746 | 161-165 | Protein | denotes | Sox6 |
T9745 | 53-62 | Protein | denotes | ɛy globin |
R6763 | T9745 | T9750 | themeOf | ɛy globin,expressed |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9771 | 161-165 | Protein | denotes | Sox6 |
T9770 | 53-62 | Protein | denotes | ɛy globin |
T9760 | 161-165 | Protein | denotes | Sox6 |
T9759 | 53-62 | Protein | denotes | ɛy globin |