PMC:1359074 / 22994-23143
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9977 | 147-148 | -RRB- | denotes | ) |
T9976 | 145-147 | NN | denotes | 6B |
T9975 | 138-144 | NN | denotes | Figure |
T9974 | 137-138 | -LRB- | denotes | ( |
T9973 | 133-136 | NN | denotes | dpc |
T9972 | 129-132 | CD | denotes | 7.5 |
T9971 | 126-128 | IN | denotes | at |
T9970 | 118-125 | NN | denotes | islands |
T9969 | 112-117 | NN | denotes | blood |
T9968 | 108-111 | NN | denotes | sac |
T9967 | 103-107 | NN | denotes | yolk |
T9966 | 100-102 | IN | denotes | in |
T9965 | 96-99 | RB | denotes | not |
T9964 | 92-95 | CC | denotes | but |
T9963 | 90-91 | -COMMA- | denotes | , |
T9962 | 85-90 | NN | denotes | liver |
T9961 | 76-84 | NN | denotes | 12.5-dpc |
T9960 | 73-75 | IN | denotes | in |
T9959 | 61-72 | VB | denotes | transcribed |
T9958 | 54-60 | RB | denotes | highly |
T9957 | 51-53 | VB | denotes | is |
T9956 | 46-50 | NN | denotes | Sox6 |
T9955 | 41-45 | IN | denotes | that |
T9954 | 35-40 | VB | denotes | shows |
T9953 | 21-34 | NN | denotes | hybridization |
T9952 | 16-20 | FW | denotes | situ |
T9951 | 13-15 | FW | denotes | in |
T9950 | 11-12 | -COMMA- | denotes | , |
T9949 | 0-11 | RB | denotes | Furthermore |
R6867 | T9952 | T9951 | arg1Of | situ,in |
R6868 | T9953 | T9952 | arg1Of | hybridization,situ |
R6869 | T9953 | T9954 | arg1Of | hybridization,shows |
R6870 | T9954 | T9949 | arg1Of | shows,Furthermore |
R6871 | T9954 | T9950 | arg1Of | shows,"," |
R6872 | T9956 | T9957 | arg1Of | Sox6,is |
R6873 | T9956 | T9959 | arg2Of | Sox6,transcribed |
R6874 | T9959 | T9954 | arg2Of | transcribed,shows |
R6875 | T9959 | T9955 | arg1Of | transcribed,that |
R6876 | T9959 | T9957 | arg2Of | transcribed,is |
R6877 | T9959 | T9958 | arg1Of | transcribed,highly |
R6878 | T9959 | T9960 | arg1Of | transcribed,in |
R6879 | T9959 | T9966 | arg1Of | transcribed,in |
R6880 | T9960 | T9964 | arg1Of | in,but |
R6881 | T9962 | T9960 | arg2Of | liver,in |
R6882 | T9962 | T9961 | arg1Of | liver,12.5-dpc |
R6883 | T9964 | T9963 | arg1Of | but,"," |
R6884 | T9966 | T9964 | arg2Of | in,but |
R6885 | T9966 | T9965 | arg1Of | in,not |
R6886 | T9970 | T9966 | arg2Of | islands,in |
R6887 | T9970 | T9967 | arg1Of | islands,yolk |
R6888 | T9970 | T9968 | arg1Of | islands,sac |
R6889 | T9970 | T9969 | arg1Of | islands,blood |
R6890 | T9970 | T9971 | arg1Of | islands,at |
R6891 | T9973 | T9971 | arg2Of | dpc,at |
R6892 | T9973 | T9972 | arg1Of | dpc,7.5 |
R6893 | T9973 | T9974 | arg1Of | dpc,( |
R6894 | T9976 | T9974 | arg2Of | 6B,( |
R6895 | T9976 | T9975 | arg1Of | 6B,Figure |
R6896 | T9977 | T9974 | arg3Of | ),( |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9826 | 46-50 | Protein | denotes | Sox6 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10035 | 46-50 | http://www.uniprot.org/uniprot/P35712 | denotes | Sox6 |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9781 | 112-125 | http://purl.obolibrary.org/obo/UBERON_0003061 | denotes | blood islands |
T9780 | 112-117 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T9779 | 108-111 | http://purl.obolibrary.org/obo/UBERON_0009856 | denotes | sac |
T9778 | 103-125 | http://purl.obolibrary.org/obo/UBERON_0011919 | denotes | yolk sac blood islands |
T9777 | 103-111 | http://purl.obolibrary.org/obo/UBERON_0001040 | denotes | yolk sac |
T9776 | 103-107 | http://purl.obolibrary.org/obo/UBERON_2000084 | denotes | yolk |
T9774 | 85-90 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9834 | 103-107 | http://purl.obolibrary.org/obo/GO_0060417 | denotes | yolk |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9786 | 0-149 | Sentence | denotes | Furthermore, in situ hybridization shows that Sox6 is highly transcribed in 12.5-dpc liver, but not in yolk sac blood islands at 7.5 dpc (Figure 6B). |
T171 | 0-149 | Sentence | denotes | Furthermore, in situ hybridization shows that Sox6 is highly transcribed in 12.5-dpc liver, but not in yolk sac blood islands at 7.5 dpc (Figure 6B). |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9858 | 46-50 | Protein | denotes | Sox6 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10319 | 61-72 | Transcription | denotes | transcribed |
T10311 | 46-50 | Protein | denotes | Sox6 |
R7156 | T10311 | T10319 | themeOf | Sox6,transcribed |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10044 | 46-50 | Protein | denotes | Sox6 |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10070 | 46-50 | Protein | denotes | Sox6 |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10303 | 13-148 | Transcription | denotes | in situ hybridization shows that Sox6 is highly transcribed in 12.5-dpc liver, but not in yolk sac blood islands at 7.5 dpc (Figure 6B) |
T10296 | 108-111 | Protein | denotes | sac |
T10293 | 129-148 | Entity | denotes | 7.5 dpc (Figure 6B) |
T10292 | 46-50 | Protein | denotes | Sox6 |
T10290 | 103-107 | Entity | denotes | yolk |
R7150 | T10292 | T10303 | themeOf | Sox6,"in situ hybridization shows that Sox6 is highly transcribed in 12.5-dpc liver, but not in yolk sac blood islands at 7.5 dpc (Figure 6B)" |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10213 | 148-149 | . | denotes | . |
T10212 | 147-148 | -RRB- | denotes | ) |
T10211 | 145-147 | NN | denotes | 6B |
T10210 | 138-144 | NN | denotes | Figure |
T10209 | 137-138 | -LRB- | denotes | ( |
T10208 | 133-136 | NN | denotes | dpc |
T10207 | 129-132 | CD | denotes | 7.5 |
T10206 | 126-128 | IN | denotes | at |
T10205 | 118-125 | NNS | denotes | islands |
T10204 | 112-117 | NN | denotes | blood |
T10203 | 108-111 | NN | denotes | sac |
T10202 | 103-107 | NN | denotes | yolk |
T10201 | 100-102 | IN | denotes | in |
T10200 | 96-99 | RB | denotes | not |
T10199 | 92-95 | CC | denotes | but |
T10198 | 90-91 | , | denotes | , |
T10197 | 85-90 | NN | denotes | liver |
T10196 | 76-84 | JJ | denotes | 12.5-dpc |
T10195 | 73-75 | IN | denotes | in |
T10194 | 61-72 | VBN | denotes | transcribed |
T10193 | 54-60 | RB | denotes | highly |
T10192 | 51-53 | VBZ | denotes | is |
T10191 | 46-50 | NNP | denotes | Sox6 |
T10190 | 41-45 | IN | denotes | that |
T10189 | 35-40 | VBZ | denotes | shows |
T10188 | 21-34 | NN | denotes | hybridization |
T10187 | 16-20 | NN | denotes | situ |
T10186 | 13-15 | IN | denotes | in |
T10185 | 11-12 | , | denotes | , |
T10184 | 0-11 | RB | denotes | Furthermore |
R7059 | T10184 | T10189 | advmod | Furthermore,shows |
R7060 | T10185 | T10189 | punct | ",",shows |
R7061 | T10186 | T10189 | prep | in,shows |
R7062 | T10187 | T10188 | compound | situ,hybridization |
R7063 | T10188 | T10189 | compound | hybridization,shows |
R7064 | T10189 | T10189 | ROOT | shows,shows |
R7065 | T10190 | T10194 | mark | that,transcribed |
R7066 | T10191 | T10194 | nsubjpass | Sox6,transcribed |
R7067 | T10192 | T10194 | auxpass | is,transcribed |
R7068 | T10193 | T10194 | advmod | highly,transcribed |
R7069 | T10194 | T10189 | ccomp | transcribed,shows |
R7070 | T10195 | T10194 | prep | in,transcribed |
R7071 | T10196 | T10197 | amod | 12.5-dpc,liver |
R7072 | T10197 | T10195 | pobj | liver,in |
R7073 | T10198 | T10194 | punct | ",",transcribed |
R7074 | T10199 | T10194 | cc | but,transcribed |
R7075 | T10200 | T10201 | neg | not,in |
R7076 | T10201 | T10206 | prep | in,at |
R7077 | T10202 | T10203 | compound | yolk,sac |
R7078 | T10203 | T10205 | compound | sac,islands |
R7079 | T10204 | T10205 | compound | blood,islands |
R7080 | T10205 | T10201 | pobj | islands,in |
R7081 | T10206 | T10194 | conj | at,transcribed |
R7082 | T10207 | T10208 | nummod | 7.5,dpc |
R7083 | T10208 | T10206 | pobj | dpc,at |
R7084 | T10209 | T10211 | punct | (,6B |
R7085 | T10210 | T10211 | compound | Figure,6B |
R7086 | T10211 | T10208 | appos | 6B,dpc |
R7087 | T10212 | T10211 | punct | ),6B |
R7088 | T10213 | T10189 | punct | .,shows |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9846 | 61-72 | Transcription | denotes | transcribed |
T9845 | 46-50 | Protein | denotes | Sox6 |
R6778 | T9845 | T9846 | themeOf | Sox6,transcribed |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9743 | 46-50 | Protein | denotes | Sox6 |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9767 | 46-50 | Protein | denotes | Sox6 |
T9757 | 46-50 | Protein | denotes | Sox6 |