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PMC:1359074 / 21213-21330 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T9237 111-116 NN denotes fetus
T9236 107-110 DT denotes the
T9235 104-106 IN denotes in
T9234 89-103 NN denotes erythropoiesis
T9233 78-88 JJ denotes definitive
T9232 75-77 IN denotes of
T9231 70-74 NN denotes site
T9230 66-69 DT denotes the
T9229 64-65 -COMMA- denotes ,
T9228 59-64 NN denotes liver
T9227 50-58 NN denotes 14.5-dpc
T9226 47-49 NN denotes WT
T9225 43-46 DT denotes the
T9224 40-42 IN denotes in
T9223 30-39 VB denotes expressed
T9222 26-29 RB denotes not
T9221 23-25 VB denotes is
T9220 16-22 NN denotes globin
T9219 13-15 JJ denotes ɛy
T9218 11-12 -COMMA- denotes ,
T9217 3-11 VB denotes expected
T9216 0-2 IN denotes As
R6362 T9217 T9216 arg2Of expected,As
R6363 T9220 T9219 arg1Of globin,ɛy
R6364 T9220 T9221 arg1Of globin,is
R6365 T9220 T9223 arg2Of globin,expressed
R6366 T9223 T9216 arg1Of expressed,As
R6367 T9223 T9218 arg1Of expressed,","
R6368 T9223 T9221 arg2Of expressed,is
R6369 T9223 T9222 arg1Of expressed,not
R6370 T9223 T9224 arg1Of expressed,in
R6371 T9228 T9224 arg2Of liver,in
R6372 T9228 T9225 arg1Of liver,the
R6373 T9228 T9226 arg1Of liver,WT
R6374 T9228 T9227 arg1Of liver,14.5-dpc
R6375 T9228 T9229 arg1Of liver,","
R6376 T9231 T9229 arg2Of site,","
R6377 T9231 T9230 arg1Of site,the
R6378 T9231 T9232 arg1Of site,of
R6379 T9231 T9235 arg1Of site,in
R6380 T9234 T9232 arg2Of erythropoiesis,of
R6381 T9234 T9233 arg1Of erythropoiesis,definitive
R6382 T9237 T9235 arg2Of fetus,in
R6383 T9237 T9236 arg1Of fetus,the

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T9079 13-22 Protein denotes ɛy globin

UBERON-AE

Id Subject Object Predicate Lexical cue
T9021 59-64 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver

GO-BP

Id Subject Object Predicate Lexical cue
T9039 89-103 http://purl.obolibrary.org/obo/GO_0030218 denotes erythropoiesis
T9038 78-103 http://purl.obolibrary.org/obo/GO_0060318 denotes definitive erythropoiesis
T9036 16-22 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

GO-MF

Id Subject Object Predicate Lexical cue
T9091 16-22 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

sentences

Id Subject Object Predicate Lexical cue
T9027 0-117 Sentence denotes As expected, ɛy globin is not expressed in the WT 14.5-dpc liver, the site of definitive erythropoiesis in the fetus.
T154 0-117 Sentence denotes As expected, ɛy globin is not expressed in the WT 14.5-dpc liver, the site of definitive erythropoiesis in the fetus.

simple1

Id Subject Object Predicate Lexical cue
T9122 13-22 Protein denotes ɛy globin

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T9707 30-39 Gene_expression denotes expressed
T9693 13-22 Protein denotes ɛy globin
R6751 T9693 T9707 themeOf ɛy globin,expressed

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T9347 30-39 Gene_expression denotes expressed
T9334 13-22 Protein denotes ɛy globin
R6477 T9334 T9347 themeOf ɛy globin,expressed

DLUT931

Id Subject Object Predicate Lexical cue
T9392 30-39 Gene_expression denotes expressed
T9374 13-22 Protein denotes ɛy globin
R6494 T9374 T9392 themeOf ɛy globin,expressed

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue Negation
T9684 13-65 Gene_expression denotes ɛy globin is not expressed in the WT 14.5-dpc liver, true
T9658 13-22 Protein denotes ɛy globin
R6737 T9658 T9684 themeOf ɛy globin,"ɛy globin is not expressed in the WT 14.5-dpc liver,"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T9533 116-117 . denotes .
T9532 111-116 NN denotes fetus
T9531 107-110 DT denotes the
T9530 104-106 IN denotes in
T9529 89-103 NNS denotes erythropoiesis
T9528 78-88 JJ denotes definitive
T9527 75-77 IN denotes of
T9526 70-74 NN denotes site
T9525 66-69 DT denotes the
T9524 64-65 , denotes ,
T9523 59-64 NN denotes liver
T9522 50-58 JJ denotes 14.5-dpc
T9521 47-49 NNP denotes WT
T9520 43-46 DT denotes the
T9519 40-42 IN denotes in
T9518 30-39 VBN denotes expressed
T9517 26-29 RB denotes not
T9516 23-25 VBZ denotes is
T9515 16-22 NN denotes globin
T9514 13-15 JJ denotes ɛy
T9513 11-12 , denotes ,
T9512 3-11 VBN denotes expected
T9511 0-2 IN denotes As
R6608 T9511 T9512 mark As,expected
R6609 T9512 T9518 advcl expected,expressed
R6610 T9513 T9518 punct ",",expressed
R6611 T9514 T9515 amod ɛy,globin
R6612 T9515 T9518 nsubjpass globin,expressed
R6613 T9516 T9518 auxpass is,expressed
R6614 T9517 T9518 neg not,expressed
R6615 T9518 T9518 ROOT expressed,expressed
R6616 T9519 T9518 prep in,expressed
R6617 T9520 T9523 det the,liver
R6618 T9521 T9523 nmod WT,liver
R6619 T9522 T9523 amod 14.5-dpc,liver
R6620 T9523 T9519 pobj liver,in
R6621 T9524 T9523 punct ",",liver
R6622 T9525 T9526 det the,site
R6623 T9526 T9523 appos site,liver
R6624 T9527 T9526 prep of,site
R6625 T9528 T9529 amod definitive,erythropoiesis
R6626 T9529 T9527 pobj erythropoiesis,of
R6627 T9530 T9526 prep in,site
R6628 T9531 T9532 det the,fetus
R6629 T9532 T9530 pobj fetus,in
R6630 T9533 T9518 punct .,expressed

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T9108 30-39 Gene_expression denotes expressed
T9107 13-22 Protein denotes ɛy globin
R6269 T9107 T9108 themeOf ɛy globin,expressed

testone

Id Subject Object Predicate Lexical cue
T8979 30-39 Gene_expression denotes expressed
T8968 13-22 Protein denotes ɛy globin
R6230 T8968 T8979 themeOf ɛy globin,expressed

test3

Id Subject Object Predicate Lexical cue
T9011 30-39 Gene_expression denotes expressed
T9010 13-22 Protein denotes ɛy globin
T8990 13-22 Protein denotes ɛy globin
R6239 T9010 T9011 themeOf ɛy globin,expressed