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PMC:1359074 / 20660-20805 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T9150 140-145 NN denotes Cells
T9149 130-139 JJ denotes Erythroid
T9148 119-129 JJ denotes Definitive
T9147 116-118 IN denotes in
T9146 106-115 NN denotes Mechanism
T9145 88-105 JJ denotes ɛy-Gene–Silencing
T9144 84-87 DT denotes the
T9143 81-83 IN denotes in
T9142 74-80 NN denotes Defect
T9141 72-73 DT denotes a
T9140 69-71 TO denotes to
T9139 65-68 JJ denotes Due
T9138 62-64 VB denotes Is
T9137 57-61 NN denotes Mice
T9136 42-56 JJ denotes Sox6-Deficient
T9135 39-41 IN denotes in
T9134 32-38 NN denotes Globin
T9133 29-31 JJ denotes ɛy
T9132 26-28 IN denotes of
T9131 15-25 NN denotes Expression
T9130 4-14 JJ denotes Persistent
T9129 0-3 DT denotes The
R6272 T9131 T9129 arg1Of Expression,The
R6273 T9131 T9130 arg1Of Expression,Persistent
R6274 T9131 T9132 arg1Of Expression,of
R6275 T9131 T9135 arg1Of Expression,in
R6276 T9131 T9138 arg1Of Expression,Is
R6277 T9131 T9140 arg1Of Expression,to
R6278 T9134 T9132 arg2Of Globin,of
R6279 T9134 T9133 arg1Of Globin,ɛy
R6280 T9137 T9135 arg2Of Mice,in
R6281 T9137 T9136 arg1Of Mice,Sox6-Deficient
R6282 T9140 T9138 arg2Of to,Is
R6283 T9140 T9139 arg1Of to,Due
R6284 T9142 T9140 arg2Of Defect,to
R6285 T9142 T9141 arg1Of Defect,a
R6286 T9142 T9143 arg1Of Defect,in
R6287 T9146 T9143 arg2Of Mechanism,in
R6288 T9146 T9144 arg1Of Mechanism,the
R6289 T9146 T9145 arg1Of Mechanism,ɛy-Gene–Silencing
R6290 T9146 T9147 arg1Of Mechanism,in
R6291 T9150 T9147 arg2Of Cells,in
R6292 T9150 T9148 arg1Of Cells,Definitive
R6293 T9150 T9149 arg1Of Cells,Erythroid

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T9074 88-90 Protein denotes ɛy
T9073 42-46 Protein denotes Sox6
T9072 29-38 Protein denotes ɛy Globin

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T9325 42-46 http://www.uniprot.org/uniprot/P35712 denotes Sox6

GO-BP

Id Subject Object Predicate Lexical cue
T9031 32-38 http://purl.obolibrary.org/obo/GO_0005344 denotes Globin

GO-MF

Id Subject Object Predicate Lexical cue
T9086 32-38 http://purl.obolibrary.org/obo/GO_0005344 denotes Globin

sentences

Id Subject Object Predicate Lexical cue
T9024 0-145 Sentence denotes The Persistent Expression of ɛy Globin in Sox6-Deficient Mice Is Due to a Defect in the ɛy-Gene–Silencing Mechanism in Definitive Erythroid Cells
T151 0-145 Sentence denotes The Persistent Expression of ɛy Globin in Sox6-Deficient Mice Is Due to a Defect in the ɛy-Gene–Silencing Mechanism in Definitive Erythroid Cells

simple1

Id Subject Object Predicate Lexical cue
T9117 88-90 Protein denotes ɛy
T9116 42-46 Protein denotes Sox6
T9115 29-38 Protein denotes ɛy Globin

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T9701 47-56 Negative_regulation denotes Deficient
T9700 15-25 Gene_expression denotes Expression
T9688 88-90 Protein denotes ɛy
T9687 42-46 Protein denotes Sox6
T9686 29-38 Protein denotes ɛy Globin
R6745 T9686 T9700 themeOf ɛy Globin,Expression
R6746 T9687 T9701 themeOf Sox6,Deficient

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T9329 88-90 Protein denotes ɛy
T9328 42-46 Protein denotes Sox6
T9327 29-38 Protein denotes ɛy Globin
T9342 47-56 Negative_regulation denotes Deficient
T9341 15-25 Gene_expression denotes Expression
R6472 T9327 T9341 themeOf ɛy Globin,Expression
R6473 T9328 T9342 themeOf Sox6,Deficient

DLUT931

Id Subject Object Predicate Lexical cue
T9384 91-105 Gene_expression denotes Gene–Silencing
T9383 65-68 Positive_regulation denotes Due
T9382 47-56 Negative_regulation denotes Deficient
T9381 15-25 Gene_expression denotes Expression
T9369 88-90 Protein denotes ɛy
T9368 42-46 Protein denotes Sox6
T9367 29-38 Protein denotes ɛy Globin
R6486 T9367 T9381 themeOf ɛy Globin,Expression
R6487 T9368 T9382 themeOf Sox6,Deficient
R6488 T9369 T9384 themeOf ɛy,Gene–Silencing
R6502 T9381 T9383 themeOf Expression,Due

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T9681 0-56 Gene_expression denotes The Persistent Expression of ɛy Globin in Sox6-Deficient
T9675 119-145 Entity denotes Definitive Erythroid Cells
T9673 26-38 Protein denotes of ɛy Globin
T9662 57-61 Protein denotes Mice
T9652 42-56 Protein denotes Sox6-Deficient
R6744 T9673 T9681 themeOf of ɛy Globin,The Persistent Expression of ɛy Globin in Sox6-Deficient

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T9443 140-145 NNP denotes Cells
T9442 130-139 NNP denotes Erythroid
T9441 119-129 NNP denotes Definitive
T9440 116-118 IN denotes in
T9439 106-115 NNP denotes Mechanism
T9438 96-105 VBG denotes Silencing
T9437 88-95 JJ denotes ɛy-Gene
T9436 84-87 DT denotes the
T9435 81-83 IN denotes in
T9434 74-80 NN denotes Defect
T9433 72-73 DT denotes a
T9432 69-71 TO denotes to
T9431 65-68 JJ denotes Due
T9430 62-64 VBZ denotes Is
T9429 57-61 NNP denotes Mice
T9428 42-56 NNP denotes Sox6-Deficient
T9427 39-41 IN denotes in
T9426 32-38 NNP denotes Globin
T9425 29-31 NNP denotes ɛy
T9424 26-28 IN denotes of
T9423 15-25 NNP denotes Expression
T9422 4-14 NNP denotes Persistent
T9421 0-3 DT denotes The
R6518 T9421 T9423 det The,Expression
R6519 T9422 T9423 compound Persistent,Expression
R6520 T9423 T9423 ROOT Expression,Expression
R6521 T9424 T9423 prep of,Expression
R6522 T9425 T9426 compound ɛy,Globin
R6523 T9426 T9424 pobj Globin,of
R6524 T9427 T9423 prep in,Expression
R6525 T9428 T9427 pobj Sox6-Deficient,in
R6526 T9429 T9430 nsubj Mice,Is
R6527 T9430 T9430 ROOT Is,Is
R6528 T9431 T9430 acomp Due,Is
R6529 T9432 T9431 prep to,Due
R6530 T9433 T9434 det a,Defect
R6531 T9434 T9432 pobj Defect,to
R6532 T9435 T9434 prep in,Defect
R6533 T9436 T9437 det the,ɛy-Gene
R6534 T9437 T9435 pobj ɛy-Gene,in
R6535 T9438 T9431 xcomp Silencing,Due
R6536 T9439 T9438 dobj Mechanism,Silencing
R6537 T9440 T9438 prep in,Silencing

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T9097 47-56 Negative_regulation denotes Deficient
T9096 15-25 Gene_expression denotes Expression
T9095 42-46 Protein denotes Sox6
T9094 32-38 Protein denotes Globin
R6263 T9095 T9097 themeOf Sox6,Deficient
R6262 T9094 T9096 themeOf Globin,Expression

testone

Id Subject Object Predicate Lexical cue
T8976 47-56 Negative_regulation denotes Deficient
T8975 15-25 Gene_expression denotes Expression
T8963 88-90 Protein denotes ɛy
T8962 42-46 Protein denotes Sox6
T8961 29-38 Protein denotes ɛy Globin
R6226 T8961 T8975 themeOf ɛy Globin,Expression
R6227 T8962 T8976 themeOf Sox6,Deficient

test3

Id Subject Object Predicate Lexical cue
T9001 88-90 Protein denotes ɛy
T9000 47-56 Negative_regulation denotes Deficient
T8999 42-46 Protein denotes Sox6
T8998 29-38 Protein denotes ɛy Globin
T8997 15-25 Gene_expression denotes Expression
T8985 88-90 Protein denotes ɛy
T8984 42-46 Protein denotes Sox6
T8983 29-38 Protein denotes ɛy Globin
R6233 T8998 T8997 themeOf ɛy Globin,Expression
R6234 T8999 T9000 themeOf Sox6,Deficient