> top > docs > PMC:1359074 > spans > 19676-19831 > annotations

PMC:1359074 / 19676-19831 JSONTXT

Annnotations TAB JSON ListView MergeView

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7965 149-154 NN denotes dimer
T7964 147-148 DT denotes a
T7963 144-146 IN denotes as
T7962 135-143 RB denotes probably
T7961 133-134 -COMMA- denotes ,
T7960 125-133 NN denotes promoter
T7959 122-124 JJ denotes ɛy
T7958 118-121 DT denotes the
T7957 115-117 TO denotes to
T7956 107-114 VB denotes binding
T7955 98-106 RB denotes directly
T7954 95-97 IN denotes by
T7953 90-94 NN denotes gene
T7952 87-89 JJ denotes ɛy
T7951 83-86 DT denotes the
T7950 80-82 IN denotes of
T7949 70-79 NN denotes repressor
T7948 68-69 DT denotes a
T7947 65-67 IN denotes as
T7946 60-64 VB denotes acts
T7945 55-59 NN denotes Sox6
T7944 50-54 IN denotes that
T7943 41-49 VB denotes indicate
T7942 33-40 RB denotes clearly
T7941 31-32 -RRB- denotes )
T7940 30-31 CD denotes 4
T7939 26-29 CC denotes and
T7938 24-25 CD denotes 3
T7937 16-23 NN denotes Figures
T7936 15-16 -LRB- denotes (
T7935 10-14 NN denotes data
T7934 4-9 JJ denotes above
T7933 0-3 DT denotes The
R5407 T7935 T7933 arg1Of data,The
R5409 T7935 T7934 arg1Of data,above
R5413 T7935 T7936 arg1Of data,(
R5414 T7935 T7943 arg1Of data,indicate
R5421 T7938 T7939 arg1Of 3,and
R5428 T7939 T7936 arg2Of and,(
R5430 T7939 T7937 arg1Of and,Figures
R5433 T7940 T7939 arg2Of 4,and
R5437 T7941 T7936 arg3Of ),(
R5440 T7943 T7942 arg1Of indicate,clearly
R5444 T7945 T7946 arg1Of Sox6,acts
R5445 T7946 T7943 arg2Of acts,indicate
R5448 T7946 T7944 arg1Of acts,that
R5449 T7946 T7947 arg1Of acts,as
R5460 T7946 T7954 arg1Of acts,by
R5462 T7949 T7947 arg2Of repressor,as
R5466 T7949 T7948 arg1Of repressor,a
R5474 T7949 T7950 arg1Of repressor,of
R5476 T7953 T7950 arg2Of gene,of
R5483 T7953 T7951 arg1Of gene,the
R5484 T7953 T7952 arg1Of gene,ɛy
R5485 T7956 T7954 arg2Of binding,by
R5491 T7956 T7955 arg1Of binding,directly
R5492 T7956 T7957 arg1Of binding,to
R5495 T7956 T7961 arg1Of binding,","
R5496 T7956 T7963 arg1Of binding,as
R5497 T7960 T7957 arg2Of promoter,to
R5502 T7960 T7958 arg1Of promoter,the
R5508 T7960 T7959 arg1Of promoter,ɛy
R5509 T7963 T7962 arg1Of as,probably
R5516 T7965 T7963 arg2Of dimer,as
R5523 T7965 T7964 arg1Of dimer,a

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T7272 55-59 Protein denotes Sox6
T7274 122-124 Protein denotes ɛy
T7273 87-89 Protein denotes ɛy

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7989 55-59 http://www.uniprot.org/uniprot/P35712 denotes Sox6

GO-MF

Id Subject Object Predicate Lexical cue
T7285 107-114 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T7165 0-155 Sentence denotes The above data (Figures 3 and 4) clearly indicate that Sox6 acts as a repressor of the ɛy gene by directly binding to the ɛy promoter, probably as a dimer.
T141 0-155 Sentence denotes The above data (Figures 3 and 4) clearly indicate that Sox6 acts as a repressor of the ɛy gene by directly binding to the ɛy promoter, probably as a dimer.

simple1

Id Subject Object Predicate Lexical cue
T7432 122-124 Protein denotes ɛy
T7431 87-89 Protein denotes ɛy
T7430 55-59 Protein denotes Sox6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T8910 70-79 Negative_regulation denotes repressor
T8909 107-114 Binding denotes binding
T8894 122-124 Protein denotes ɛy
T8893 87-89 Protein denotes ɛy
T8892 55-59 Protein denotes Sox6
R6219 T8892 T8909 themeOf Sox6,binding
R6220 T8893 T8910 themeOf ɛy,repressor
R6221 T8893 T8909 themeOf ɛy,binding
R6222 T8894 T8909 themeOf ɛy,binding
R6223 T8894 T8909 themeOf ɛy,binding

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T8038 107-114 Binding denotes binding
T8025 122-124 Protein denotes ɛy
T8024 87-89 Protein denotes ɛy
T8023 55-59 Protein denotes Sox6
R5527 T8023 T8038 themeOf Sox6,binding
R5539 T8024 T8038 themeOf ɛy,binding
R5540 T8025 T8038 themeOf ɛy,binding
R5542 T8025 T8038 themeOf ɛy,binding

DLUT931

Id Subject Object Predicate Lexical cue
T8092 107-114 Binding denotes binding
T8091 70-79 Negative_regulation denotes repressor
T8074 122-124 Protein denotes ɛy
T8073 87-89 Protein denotes ɛy
T8072 55-59 Protein denotes Sox6
R5583 T8072 T8091 causeOf Sox6,repressor
R5584 T8072 T8092 themeOf Sox6,binding
R5585 T8073 T8091 themeOf ɛy,repressor
R5587 T8073 T8091 themeOf ɛy,repressor
R5588 T8074 T8092 themeOf ɛy,binding
R5601 T8092 T8091 causeOf binding,repressor

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T8856 98-124 Binding denotes directly binding to the ɛy
T8839 115-124 Protein denotes to the ɛy
T8811 147-154 Entity denotes a dimer
T8807 55-59 Protein denotes Sox6
T8803 83-94 Protein denotes the ɛy gene
T8794 83-94 Protein denotes the ɛy gene
T8783 125-133 Entity denotes promoter
R6202 T8839 T8856 themeOf to the ɛy,directly binding to the ɛy

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T8697 154-155 . denotes .
T8696 149-154 NN denotes dimer
T8695 147-148 DT denotes a
T8694 144-146 IN denotes as
T8693 135-143 RB denotes probably
T8692 133-134 , denotes ,
T8691 125-133 NN denotes promoter
T8690 122-124 JJ denotes ɛy
T8689 118-121 DT denotes the
T8688 115-117 TO denotes to
T8687 107-114 JJ denotes binding
T8686 98-106 RB denotes directly
T8685 95-97 IN denotes by
T8684 90-94 NN denotes gene
T8683 87-89 JJ denotes ɛy
T8682 83-86 DT denotes the
T8681 80-82 IN denotes of
T8680 70-79 NN denotes repressor
T8679 68-69 DT denotes a
T8678 65-67 IN denotes as
T8677 60-64 NNS denotes acts
T8676 55-59 JJ denotes Sox6
T8675 50-54 IN denotes that
T8674 41-49 VBP denotes indicate
T8673 33-40 RB denotes clearly
T8672 31-32 -RRB- denotes )
T8671 30-31 CD denotes 4
T8670 26-29 CC denotes and
T8669 24-25 CD denotes 3
T8668 16-23 NNS denotes Figures
T8667 15-16 -LRB- denotes (
T8666 10-14 NNS denotes data
T8665 4-9 IN denotes above
T8664 0-3 DT denotes The
R6060 T8664 T8666 det The,data
R6061 T8665 T8666 amod above,data
R6063 T8666 T8674 nsubj data,indicate
R6064 T8667 T8668 punct (,Figures
R6066 T8668 T8674 nsubj Figures,indicate
R6067 T8669 T8668 nummod 3,Figures
R6068 T8670 T8669 cc and,3
R6069 T8671 T8668 appos 4,Figures
R6072 T8672 T8668 punct ),Figures
R6073 T8673 T8674 advmod clearly,indicate
R6075 T8674 T8674 ROOT indicate,indicate
R6076 T8675 T8687 mark that,binding
R6077 T8676 T8677 amod Sox6,acts
R6079 T8677 T8687 nsubj acts,binding
R6080 T8678 T8677 prep as,acts
R6082 T8679 T8680 det a,repressor
R6083 T8680 T8678 pobj repressor,as
R6084 T8681 T8680 prep of,repressor
R6086 T8682 T8684 det the,gene
R6087 T8683 T8684 compound ɛy,gene
R6088 T8684 T8681 pobj gene,of
R6090 T8685 T8677 prep by,acts
R6091 T8686 T8687 advmod directly,binding
R6092 T8687 T8674 ccomp binding,indicate
R6094 T8688 T8687 prep to,binding
R6095 T8689 T8691 det the,promoter
R6097 T8690 T8691 amod ɛy,promoter
R6098 T8691 T8688 pobj promoter,to
R6099 T8692 T8674 punct ",",indicate
R6101 T8693 T8694 advmod probably,as
R6102 T8694 T8674 prep as,indicate
R6103 T8695 T8696 det a,dimer
R6105 T8696 T8694 pobj dimer,as
R6106 T8697 T8674 punct .,indicate

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T7396 107-114 Binding denotes binding
T7395 55-59 Protein denotes Sox6
R5001 T7395 T7396 themeOf Sox6,binding

testone

Id Subject Object Predicate Lexical cue
T7057 125-133 Entity denotes promoter
T7056 122-124 Entity denotes ɛy
T7055 107-114 Binding denotes binding
T7037 122-124 Protein denotes ɛy
T7036 87-89 Protein denotes ɛy
T7035 55-59 Protein denotes Sox6
R4908 T7035 T7055 themeOf Sox6,binding
R4909 T7036 T7055 themeOf ɛy,binding
R4915 T7057 T7056 partOf promoter,ɛy
R4916 T7057 T7055 themeOf promoter,binding

test3

Id Subject Object Predicate Lexical cue
T7138 122-124 Protein denotes ɛy
T7137 107-114 Binding denotes binding
T7136 87-89 Protein denotes ɛy
T7135 55-59 Protein denotes Sox6
T7093 122-124 Protein denotes ɛy
T7092 87-89 Protein denotes ɛy
T7091 55-59 Protein denotes Sox6
R4934 T7135 T7137 themeOf Sox6,binding
R4935 T7136 T7135 themeOf ɛy,Sox6
R4936 T7136 T7137 themeOf ɛy,binding
R4937 T7138 T7137 themeOf ɛy,binding