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PMC:1359074 / 17672-17823 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T7602 149-150 -RRB- denotes )
T7601 147-149 NN denotes 2C
T7600 140-146 NN denotes Figure
T7599 139-140 -LRB- denotes (
T7598 127-138 NN denotes experiments
T7597 118-126 NN denotes analysis
T7596 109-117 NN denotes deletion
T7595 105-108 DT denotes the
T7594 102-104 IN denotes by
T7593 94-101 VB denotes defined
T7592 85-93 NN denotes promoter
T7591 82-84 JJ denotes ɛy
T7590 78-81 DT denotes the
T7589 71-77 IN denotes within
T7588 69-70 -RRB- denotes )
T7587 67-69 NN denotes 3B
T7586 60-66 NN denotes Figure
T7585 59-60 -LRB- denotes (
T7584 52-58 NN denotes region
T7583 46-51 JJ denotes 36-bp
T7582 42-45 DT denotes the
T7581 37-41 IN denotes with
T7580 27-36 VB denotes associate
T7579 16-26 RB denotes physically
T7578 13-15 TO denotes to
T7577 8-12 JJ denotes able
T7576 5-7 VB denotes is
T7575 0-4 NN denotes Sox6
R5176 T7575 T7576 arg1Of Sox6,is
R5177 T7575 T7577 arg1Of Sox6,able
R5178 T7575 T7580 arg1Of Sox6,associate
R5180 T7577 T7576 arg2Of able,is
R5182 T7580 T7577 arg2Of associate,able
R5183 T7580 T7578 arg1Of associate,to
R5184 T7580 T7579 arg1Of associate,physically
R5185 T7580 T7581 arg1Of associate,with
R5186 T7584 T7581 arg2Of region,with
R5187 T7584 T7582 arg1Of region,the
R5188 T7584 T7583 arg1Of region,36-bp
R5189 T7584 T7585 arg1Of region,(
R5190 T7584 T7589 arg1Of region,within
R5192 T7587 T7585 arg2Of 3B,(
R5193 T7587 T7586 arg1Of 3B,Figure
R5195 T7588 T7585 arg3Of ),(
R5198 T7592 T7589 arg2Of promoter,within
R5199 T7592 T7590 arg1Of promoter,the
R5200 T7592 T7591 arg1Of promoter,ɛy
R5201 T7592 T7593 arg2Of promoter,defined
R5202 T7598 T7593 arg1Of experiments,defined
R5203 T7598 T7594 arg2Of experiments,by
R5204 T7598 T7595 arg1Of experiments,the
R5205 T7598 T7596 arg1Of experiments,deletion
R5206 T7598 T7597 arg1Of experiments,analysis
R5207 T7598 T7599 arg1Of experiments,(
R5210 T7601 T7599 arg2Of 2C,(
R5211 T7601 T7600 arg1Of 2C,Figure
R5212 T7602 T7599 arg3Of ),(

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T7236 46-58 Antecedent denotes 36-bp region

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T7250 82-84 Protein denotes ɛy
T7249 0-4 Protein denotes Sox6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T7972 0-4 http://www.uniprot.org/uniprot/P35712 denotes Sox6

sentences

Id Subject Object Predicate Lexical cue
T7148 0-151 Sentence denotes Sox6 is able to physically associate with the 36-bp region (Figure 3B) within the ɛy promoter defined by the deletion analysis experiments (Figure 2C).
T124 0-151 Sentence denotes Sox6 is able to physically associate with the 36-bp region (Figure 3B) within the ɛy promoter defined by the deletion analysis experiments (Figure 2C).

simple1

Id Subject Object Predicate Lexical cue
T7408 82-84 Protein denotes ɛy
T7407 0-4 Protein denotes Sox6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T8900 27-36 Binding denotes associate
T8870 82-84 Protein denotes ɛy
T8869 0-4 Protein denotes Sox6
R6208 T8869 T8900 themeOf Sox6,associate
R6209 T8870 T8900 themeOf ɛy,associate

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T8030 27-36 Binding denotes associate
T8001 82-84 Protein denotes ɛy
T8000 0-4 Protein denotes Sox6
R5546 T8001 T8030 themeOf ɛy,associate

DLUT931

Id Subject Object Predicate Lexical cue
T8080 27-36 Binding denotes associate
T8050 82-84 Protein denotes ɛy
T8049 0-4 Protein denotes Sox6
R5559 T8049 T8080 themeOf Sox6,associate
R5561 T8050 T8080 themeOf ɛy,associate

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T8837 0-4 Protein denotes Sox6
T8770 78-150 Entity denotes the ɛy promoter defined by the deletion analysis experiments (Figure 2C)
T8764 82-84 Protein denotes ɛy
R6178 T8770 T8764 partOf the ɛy promoter defined by the deletion analysis experiments (Figure 2C),ɛy

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T8317 150-151 . denotes .
T8316 149-150 -RRB- denotes )
T8315 147-149 CD denotes 2C
T8314 140-146 NN denotes Figure
T8313 139-140 -LRB- denotes (
T8312 127-138 NNS denotes experiments
T8311 118-126 NN denotes analysis
T8310 109-117 NN denotes deletion
T8309 105-108 DT denotes the
T8308 102-104 IN denotes by
T8307 94-101 VBN denotes defined
T8306 85-93 NN denotes promoter
T8305 82-84 JJ denotes ɛy
T8304 78-81 DT denotes the
T8303 71-77 IN denotes within
T8302 69-70 -RRB- denotes )
T8301 67-69 NN denotes 3B
T8300 60-66 NN denotes Figure
T8299 59-60 -LRB- denotes (
T8298 52-58 NN denotes region
T8297 46-51 JJ denotes 36-bp
T8296 42-45 DT denotes the
T8295 37-41 IN denotes with
T8294 27-36 JJ denotes associate
T8293 16-26 RB denotes physically
T8292 13-15 TO denotes to
T8291 8-12 JJ denotes able
T8290 5-7 VBZ denotes is
T8289 0-4 NNP denotes Sox6
R5826 T8289 T8290 nsubj Sox6,is
R5830 T8290 T8290 ROOT is,is
R5834 T8291 T8290 acomp able,is
R5838 T8292 T8294 aux to,associate
R5842 T8293 T8294 advmod physically,associate
R5846 T8294 T8291 xcomp associate,able
R5850 T8295 T8294 prep with,associate
R5854 T8296 T8298 det the,region
R5858 T8297 T8298 amod 36-bp,region
R5859 T8298 T8295 pobj region,with
R5861 T8299 T8301 punct (,3B
R5862 T8300 T8301 compound Figure,3B
R5864 T8301 T8298 appos 3B,region
R5866 T8302 T8298 punct ),region
R5869 T8303 T8294 prep within,associate
R5873 T8304 T8306 det the,promoter
R5877 T8305 T8306 amod ɛy,promoter
R5879 T8306 T8303 pobj promoter,within
R5881 T8307 T8306 acl defined,promoter
R5884 T8308 T8307 agent by,defined
R5887 T8309 T8312 det the,experiments
R5891 T8310 T8312 compound deletion,experiments
R5894 T8311 T8312 compound analysis,experiments
R5897 T8312 T8308 pobj experiments,by
R5901 T8313 T8314 punct (,Figure
R5904 T8314 T8312 appos Figure,experiments
R5912 T8315 T8314 nummod 2C,Figure
R5916 T8316 T8314 punct ),Figure
R5919 T8317 T8290 punct .,is

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T7353 27-36 Binding denotes associate
T7352 0-4 Protein denotes Sox6
R4986 T7352 T7353 themeOf Sox6,associate

testone

Id Subject Object Predicate Lexical cue
T7045 49-51 Entity denotes bp
T7044 46-48 Entity denotes 36
T7043 27-36 Binding denotes associate
T7013 82-84 Protein denotes ɛy
T7012 0-4 Protein denotes Sox6
R4898 T7012 T7043 themeOf Sox6,associate

test3

Id Subject Object Predicate Lexical cue
T7108 82-84 Protein denotes ɛy
T7107 0-4 Protein denotes Sox6
T7069 82-84 Protein denotes ɛy
T7068 0-4 Protein denotes Sox6