PMC:1359074 / 17526-17671 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/1359074","sourcedb":"PMC","sourceid":"1359074","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1359074","text":"Also included in our EMSA are three mutated probes that are, either truncated (M1), or mutated (M2 and M3) in Sox/Sox6 binding sites (Figure 3A).","tracks":[{"project":"pmc-enju-pas","denotations":[{"id":"T7574","span":{"begin":143,"end":144},"obj":"-RRB-"},{"id":"T7573","span":{"begin":141,"end":143},"obj":"NN"},{"id":"T7572","span":{"begin":134,"end":140},"obj":"NN"},{"id":"T7571","span":{"begin":133,"end":134},"obj":"-LRB-"},{"id":"T7570","span":{"begin":127,"end":132},"obj":"NN"},{"id":"T7569","span":{"begin":119,"end":126},"obj":"NN"},{"id":"T7568","span":{"begin":110,"end":118},"obj":"NN"},{"id":"T7567","span":{"begin":107,"end":109},"obj":"IN"},{"id":"T7566","span":{"begin":105,"end":106},"obj":"-RRB-"},{"id":"T7565","span":{"begin":103,"end":105},"obj":"NN"},{"id":"T7564","span":{"begin":99,"end":102},"obj":"CC"},{"id":"T7563","span":{"begin":96,"end":98},"obj":"NN"},{"id":"T7562","span":{"begin":95,"end":96},"obj":"-LRB-"},{"id":"T7561","span":{"begin":87,"end":94},"obj":"VB"},{"id":"T7560","span":{"begin":84,"end":86},"obj":"CC"},{"id":"T7559","span":{"begin":82,"end":83},"obj":"-COMMA-"},{"id":"T7558","span":{"begin":81,"end":82},"obj":"-RRB-"},{"id":"T7557","span":{"begin":79,"end":81},"obj":"NN"},{"id":"T7556","span":{"begin":78,"end":79},"obj":"-LRB-"},{"id":"T7555","span":{"begin":68,"end":77},"obj":"VB"},{"id":"T7554","span":{"begin":61,"end":67},"obj":"CC"},{"id":"T7553","span":{"begin":59,"end":60},"obj":"-COMMA-"},{"id":"T7552","span":{"begin":56,"end":59},"obj":"VB"},{"id":"T7551","span":{"begin":51,"end":55},"obj":"WDT"},{"id":"T7550","span":{"begin":44,"end":50},"obj":"NN"},{"id":"T7549","span":{"begin":36,"end":43},"obj":"VB"},{"id":"T7548","span":{"begin":30,"end":35},"obj":"CD"},{"id":"T7547","span":{"begin":26,"end":29},"obj":"VB"},{"id":"T7546","span":{"begin":21,"end":25},"obj":"NN"},{"id":"T7545","span":{"begin":17,"end":20},"obj":"PRP-DOLLAR-"},{"id":"T7544","span":{"begin":14,"end":16},"obj":"IN"},{"id":"T7543","span":{"begin":5,"end":13},"obj":"VB"},{"id":"T7542","span":{"begin":0,"end":4},"obj":"RB"}],"relations":[{"id":"R5112","pred":"arg1Of","subj":"T7543","obj":"T7542"},{"id":"R5113","pred":"arg1Of","subj":"T7543","obj":"T7544"},{"id":"R5114","pred":"arg2Of","subj":"T7543","obj":"T7547"},{"id":"R5136","pred":"arg2Of","subj":"T7546","obj":"T7544"},{"id":"R5137","pred":"arg1Of","subj":"T7546","obj":"T7545"},{"id":"R5141","pred":"arg2Of","subj":"T7550","obj":"T7543"},{"id":"R5142","pred":"arg1Of","subj":"T7550","obj":"T7547"},{"id":"R5143","pred":"arg1Of","subj":"T7550","obj":"T7548"},{"id":"R5144","pred":"arg2Of","subj":"T7550","obj":"T7549"},{"id":"R5145","pred":"arg1Of","subj":"T7550","obj":"T7551"},{"id":"R5146","pred":"arg1Of","subj":"T7550","obj":"T7552"},{"id":"R5148","pred":"arg1Of","subj":"T7552","obj":"T7553"},{"id":"R5149","pred":"arg1Of","subj":"T7552","obj":"T7554"},{"id":"R5150","pred":"arg1Of","subj":"T7555","obj":"T7556"},{"id":"R5151","pred":"arg1Of","subj":"T7555","obj":"T7560"},{"id":"R5152","pred":"arg2Of","subj":"T7557","obj":"T7556"},{"id":"R5153","pred":"arg3Of","subj":"T7558","obj":"T7556"},{"id":"R5154","pred":"arg2Of","subj":"T7560","obj":"T7552"},{"id":"R5155","pred":"arg1Of","subj":"T7560","obj":"T7559"},{"id":"R5156","pred":"arg1Of","subj":"T7560","obj":"T7567"},{"id":"R5158","pred":"arg1Of","subj":"T7563","obj":"T7564"},{"id":"R5160","pred":"arg2Of","subj":"T7564","obj":"T7560"},{"id":"R5161","pred":"arg1Of","subj":"T7564","obj":"T7561"},{"id":"R5162","pred":"arg2Of","subj":"T7564","obj":"T7562"},{"id":"R5163","pred":"arg2Of","subj":"T7565","obj":"T7564"},{"id":"R5164","pred":"arg3Of","subj":"T7566","obj":"T7562"},{"id":"R5168","pred":"arg2Of","subj":"T7570","obj":"T7567"},{"id":"R5169","pred":"arg1Of","subj":"T7570","obj":"T7568"},{"id":"R5170","pred":"arg1Of","subj":"T7570","obj":"T7569"},{"id":"R5171","pred":"arg1Of","subj":"T7570","obj":"T7571"},{"id":"R5173","pred":"arg2Of","subj":"T7573","obj":"T7571"},{"id":"R5174","pred":"arg1Of","subj":"T7573","obj":"T7572"},{"id":"R5175","pred":"arg3Of","subj":"T7574","obj":"T7571"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T7574","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7573","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7572","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7571","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7570","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7569","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7568","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7567","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7566","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7565","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7564","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7563","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7562","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7561","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7560","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7559","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7558","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7557","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7556","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7555","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7554","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7553","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7552","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7551","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7550","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7549","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7548","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7547","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7546","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7545","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7544","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7543","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7542","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T7971","span":{"begin":114,"end":118},"obj":"http://www.uniprot.org/uniprot/P35712"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T7971","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"GO-MF","denotations":[{"id":"T7276","span":{"begin":119,"end":126},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"attributes":[{"subj":"T7276","pred":"source","obj":"GO-MF"}]},{"project":"sentences","denotations":[{"id":"T7147","span":{"begin":0,"end":145},"obj":"Sentence"},{"id":"T123","span":{"begin":0,"end":145},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T7147","pred":"source","obj":"sentences"},{"subj":"T123","pred":"source","obj":"sentences"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T8835","span":{"begin":96,"end":98},"obj":"Entity"},{"id":"T8821","span":{"begin":114,"end":118},"obj":"Protein"},{"id":"T8808","span":{"begin":103,"end":105},"obj":"Entity"},{"id":"T8804","span":{"begin":79,"end":81},"obj":"Entity"},{"id":"T8763","span":{"begin":110,"end":118},"obj":"Protein"},{"id":"T8759","span":{"begin":110,"end":118},"obj":"Protein"}],"attributes":[{"subj":"T8835","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T8821","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T8808","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T8804","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T8763","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T8759","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T8288","span":{"begin":144,"end":145},"obj":"."},{"id":"T8287","span":{"begin":143,"end":144},"obj":"-RRB-"},{"id":"T8286","span":{"begin":141,"end":143},"obj":"NN"},{"id":"T8285","span":{"begin":134,"end":140},"obj":"NN"},{"id":"T8284","span":{"begin":133,"end":134},"obj":"-LRB-"},{"id":"T8283","span":{"begin":127,"end":132},"obj":"NNS"},{"id":"T8282","span":{"begin":119,"end":126},"obj":"JJ"},{"id":"T8281","span":{"begin":110,"end":118},"obj":"NNP"},{"id":"T8280","span":{"begin":107,"end":109},"obj":"IN"},{"id":"T8279","span":{"begin":105,"end":106},"obj":"-RRB-"},{"id":"T8278","span":{"begin":103,"end":105},"obj":"CD"},{"id":"T8277","span":{"begin":99,"end":102},"obj":"CC"},{"id":"T8276","span":{"begin":96,"end":98},"obj":"CD"},{"id":"T8275","span":{"begin":95,"end":96},"obj":"-LRB-"},{"id":"T8274","span":{"begin":87,"end":94},"obj":"VBN"},{"id":"T8273","span":{"begin":84,"end":86},"obj":"CC"},{"id":"T8272","span":{"begin":82,"end":83},"obj":","},{"id":"T8271","span":{"begin":81,"end":82},"obj":"-RRB-"},{"id":"T8270","span":{"begin":79,"end":81},"obj":"CD"},{"id":"T8269","span":{"begin":78,"end":79},"obj":"-LRB-"},{"id":"T8268","span":{"begin":68,"end":77},"obj":"VBN"},{"id":"T8267","span":{"begin":61,"end":67},"obj":"CC"},{"id":"T8266","span":{"begin":59,"end":60},"obj":","},{"id":"T8265","span":{"begin":56,"end":59},"obj":"VBP"},{"id":"T8264","span":{"begin":51,"end":55},"obj":"WDT"},{"id":"T8263","span":{"begin":44,"end":50},"obj":"NNS"},{"id":"T8262","span":{"begin":36,"end":43},"obj":"VBN"},{"id":"T8261","span":{"begin":30,"end":35},"obj":"CD"},{"id":"T8260","span":{"begin":26,"end":29},"obj":"VBP"},{"id":"T8259","span":{"begin":21,"end":25},"obj":"NNP"},{"id":"T8258","span":{"begin":17,"end":20},"obj":"PRP$"},{"id":"T8257","span":{"begin":14,"end":16},"obj":"IN"},{"id":"T8256","span":{"begin":5,"end":13},"obj":"VBN"},{"id":"T8255","span":{"begin":0,"end":4},"obj":"RB"}],"relations":[{"id":"R5701","pred":"advmod","subj":"T8255","obj":"T8256"},{"id":"R5708","pred":"ROOT","subj":"T8256","obj":"T8256"},{"id":"R5712","pred":"prep","subj":"T8257","obj":"T8256"},{"id":"R5716","pred":"poss","subj":"T8258","obj":"T8259"},{"id":"R5720","pred":"pobj","subj":"T8259","obj":"T8257"},{"id":"R5724","pred":"auxpass","subj":"T8260","obj":"T8256"},{"id":"R5725","pred":"nummod","subj":"T8261","obj":"T8263"},{"id":"R5726","pred":"amod","subj":"T8262","obj":"T8263"},{"id":"R5727","pred":"nsubjpass","subj":"T8263","obj":"T8256"},{"id":"R5729","pred":"nsubj","subj":"T8264","obj":"T8265"},{"id":"R5733","pred":"relcl","subj":"T8265","obj":"T8263"},{"id":"R5736","pred":"punct","subj":"T8266","obj":"T8265"},{"id":"R5740","pred":"preconj","subj":"T8267","obj":"T8268"},{"id":"R5743","pred":"acomp","subj":"T8268","obj":"T8265"},{"id":"R5747","pred":"punct","subj":"T8269","obj":"T8268"},{"id":"R5751","pred":"npadvmod","subj":"T8270","obj":"T8268"},{"id":"R5758","pred":"punct","subj":"T8271","obj":"T8268"},{"id":"R5762","pred":"punct","subj":"T8272","obj":"T8265"},{"id":"R5766","pred":"cc","subj":"T8273","obj":"T8265"},{"id":"R5769","pred":"conj","subj":"T8274","obj":"T8265"},{"id":"R5770","pred":"punct","subj":"T8275","obj":"T8274"},{"id":"R5772","pred":"dobj","subj":"T8276","obj":"T8274"},{"id":"R5776","pred":"cc","subj":"T8277","obj":"T8276"},{"id":"R5780","pred":"conj","subj":"T8278","obj":"T8276"},{"id":"R5783","pred":"punct","subj":"T8279","obj":"T8276"},{"id":"R5787","pred":"prep","subj":"T8280","obj":"T8274"},{"id":"R5791","pred":"pobj","subj":"T8281","obj":"T8280"},{"id":"R5795","pred":"amod","subj":"T8282","obj":"T8283"},{"id":"R5799","pred":"pobj","subj":"T8283","obj":"T8280"},{"id":"R5802","pred":"punct","subj":"T8284","obj":"T8286"},{"id":"R5810","pred":"compound","subj":"T8285","obj":"T8286"},{"id":"R5814","pred":"npadvmod","subj":"T8286","obj":"T8274"},{"id":"R5818","pred":"punct","subj":"T8287","obj":"T8263"},{"id":"R5822","pred":"punct","subj":"T8288","obj":"T8256"}],"attributes":[{"subj":"T8288","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8287","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8286","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8285","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8284","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8283","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8282","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8281","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8280","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8279","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8278","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8277","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8276","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8275","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8274","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8273","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8272","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8271","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8270","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8269","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8268","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8267","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8266","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8265","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8264","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8263","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8262","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8261","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8260","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8259","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8258","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8257","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8256","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8255","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T7351","span":{"begin":114,"end":118},"obj":"Protein"},{"id":"T7350","span":{"begin":110,"end":113},"obj":"Protein"}],"attributes":[{"subj":"T7351","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T7350","pred":"source","obj":"bionlp-st-ge-2016-test-tees"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"pmc-enju-pas","color":"#eca893","default":true},{"id":"bionlp-st-ge-2016-uniprot","color":"#9397ec"},{"id":"GO-MF","color":"#b1ec93"},{"id":"sentences","color":"#ec93cb"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#93e5ec"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#ecd893"},{"id":"bionlp-st-ge-2016-test-tees","color":"#be93ec"}]}]}}