PMC:1359074 / 17062-17298
Annnotations
pmc-enju-pas
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bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T7247","span":{"begin":158,"end":162},"obj":"Protein"},{"id":"T7246","span":{"begin":145,"end":150},"obj":"Protein"},{"id":"T7245","span":{"begin":60,"end":62},"obj":"Protein"},{"id":"T7244","span":{"begin":23,"end":27},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"To investigate whether Sox6 is directly associated with the ɛy promoter, we first performed electrophoretic mobility shift assays (EMSA) using a c-Myc-tagged Sox6 in a reticulocyte lysate-based transcription/translation in vitro system."}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T7969","span":{"begin":158,"end":162},"obj":"http://www.uniprot.org/uniprot/P35712"},{"id":"T7968","span":{"begin":23,"end":27},"obj":"http://www.uniprot.org/uniprot/P35712"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"To investigate whether Sox6 is directly associated with the ɛy promoter, we first performed electrophoretic mobility shift assays (EMSA) using a c-Myc-tagged Sox6 in a reticulocyte lysate-based transcription/translation in vitro system."}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T7167","span":{"begin":208,"end":219},"obj":"http://purl.obolibrary.org/obo/GO_0006412"},{"id":"T7166","span":{"begin":194,"end":207},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"To investigate whether Sox6 is directly associated with the ɛy promoter, we first performed electrophoretic mobility shift assays (EMSA) using a c-Myc-tagged Sox6 in a reticulocyte lysate-based transcription/translation in vitro system."}
sentences
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simple1
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BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T8899","span":{"begin":40,"end":50},"obj":"Binding"},{"id":"T8867","span":{"begin":158,"end":162},"obj":"Protein"},{"id":"T8866","span":{"begin":145,"end":150},"obj":"Protein"},{"id":"T8865","span":{"begin":60,"end":62},"obj":"Protein"},{"id":"T8864","span":{"begin":23,"end":27},"obj":"Protein"}],"relations":[{"id":"R6207","pred":"themeOf","subj":"T8864","obj":"T8899"}],"text":"To investigate whether Sox6 is directly associated with the ɛy promoter, we first performed electrophoretic mobility shift assays (EMSA) using a c-Myc-tagged Sox6 in a reticulocyte lysate-based transcription/translation in vitro system."}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T8029","span":{"begin":40,"end":50},"obj":"Binding"},{"id":"T7998","span":{"begin":158,"end":162},"obj":"Protein"},{"id":"T7997","span":{"begin":145,"end":150},"obj":"Protein"},{"id":"T7996","span":{"begin":60,"end":62},"obj":"Protein"},{"id":"T7995","span":{"begin":23,"end":27},"obj":"Protein"}],"relations":[{"id":"R5544","pred":"themeOf","subj":"T7995","obj":"T8029"}],"text":"To investigate whether Sox6 is directly associated with the ɛy promoter, we first performed electrophoretic mobility shift assays (EMSA) using a c-Myc-tagged Sox6 in a reticulocyte lysate-based transcription/translation in vitro system."}
DLUT931
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bionlp-st-ge-2016-test-ihmc
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bionlp-st-ge-2016-spacy-parsed
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bionlp-st-ge-2016-test-tees
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testone
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test3
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