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PMC:1359074 / 14053-14249 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6193 189-196 NN denotes binding
T6192 179-188 NN denotes consensus
T6191 170-178 NN denotes Sox/Sox6
T6190 166-169 CD denotes two
T6189 158-165 VB denotes reveals
T6188 151-157 NN denotes region
T6187 145-150 JJ denotes short
T6186 140-144 DT denotes this
T6185 137-139 IN denotes of
T6184 128-136 NN denotes Analysis
T6183 116-126 NN denotes repression
T6182 111-115 NN denotes Sox6
T6181 107-110 IN denotes for
T6180 98-106 JJ denotes critical
T6179 95-97 VB denotes is
T6178 90-94 WDT denotes that
T6177 81-89 NN denotes promoter
T6176 72-80 JJ denotes proximal
T6175 69-71 JJ denotes ɛy
T6174 65-68 DT denotes the
T6173 58-64 IN denotes within
T6172 56-57 -RRB- denotes )
T6171 53-56 CD denotes −37
T6170 50-52 TO denotes to
T6169 46-49 CD denotes −63
T6168 45-46 -LRB- denotes (
T6167 38-44 NN denotes region
T6166 36-37 DT denotes a
T6165 28-35 VB denotes defined
T6164 26-27 -COMMA- denotes ,
T6163 24-26 NN denotes 2C
T6162 17-23 NN denotes Figure
T6161 14-16 IN denotes in
T6160 8-13 VB denotes shown
T6159 5-7 IN denotes as
T6158 3-4 -COMMA- denotes ,
R4313 T6160 T6159 arg2Of shown,as
R4314 T6160 T6161 arg1Of shown,in
R4315 T6163 T6161 arg2Of 2C,in
R4316 T6163 T6162 arg1Of 2C,Figure
R4317 T6165 T6158 arg1Of defined,","
R4318 T6165 T6159 arg1Of defined,as
R4319 T6165 T6164 arg1Of defined,","
R4320 T6167 T6165 arg2Of region,defined
R4321 T6167 T6166 arg1Of region,a
R4322 T6167 T6168 arg1Of region,(
R4323 T6167 T6173 arg1Of region,within
R4324 T6171 T6168 arg2Of −37,(
R4325 T6171 T6169 arg1Of −37,−63
R4326 T6171 T6170 arg1Of −37,to
R4327 T6172 T6168 arg3Of ),(
R4328 T6177 T6173 arg2Of promoter,within
R4329 T6177 T6174 arg1Of promoter,the
R4330 T6177 T6175 arg1Of promoter,ɛy
R4331 T6177 T6176 arg1Of promoter,proximal
R4332 T6177 T6178 arg1Of promoter,that
R4333 T6177 T6179 arg1Of promoter,is
R4334 T6177 T6180 arg1Of promoter,critical
R4335 T6180 T6179 arg2Of critical,is
R4336 T6180 T6181 arg1Of critical,for
R4337 T6183 T6181 arg2Of repression,for
R4338 T6183 T6182 arg1Of repression,Sox6
R4339 T6184 T6185 arg1Of Analysis,of
R4340 T6184 T6189 arg1Of Analysis,reveals
R4341 T6188 T6185 arg2Of region,of
R4342 T6188 T6186 arg1Of region,this
R4343 T6188 T6187 arg1Of region,short

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T5692 111-115 Protein denotes Sox6
T5691 69-71 Protein denotes ɛy

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6214 174-178 http://www.uniprot.org/uniprot/P35712 denotes Sox6
T6213 111-115 http://www.uniprot.org/uniprot/P35712 denotes Sox6

GO-MF

Id Subject Object Predicate Lexical cue
T5697 189-196 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

simple1

Id Subject Object Predicate Lexical cue
T5815 111-115 Protein denotes Sox6
T5814 69-71 Protein denotes ɛy

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T6932 116-126 Negative_regulation denotes repression
T6914 111-115 Protein denotes Sox6
T6913 69-71 Protein denotes ɛy
R4886 T6914 T6932 themeOf Sox6,repression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6270 116-126 Negative_regulation denotes repression
T6253 111-115 Protein denotes Sox6
T6252 69-71 Protein denotes ɛy
R4377 T6253 T6270 themeOf Sox6,repression

DLUT931

Id Subject Object Predicate Lexical cue
T6322 116-126 Negative_regulation denotes repression
T6303 111-115 Protein denotes Sox6
T6302 69-71 Protein denotes ɛy
R4409 T6303 T6322 themeOf Sox6,repression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T6871 111-115 Protein denotes Sox6
T6838 65-89 Entity denotes the ɛy proximal promoter
T6821 69-71 Protein denotes ɛy
T6819 166-188 Protein denotes two Sox/Sox6 consensus
R4854 T6838 T6821 partOf the ɛy proximal promoter,ɛy

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6754 189-196 JJ denotes binding
T6753 179-188 NN denotes consensus
T6752 170-178 JJ denotes Sox/Sox6
T6751 166-169 CD denotes two
T6750 158-165 VBZ denotes reveals
T6749 151-157 NN denotes region
T6748 145-150 JJ denotes short
T6747 140-144 DT denotes this
T6746 137-139 IN denotes of
T6745 128-136 NN denotes Analysis
T6744 126-127 . denotes .
T6743 116-126 NN denotes repression
T6742 111-115 JJ denotes Sox6
T6741 107-110 IN denotes for
T6740 98-106 JJ denotes critical
T6739 95-97 VBZ denotes is
T6738 90-94 WDT denotes that
T6737 81-89 NN denotes promoter
T6736 72-80 JJ denotes proximal
T6735 69-71 JJ denotes ɛy
T6734 65-68 DT denotes the
T6733 58-64 IN denotes within
T6732 56-57 -RRB- denotes )
T6731 54-56 CD denotes 37
T6730 53-54 CD denotes −
T6729 50-52 TO denotes to
T6728 47-49 CD denotes 63
T6727 46-47 FW denotes −
T6726 45-46 -LRB- denotes (
T6725 38-44 NN denotes region
T6724 36-37 DT denotes a
T6723 28-35 VBD denotes defined
T6722 26-27 , denotes ,
T6721 24-26 CD denotes 2C
T6720 17-23 NN denotes Figure
T6719 14-16 IN denotes in
T6718 8-13 VBN denotes shown
T6717 5-7 IN denotes as
T6716 3-4 , denotes ,
R4780 T6717 T6718 mark as,shown
R4782 T6719 T6718 prep in,shown
R4783 T6720 T6719 pobj Figure,in
R4784 T6721 T6720 nummod 2C,Figure
R4785 T6722 T6723 punct ",",defined
R4786 T6723 T6723 ROOT defined,defined
R4787 T6724 T6725 det a,region
R4788 T6725 T6723 dobj region,defined
R4789 T6726 T6727 punct (,−
R4790 T6727 T6728 amod −,63
R4791 T6728 T6723 npadvmod 63,defined
R4792 T6729 T6728 prep to,63
R4793 T6730 T6729 pobj −,to
R4794 T6731 T6730 appos 37,−
R4795 T6732 T6730 punct ),−
R4796 T6733 T6729 prep within,to
R4797 T6734 T6737 det the,promoter
R4798 T6735 T6737 amod ɛy,promoter
R4799 T6736 T6737 amod proximal,promoter
R4800 T6737 T6733 pobj promoter,within
R4801 T6738 T6739 nsubj that,is
R4802 T6739 T6737 relcl is,promoter
R4803 T6740 T6739 acomp critical,is
R4804 T6741 T6740 prep for,critical
R4805 T6742 T6743 amod Sox6,repression
R4806 T6743 T6741 pobj repression,for
R4807 T6744 T6723 punct .,defined
R4808 T6745 T6750 nsubj Analysis,reveals
R4809 T6746 T6745 prep of,Analysis
R4810 T6747 T6749 det this,region
R4811 T6748 T6749 amod short,region
R4812 T6749 T6746 pobj region,of
R4813 T6750 T6750 ROOT reveals,reveals

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T5749 174-178 Protein denotes Sox6
T5748 170-173 Protein denotes Sox
T5747 116-126 Gene_expression denotes repression
T5746 111-115 Protein denotes Sox6
R3960 T5746 T5747 themeOf Sox6,repression

testone

Id Subject Object Predicate Lexical cue
T5505 111-115 Protein denotes Sox6
T5504 69-71 Protein denotes ɛy

test3

Id Subject Object Predicate Lexical cue
T5591 111-115 Protein denotes Sox6
T5590 69-71 Protein denotes ɛy
T5550 111-115 Protein denotes Sox6
T5549 69-71 Protein denotes ɛy
R3916 T5591 T5590 themeOf Sox6,ɛy