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PMC:1359074 / 14020-14180 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6183 149-159 NN denotes repression
T6182 144-148 NN denotes Sox6
T6181 140-143 IN denotes for
T6180 131-139 JJ denotes critical
T6179 128-130 VB denotes is
T6178 123-127 WDT denotes that
T6177 114-122 NN denotes promoter
T6176 105-113 JJ denotes proximal
T6175 102-104 JJ denotes ɛy
T6174 98-101 DT denotes the
T6173 91-97 IN denotes within
T6172 89-90 -RRB- denotes )
T6171 86-89 CD denotes −37
T6170 83-85 TO denotes to
T6169 79-82 CD denotes −63
T6168 78-79 -LRB- denotes (
T6167 71-77 NN denotes region
T6166 69-70 DT denotes a
T6165 61-68 VB denotes defined
T6164 59-60 -COMMA- denotes ,
T6163 57-59 NN denotes 2C
T6162 50-56 NN denotes Figure
T6161 47-49 IN denotes in
T6160 41-46 VB denotes shown
T6159 38-40 IN denotes as
T6158 36-37 -COMMA- denotes ,
T6157 28-36 NN denotes promoter
T6156 25-27 JJ denotes ɛy
T6155 21-24 DT denotes the
T6154 18-20 IN denotes of
T6153 9-17 NN denotes analysis
T6152 0-8 NN denotes Deletion
R4307 T6153 T6152 arg1Of analysis,Deletion
R4308 T6153 T6154 arg1Of analysis,of
R4309 T6153 T6165 arg1Of analysis,defined
R4310 T6157 T6154 arg2Of promoter,of
R4311 T6157 T6155 arg1Of promoter,the
R4312 T6157 T6156 arg1Of promoter,ɛy
R4313 T6160 T6159 arg2Of shown,as
R4314 T6160 T6161 arg1Of shown,in
R4315 T6163 T6161 arg2Of 2C,in
R4316 T6163 T6162 arg1Of 2C,Figure
R4317 T6165 T6158 arg1Of defined,","
R4318 T6165 T6159 arg1Of defined,as
R4319 T6165 T6164 arg1Of defined,","
R4320 T6167 T6165 arg2Of region,defined
R4321 T6167 T6166 arg1Of region,a
R4322 T6167 T6168 arg1Of region,(
R4323 T6167 T6173 arg1Of region,within
R4324 T6171 T6168 arg2Of −37,(
R4325 T6171 T6169 arg1Of −37,−63
R4326 T6171 T6170 arg1Of −37,to
R4327 T6172 T6168 arg3Of ),(
R4328 T6177 T6173 arg2Of promoter,within
R4329 T6177 T6174 arg1Of promoter,the
R4330 T6177 T6175 arg1Of promoter,ɛy
R4331 T6177 T6176 arg1Of promoter,proximal
R4332 T6177 T6178 arg1Of promoter,that
R4333 T6177 T6179 arg1Of promoter,is
R4334 T6177 T6180 arg1Of promoter,critical
R4335 T6180 T6179 arg2Of critical,is
R4336 T6180 T6181 arg1Of critical,for
R4337 T6183 T6181 arg2Of repression,for
R4338 T6183 T6182 arg1Of repression,Sox6

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T5692 144-148 Protein denotes Sox6
T5691 102-104 Protein denotes ɛy
T5690 25-27 Protein denotes ɛy

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6213 144-148 http://www.uniprot.org/uniprot/P35712 denotes Sox6

sentences

Id Subject Object Predicate Lexical cue
T5604 0-160 Sentence denotes Deletion analysis of the ɛy promoter, as shown in Figure 2C, defined a region (−63 to −37) within the ɛy proximal promoter that is critical for Sox6 repression.
T94 0-160 Sentence denotes Deletion analysis of the ɛy promoter, as shown in Figure 2C, defined a region (−63 to −37) within the ɛy proximal promoter that is critical for Sox6 repression.

simple1

Id Subject Object Predicate Lexical cue
T5815 144-148 Protein denotes Sox6
T5814 102-104 Protein denotes ɛy
T5813 25-27 Protein denotes ɛy

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T6932 149-159 Negative_regulation denotes repression
T6914 144-148 Protein denotes Sox6
T6913 102-104 Protein denotes ɛy
T6912 25-27 Protein denotes ɛy
R4886 T6914 T6932 themeOf Sox6,repression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6270 149-159 Negative_regulation denotes repression
T6253 144-148 Protein denotes Sox6
T6252 102-104 Protein denotes ɛy
T6251 25-27 Protein denotes ɛy
R4377 T6253 T6270 themeOf Sox6,repression

DLUT931

Id Subject Object Predicate Lexical cue
T6322 149-159 Negative_regulation denotes repression
T6303 144-148 Protein denotes Sox6
T6302 102-104 Protein denotes ɛy
T6301 25-27 Protein denotes ɛy
R4409 T6303 T6322 themeOf Sox6,repression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T6876 25-27 Protein denotes ɛy
T6875 18-36 Entity denotes of the ɛy promoter
T6871 144-148 Protein denotes Sox6
T6838 98-122 Entity denotes the ɛy proximal promoter
T6821 102-104 Protein denotes ɛy
R4854 T6838 T6821 partOf the ɛy proximal promoter,ɛy
R4863 T6875 T6876 partOf of the ɛy promoter,ɛy

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6744 159-160 . denotes .
T6743 149-159 NN denotes repression
T6742 144-148 JJ denotes Sox6
T6741 140-143 IN denotes for
T6740 131-139 JJ denotes critical
T6739 128-130 VBZ denotes is
T6738 123-127 WDT denotes that
T6737 114-122 NN denotes promoter
T6736 105-113 JJ denotes proximal
T6735 102-104 JJ denotes ɛy
T6734 98-101 DT denotes the
T6733 91-97 IN denotes within
T6732 89-90 -RRB- denotes )
T6731 87-89 CD denotes 37
T6730 86-87 CD denotes −
T6729 83-85 TO denotes to
T6728 80-82 CD denotes 63
T6727 79-80 FW denotes −
T6726 78-79 -LRB- denotes (
T6725 71-77 NN denotes region
T6724 69-70 DT denotes a
T6723 61-68 VBD denotes defined
T6722 59-60 , denotes ,
T6721 57-59 CD denotes 2C
T6720 50-56 NN denotes Figure
T6719 47-49 IN denotes in
T6718 41-46 VBN denotes shown
T6717 38-40 IN denotes as
T6716 36-37 , denotes ,
T6715 28-36 NN denotes promoter
T6714 25-27 JJ denotes ɛy
T6713 21-24 DT denotes the
T6712 18-20 IN denotes of
T6711 9-17 NN denotes analysis
T6710 0-8 NN denotes Deletion
R4773 T6710 T6711 compound Deletion,analysis
R4774 T6711 T6723 nsubj analysis,defined
R4775 T6712 T6711 prep of,analysis
R4776 T6713 T6715 det the,promoter
R4777 T6714 T6715 amod ɛy,promoter
R4778 T6715 T6712 pobj promoter,of
R4779 T6716 T6711 punct ",",analysis
R4780 T6717 T6718 mark as,shown
R4781 T6718 T6711 advcl shown,analysis
R4782 T6719 T6718 prep in,shown
R4783 T6720 T6719 pobj Figure,in
R4784 T6721 T6720 nummod 2C,Figure
R4785 T6722 T6723 punct ",",defined
R4786 T6723 T6723 ROOT defined,defined
R4787 T6724 T6725 det a,region
R4788 T6725 T6723 dobj region,defined
R4789 T6726 T6727 punct (,−
R4790 T6727 T6728 amod −,63
R4791 T6728 T6723 npadvmod 63,defined
R4792 T6729 T6728 prep to,63
R4793 T6730 T6729 pobj −,to
R4794 T6731 T6730 appos 37,−
R4795 T6732 T6730 punct ),−
R4796 T6733 T6729 prep within,to
R4797 T6734 T6737 det the,promoter
R4798 T6735 T6737 amod ɛy,promoter
R4799 T6736 T6737 amod proximal,promoter
R4800 T6737 T6733 pobj promoter,within
R4801 T6738 T6739 nsubj that,is
R4802 T6739 T6737 relcl is,promoter
R4803 T6740 T6739 acomp critical,is
R4804 T6741 T6740 prep for,critical
R4805 T6742 T6743 amod Sox6,repression
R4806 T6743 T6741 pobj repression,for
R4807 T6744 T6723 punct .,defined

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T5747 149-159 Gene_expression denotes repression
T5746 144-148 Protein denotes Sox6
R3960 T5746 T5747 themeOf Sox6,repression

testone

Id Subject Object Predicate Lexical cue
T5517 0-8 Negative_regulation denotes Deletion
T5505 144-148 Protein denotes Sox6
T5504 102-104 Protein denotes ɛy
T5503 25-27 Protein denotes ɛy

test3

Id Subject Object Predicate Lexical cue
T5591 144-148 Protein denotes Sox6
T5590 102-104 Protein denotes ɛy
T5589 25-27 Protein denotes ɛy
T5550 144-148 Protein denotes Sox6
T5549 102-104 Protein denotes ɛy
T5548 25-27 Protein denotes ɛy
R3916 T5591 T5590 themeOf Sox6,ɛy