PMC:1359074 / 13507-13757 JSONTXT

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    2_test

    {"project":"2_test","denotations":[{"id":"16462943-11504872-85760995","span":{"begin":247,"end":248},"obj":"11504872"},{"id":"T88558","span":{"begin":247,"end":248},"obj":"11504872"}],"text":"To investigate whether the interaction with CtBP2 is required for Sox6 repression of the ɛy promoter, we introduced a point mutation (L386H) in the Sox6 protein that has been previously reported to be sufficient to abolish Sox6-CtBP2 interaction [5]."}

    pmc-enju-pas

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investigate whether the interaction with CtBP2 is required for Sox6 repression of the ɛy promoter, we introduced a point mutation (L386H) in the Sox6 protein that has been previously reported to be sufficient to abolish Sox6-CtBP2 interaction [5]."}

    bionlp-st-ge-2016-test-proteins

    {"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T5681","span":{"begin":89,"end":91},"obj":"Protein"},{"id":"T5680","span":{"begin":66,"end":70},"obj":"Protein"},{"id":"T5679","span":{"begin":44,"end":49},"obj":"Protein"},{"id":"T5684","span":{"begin":228,"end":233},"obj":"Protein"},{"id":"T5683","span":{"begin":223,"end":227},"obj":"Protein"},{"id":"T5682","span":{"begin":148,"end":152},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"To investigate whether the interaction with CtBP2 is required for Sox6 repression of the ɛy promoter, we introduced a point mutation (L386H) in the Sox6 protein that has been previously reported to be sufficient to abolish Sox6-CtBP2 interaction [5]."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T6219","span":{"begin":228,"end":233},"obj":"http://www.uniprot.org/uniprot/P56545"},{"id":"T6218","span":{"begin":44,"end":49},"obj":"http://www.uniprot.org/uniprot/P56545"},{"id":"T6210","span":{"begin":223,"end":227},"obj":"http://www.uniprot.org/uniprot/P35712"},{"id":"T6209","span":{"begin":148,"end":152},"obj":"http://www.uniprot.org/uniprot/P35712"},{"id":"T6208","span":{"begin":66,"end":70},"obj":"http://www.uniprot.org/uniprot/P35712"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"To investigate whether the interaction with CtBP2 is required for Sox6 repression of the ɛy promoter, we introduced a point mutation (L386H) in the Sox6 protein that has been previously reported to be sufficient to abolish Sox6-CtBP2 interaction [5]."}

    sentences

    {"project":"sentences","denotations":[{"id":"T5601","span":{"begin":0,"end":250},"obj":"Sentence"},{"id":"T91","span":{"begin":0,"end":250},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"To investigate whether the interaction with CtBP2 is required for Sox6 repression of the ɛy promoter, we introduced a point mutation (L386H) in the Sox6 protein that has been previously reported to be sufficient to abolish Sox6-CtBP2 interaction [5]."}

    simple1

    {"project":"simple1","denotations":[{"id":"T5807","span":{"begin":228,"end":233},"obj":"Protein"},{"id":"T5806","span":{"begin":223,"end":227},"obj":"Protein"},{"id":"T5805","span":{"begin":148,"end":152},"obj":"Protein"},{"id":"T5804","span":{"begin":89,"end":91},"obj":"Protein"},{"id":"T5803","span":{"begin":66,"end":70},"obj":"Protein"},{"id":"T5802","span":{"begin":44,"end":49},"obj":"Protein"}],"text":"To investigate whether the interaction with CtBP2 is required for Sox6 repression of the ɛy promoter, we introduced a point mutation (L386H) in the Sox6 protein that has been previously reported to be sufficient to abolish Sox6-CtBP2 interaction [5]."}

    BioNLP16_DUT

    {"project":"BioNLP16_DUT","denotations":[{"id":"T6929","span":{"begin":27,"end":38},"obj":"Binding"},{"id":"T6928","span":{"begin":71,"end":81},"obj":"Negative_regulation"},{"id":"T6927","span":{"begin":234,"end":245},"obj":"Binding"},{"id":"T6926","span":{"begin":215,"end":222},"obj":"Negative_regulation"},{"id":"T6925","span":{"begin":53,"end":61},"obj":"Positive_regulation"},{"id":"T6906","span":{"begin":228,"end":233},"obj":"Protein"},{"id":"T6905","span":{"begin":223,"end":227},"obj":"Protein"},{"id":"T6904","span":{"begin":148,"end":152},"obj":"Protein"},{"id":"T6903","span":{"begin":89,"end":91},"obj":"Protein"},{"id":"T6902","span":{"begin":66,"end":70},"obj":"Protein"},{"id":"T6901","span":{"begin":44,"end":49},"obj":"Protein"}],"relations":[{"id":"R4877","pred":"themeOf","subj":"T6901","obj":"T6929"},{"id":"R4878","pred":"themeOf","subj":"T6902","obj":"T6928"},{"id":"R4879","pred":"themeOf","subj":"T6903","obj":"T6928"},{"id":"R4880","pred":"themeOf","subj":"T6905","obj":"T6927"},{"id":"R4881","pred":"themeOf","subj":"T6906","obj":"T6927"},{"id":"R4889","pred":"themeOf","subj":"T6927","obj":"T6926"},{"id":"R4890","pred":"themeOf","subj":"T6927","obj":"T6926"},{"id":"R4891","pred":"themeOf","subj":"T6928","obj":"T6925"},{"id":"R4892","pred":"themeOf","subj":"T6928","obj":"T6925"},{"id":"R4893","pred":"causeOf","subj":"T6929","obj":"T6925"},{"id":"R4894","pred":"causeOf","subj":"T6929","obj":"T6925"}],"text":"To investigate whether the interaction with CtBP2 is required for Sox6 repression of the ɛy promoter, we introduced a point mutation (L386H) in the Sox6 protein that has been previously reported to be sufficient to abolish Sox6-CtBP2 interaction [5]."}

    BioNLP16_Messiy

    {"project":"BioNLP16_Messiy","denotations":[{"id":"T6266","span":{"begin":27,"end":38},"obj":"Binding"},{"id":"T6265","span":{"begin":234,"end":245},"obj":"Binding"},{"id":"T6264","span":{"begin":53,"end":61},"obj":"Positive_regulation"},{"id":"T6263","span":{"begin":215,"end":222},"obj":"Negative_regulation"},{"id":"T6262","span":{"begin":71,"end":81},"obj":"Negative_regulation"},{"id":"T6245","span":{"begin":228,"end":233},"obj":"Protein"},{"id":"T6244","span":{"begin":223,"end":227},"obj":"Protein"},{"id":"T6243","span":{"begin":148,"end":152},"obj":"Protein"},{"id":"T6242","span":{"begin":89,"end":91},"obj":"Protein"},{"id":"T6241","span":{"begin":66,"end":70},"obj":"Protein"},{"id":"T6240","span":{"begin":44,"end":49},"obj":"Protein"}],"relations":[{"id":"R4369","pred":"themeOf","subj":"T6240","obj":"T6266"},{"id":"R4370","pred":"themeOf","subj":"T6241","obj":"T6262"},{"id":"R4371","pred":"themeOf","subj":"T6244","obj":"T6265"},{"id":"R4372","pred":"themeOf","subj":"T6245","obj":"T6265"},{"id":"R4378","pred":"themeOf","subj":"T6262","obj":"T6264"},{"id":"R4379","pred":"themeOf","subj":"T6265","obj":"T6263"},{"id":"R4380","pred":"themeOf","subj":"T6265","obj":"T6263"}],"text":"To investigate whether the interaction with CtBP2 is required for Sox6 repression of the ɛy promoter, we introduced a point mutation (L386H) in the Sox6 protein that has been previously reported to be sufficient to abolish Sox6-CtBP2 interaction [5]."}

    DLUT931

    {"project":"DLUT931","denotations":[{"id":"T6318","span":{"begin":215,"end":222},"obj":"Negative_regulation"},{"id":"T6317","span":{"begin":53,"end":61},"obj":"Positive_regulation"},{"id":"T6316","span":{"begin":234,"end":245},"obj":"Binding"},{"id":"T6315","span":{"begin":124,"end":132},"obj":"Regulation"},{"id":"T6314","span":{"begin":71,"end":81},"obj":"Negative_regulation"},{"id":"T6313","span":{"begin":27,"end":38},"obj":"Binding"},{"id":"T6295","span":{"begin":228,"end":233},"obj":"Protein"},{"id":"T6294","span":{"begin":223,"end":227},"obj":"Protein"},{"id":"T6293","span":{"begin":148,"end":152},"obj":"Protein"},{"id":"T6292","span":{"begin":89,"end":91},"obj":"Protein"},{"id":"T6291","span":{"begin":66,"end":70},"obj":"Protein"},{"id":"T6290","span":{"begin":44,"end":49},"obj":"Protein"}],"relations":[{"id":"R4399","pred":"themeOf","subj":"T6290","obj":"T6313"},{"id":"R4400","pred":"themeOf","subj":"T6291","obj":"T6314"},{"id":"R4401","pred":"themeOf","subj":"T6292","obj":"T6314"},{"id":"R4402","pred":"themeOf","subj":"T6293","obj":"T6315"},{"id":"R4403","pred":"themeOf","subj":"T6294","obj":"T6316"},{"id":"R4404","pred":"themeOf","subj":"T6295","obj":"T6316"},{"id":"R4410","pred":"causeOf","subj":"T6313","obj":"T6317"},{"id":"R4411","pred":"causeOf","subj":"T6313","obj":"T6317"},{"id":"R4412","pred":"themeOf","subj":"T6314","obj":"T6317"},{"id":"R4413","pred":"themeOf","subj":"T6314","obj":"T6317"},{"id":"R4414","pred":"themeOf","subj":"T6316","obj":"T6318"}],"text":"To investigate whether the interaction with CtBP2 is required for Sox6 repression of the ɛy promoter, we introduced a point mutation (L386H) in the Sox6 protein that has been previously reported to be sufficient to abolish Sox6-CtBP2 interaction [5]."}

    bionlp-st-ge-2016-test-ihmc

    {"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T6881","span":{"begin":223,"end":249},"obj":"Binding"},{"id":"T6880","span":{"begin":23,"end":49},"obj":"Binding"},{"id":"T6873","span":{"begin":82,"end":100},"obj":"Entity"},{"id":"T6864","span":{"begin":89,"end":91},"obj":"Protein"},{"id":"T6862","span":{"begin":148,"end":152},"obj":"Protein"},{"id":"T6853","span":{"begin":144,"end":200},"obj":"Protein"},{"id":"T6842","span":{"begin":223,"end":249},"obj":"Protein"},{"id":"T6835","span":{"begin":228,"end":233},"obj":"Protein"},{"id":"T6825","span":{"begin":66,"end":70},"obj":"Protein"},{"id":"T6813","span":{"begin":39,"end":49},"obj":"Protein"}],"relations":[{"id":"R4850","pred":"themeOf","subj":"T6813","obj":"T6880"},{"id":"R4852","pred":"themeOf","subj":"T6835","obj":"T6881"},{"id":"R4861","pred":"partOf","subj":"T6873","obj":"T6864"}],"text":"To investigate whether the interaction with CtBP2 is required for Sox6 repression of the ɛy promoter, we introduced a point mutation (L386H) in the Sox6 protein that has been previously reported to be sufficient to abolish Sox6-CtBP2 interaction [5]."}

    bionlp-st-ge-2016-spacy-parsed

    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investigate whether the interaction with CtBP2 is required for Sox6 repression of the ɛy promoter, we introduced a point mutation (L386H) in the Sox6 protein that has been previously reported to be sufficient to abolish Sox6-CtBP2 interaction [5]."}

    bionlp-st-ge-2016-test-tees

    {"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T5740","span":{"begin":215,"end":222},"obj":"Negative_regulation"},{"id":"T5739","span":{"begin":53,"end":61},"obj":"Positive_regulation"},{"id":"T5738","span":{"begin":234,"end":245},"obj":"Binding"},{"id":"T5737","span":{"begin":71,"end":81},"obj":"Gene_expression"},{"id":"T5736","span":{"begin":27,"end":38},"obj":"Binding"},{"id":"T5735","span":{"begin":228,"end":233},"obj":"Protein"},{"id":"T5734","span":{"begin":223,"end":227},"obj":"Protein"},{"id":"T5733","span":{"begin":148,"end":160},"obj":"Protein"},{"id":"T5732","span":{"begin":66,"end":70},"obj":"Protein"},{"id":"T5731","span":{"begin":44,"end":49},"obj":"Protein"}],"relations":[{"id":"R3953","pred":"themeOf","subj":"T5731","obj":"T5736"},{"id":"R3954","pred":"themeOf","subj":"T5732","obj":"T5737"},{"id":"R3955","pred":"themeOf","subj":"T5734","obj":"T5738"},{"id":"R3956","pred":"themeOf","subj":"T5735","obj":"T5738"},{"id":"R3957","pred":"causeOf","subj":"T5736","obj":"T5739"},{"id":"R3958","pred":"themeOf","subj":"T5737","obj":"T5739"},{"id":"R3959","pred":"themeOf","subj":"T5738","obj":"T5740"}],"text":"To investigate whether the interaction with CtBP2 is required for Sox6 repression of the ɛy promoter, we introduced a point mutation (L386H) in the Sox6 protein that has been previously reported to be sufficient to abolish Sox6-CtBP2 interaction [5]."}

    testone

    {"project":"testone","denotations":[{"id":"T5515","span":{"begin":234,"end":245},"obj":"Binding"},{"id":"T5514","span":{"begin":215,"end":222},"obj":"Negative_regulation"},{"id":"T5513","span":{"begin":71,"end":81},"obj":"Negative_regulation"},{"id":"T5512","span":{"begin":27,"end":38},"obj":"Binding"},{"id":"T5497","span":{"begin":228,"end":233},"obj":"Protein"},{"id":"T5496","span":{"begin":223,"end":227},"obj":"Protein"},{"id":"T5495","span":{"begin":148,"end":152},"obj":"Protein"},{"id":"T5494","span":{"begin":89,"end":91},"obj":"Protein"},{"id":"T5493","span":{"begin":66,"end":70},"obj":"Protein"},{"id":"T5492","span":{"begin":44,"end":49},"obj":"Protein"}],"relations":[{"id":"R3890","pred":"themeOf","subj":"T5492","obj":"T5512"},{"id":"R3891","pred":"themeOf","subj":"T5496","obj":"T5515"},{"id":"R3892","pred":"themeOf","subj":"T5497","obj":"T5515"},{"id":"R3896","pred":"themeOf","subj":"T5515","obj":"T5514"}],"text":"To investigate whether the interaction with CtBP2 is required for Sox6 repression of the ɛy promoter, we introduced a point mutation (L386H) in the Sox6 protein that has been previously reported to be sufficient to abolish Sox6-CtBP2 interaction [5]."}

    test3

    {"project":"test3","denotations":[{"id":"T5583","span":{"begin":234,"end":245},"obj":"Binding"},{"id":"T5582","span":{"begin":228,"end":233},"obj":"Protein"},{"id":"T5581","span":{"begin":223,"end":227},"obj":"Protein"},{"id":"T5580","span":{"begin":148,"end":152},"obj":"Protein"},{"id":"T5579","span":{"begin":89,"end":91},"obj":"Protein"},{"id":"T5578","span":{"begin":71,"end":81},"obj":"Negative_regulation"},{"id":"T5577","span":{"begin":66,"end":70},"obj":"Protein"},{"id":"T5576","span":{"begin":53,"end":61},"obj":"Positive_regulation"},{"id":"T5575","span":{"begin":44,"end":49},"obj":"Protein"},{"id":"T5574","span":{"begin":27,"end":38},"obj":"Binding"},{"id":"T5542","span":{"begin":228,"end":233},"obj":"Protein"},{"id":"T5541","span":{"begin":223,"end":227},"obj":"Protein"},{"id":"T5540","span":{"begin":148,"end":152},"obj":"Protein"},{"id":"T5539","span":{"begin":89,"end":91},"obj":"Protein"},{"id":"T5538","span":{"begin":66,"end":70},"obj":"Protein"},{"id":"T5537","span":{"begin":44,"end":49},"obj":"Protein"}],"relations":[{"id":"R3907","pred":"causeOf","subj":"T5574","obj":"T5576"},{"id":"R3908","pred":"themeOf","subj":"T5575","obj":"T5574"},{"id":"R3909","pred":"themeOf","subj":"T5578","obj":"T5576"},{"id":"R3910","pred":"themeOf","subj":"T5578","obj":"T5577"},{"id":"R3911","pred":"themeOf","subj":"T5579","obj":"T5577"},{"id":"R3912","pred":"themeOf","subj":"T5581","obj":"T5583"},{"id":"R3913","pred":"themeOf","subj":"T5582","obj":"T5583"}],"text":"To investigate whether the interaction with CtBP2 is required for Sox6 repression of the ɛy promoter, we introduced a point mutation (L386H) in the Sox6 protein that has been previously reported to be sufficient to abolish Sox6-CtBP2 interaction [5]."}