
PMC:1359074 / 13323-13452
Annnotations
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
16462943-11504872-85760994 | 126-127 | 11504872 | denotes | 5 |
T36890 | 126-127 | 11504872 | denotes | 5 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6050 | 127-128 | -RRB- | denotes | ] |
T6049 | 126-127 | CD | denotes | 5 |
T6048 | 125-126 | -LRB- | denotes | [ |
T6047 | 116-124 | NN | denotes | promoter |
T6046 | 110-115 | NN | denotes | fgf-3 |
T6045 | 106-109 | DT | denotes | the |
T6044 | 103-105 | IN | denotes | on |
T6043 | 101-102 | -COMMA- | denotes | , |
T6042 | 96-101 | NN | denotes | CtBP2 |
T6041 | 94-95 | -COMMA- | denotes | , |
T6040 | 82-94 | NN | denotes | co-repressor |
T6039 | 72-81 | VB | denotes | expressed |
T6038 | 65-71 | RB | denotes | widely |
T6037 | 63-64 | DT | denotes | a |
T6036 | 58-62 | IN | denotes | with |
T6035 | 49-57 | VB | denotes | interact |
T6034 | 46-48 | TO | denotes | to |
T6033 | 42-45 | CC | denotes | and |
T6032 | 32-41 | NN | denotes | repressor |
T6031 | 30-31 | DT | denotes | a |
T6030 | 27-29 | IN | denotes | as |
T6029 | 23-26 | VB | denotes | act |
T6028 | 20-22 | TO | denotes | to |
T6027 | 14-19 | VB | denotes | shown |
T6026 | 9-13 | VB | denotes | been |
T6025 | 5-8 | VB | denotes | has |
T6024 | 0-4 | NN | denotes | Sox6 |
R4172 | T6024 | T6025 | arg1Of | Sox6,has |
R4173 | T6024 | T6026 | arg1Of | Sox6,been |
R4174 | T6024 | T6027 | arg2Of | Sox6,shown |
R4175 | T6024 | T6029 | arg1Of | Sox6,act |
R4176 | T6024 | T6035 | arg1Of | Sox6,interact |
R4177 | T6027 | T6025 | arg2Of | shown,has |
R4178 | T6027 | T6026 | arg2Of | shown,been |
R4179 | T6027 | T6048 | arg1Of | shown,[ |
R4180 | T6029 | T6028 | arg1Of | act,to |
R4181 | T6029 | T6030 | arg1Of | act,as |
R4182 | T6029 | T6033 | arg1Of | act,and |
R4183 | T6032 | T6030 | arg2Of | repressor,as |
R4184 | T6032 | T6031 | arg1Of | repressor,a |
R4185 | T6033 | T6027 | arg3Of | and,shown |
R4186 | T6035 | T6033 | arg2Of | interact,and |
R4187 | T6035 | T6034 | arg1Of | interact,to |
R4188 | T6035 | T6036 | arg1Of | interact,with |
R4189 | T6039 | T6038 | arg1Of | expressed,widely |
R4190 | T6040 | T6036 | arg2Of | co-repressor,with |
R4191 | T6040 | T6037 | arg1Of | co-repressor,a |
R4192 | T6040 | T6039 | arg1Of | co-repressor,expressed |
R4193 | T6040 | T6041 | arg1Of | co-repressor,"," |
R4194 | T6040 | T6043 | arg1Of | co-repressor,"," |
R4195 | T6040 | T6044 | arg1Of | co-repressor,on |
R4196 | T6042 | T6041 | arg2Of | CtBP2,"," |
R4197 | T6047 | T6044 | arg2Of | promoter,on |
R4198 | T6047 | T6045 | arg1Of | promoter,the |
R4199 | T6047 | T6046 | arg1Of | promoter,fgf-3 |
R4200 | T6049 | T6048 | arg2Of | 5,[ |
R4201 | T6050 | T6048 | arg3Of | ],[ |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5677 | 110-115 | Protein | denotes | fgf-3 |
T5676 | 96-101 | Protein | denotes | CtBP2 |
T5675 | 0-4 | Protein | denotes | Sox6 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6216 | 96-101 | http://www.uniprot.org/uniprot/P56545 | denotes | CtBP2 |
T6207 | 0-4 | http://www.uniprot.org/uniprot/P35712 | denotes | Sox6 |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5599 | 0-129 | Sentence | denotes | Sox6 has been shown to act as a repressor and to interact with a widely expressed co-repressor, CtBP2, on the fgf-3 promoter [5]. |
T89 | 0-129 | Sentence | denotes | Sox6 has been shown to act as a repressor and to interact with a widely expressed co-repressor, CtBP2, on the fgf-3 promoter [5]. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5800 | 110-115 | Protein | denotes | fgf-3 |
T5799 | 96-101 | Protein | denotes | CtBP2 |
T5798 | 0-4 | Protein | denotes | Sox6 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6923 | 72-81 | Gene_expression | denotes | expressed |
T6922 | 49-57 | Binding | denotes | interact |
T6899 | 110-115 | Protein | denotes | fgf-3 |
T6898 | 96-101 | Protein | denotes | CtBP2 |
T6897 | 0-4 | Protein | denotes | Sox6 |
R4872 | T6898 | T6922 | themeOf | CtBP2,interact |
R4873 | T6898 | T6923 | themeOf | CtBP2,expressed |
R4874 | T6899 | T6922 | themeOf | fgf-3,interact |
R4875 | T6899 | T6923 | themeOf | fgf-3,expressed |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6260 | 72-81 | Gene_expression | denotes | expressed |
T6259 | 49-57 | Binding | denotes | interact |
T6238 | 110-115 | Protein | denotes | fgf-3 |
T6237 | 96-101 | Protein | denotes | CtBP2 |
T6236 | 0-4 | Protein | denotes | Sox6 |
R4362 | T6236 | T6259 | themeOf | Sox6,interact |
R4363 | T6236 | T6259 | themeOf | Sox6,interact |
R4364 | T6237 | T6259 | themeOf | CtBP2,interact |
R4365 | T6237 | T6260 | themeOf | CtBP2,expressed |
R4366 | T6238 | T6259 | themeOf | fgf-3,interact |
R4367 | T6238 | T6260 | themeOf | fgf-3,expressed |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6311 | 72-81 | Gene_expression | denotes | expressed |
T6310 | 49-57 | Binding | denotes | interact |
T6288 | 110-115 | Protein | denotes | fgf-3 |
T6287 | 96-101 | Protein | denotes | CtBP2 |
T6286 | 0-4 | Protein | denotes | Sox6 |
R4391 | T6286 | T6310 | themeOf | Sox6,interact |
R4392 | T6286 | T6310 | themeOf | Sox6,interact |
R4393 | T6287 | T6310 | themeOf | CtBP2,interact |
R4394 | T6287 | T6310 | themeOf | CtBP2,interact |
R4395 | T6288 | T6311 | themeOf | fgf-3,expressed |
R4396 | T6288 | T6310 | themeOf | fgf-3,interact |
R4397 | T6288 | T6310 | themeOf | fgf-3,interact |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6863 | 0-4 | Protein | denotes | Sox6 |
T6850 | 106-128 | Entity | denotes | the fgf-3 promoter [5] |
T6840 | 96-101 | Protein | denotes | CtBP2 |
T6829 | 106-128 | Protein | denotes | the fgf-3 promoter [5] |
R4858 | T6850 | T6829 | partOf | the fgf-3 promoter [5],the fgf-3 promoter [5] |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6604 | 128-129 | . | denotes | . |
T6603 | 127-128 | NNP | denotes | ] |
T6602 | 126-127 | CD | denotes | 5 |
T6601 | 125-126 | NN | denotes | [ |
T6600 | 116-124 | NN | denotes | promoter |
T6599 | 110-115 | JJ | denotes | fgf-3 |
T6598 | 106-109 | DT | denotes | the |
T6597 | 103-105 | IN | denotes | on |
T6596 | 101-102 | , | denotes | , |
T6595 | 96-101 | NNP | denotes | CtBP2 |
T6594 | 94-95 | , | denotes | , |
T6593 | 82-94 | NN | denotes | co-repressor |
T6592 | 72-81 | VBN | denotes | expressed |
T6591 | 65-71 | RB | denotes | widely |
T6590 | 63-64 | DT | denotes | a |
T6589 | 58-62 | IN | denotes | with |
T6588 | 49-57 | VB | denotes | interact |
T6587 | 46-48 | TO | denotes | to |
T6586 | 42-45 | CC | denotes | and |
T6585 | 32-41 | NN | denotes | repressor |
T6584 | 30-31 | DT | denotes | a |
T6583 | 27-29 | IN | denotes | as |
T6582 | 23-26 | VB | denotes | act |
T6581 | 20-22 | TO | denotes | to |
T6580 | 14-19 | VBN | denotes | shown |
T6579 | 9-13 | VBN | denotes | been |
T6578 | 5-8 | VBZ | denotes | has |
T6577 | 0-4 | NNP | denotes | Sox6 |
R4640 | T6577 | T6580 | nsubjpass | Sox6,shown |
R4641 | T6578 | T6580 | aux | has,shown |
R4642 | T6579 | T6580 | auxpass | been,shown |
R4643 | T6580 | T6580 | ROOT | shown,shown |
R4644 | T6581 | T6582 | aux | to,act |
R4645 | T6582 | T6580 | xcomp | act,shown |
R4646 | T6583 | T6582 | prep | as,act |
R4647 | T6584 | T6585 | det | a,repressor |
R4648 | T6585 | T6583 | pobj | repressor,as |
R4649 | T6586 | T6582 | cc | and,act |
R4650 | T6587 | T6588 | aux | to,interact |
R4651 | T6588 | T6582 | conj | interact,act |
R4652 | T6589 | T6588 | prep | with,interact |
R4653 | T6590 | T6593 | det | a,co-repressor |
R4654 | T6591 | T6592 | advmod | widely,expressed |
R4655 | T6592 | T6593 | amod | expressed,co-repressor |
R4656 | T6593 | T6589 | pobj | co-repressor,with |
R4657 | T6594 | T6593 | punct | ",",co-repressor |
R4658 | T6595 | T6593 | appos | CtBP2,co-repressor |
R4659 | T6596 | T6588 | punct | ",",interact |
R4660 | T6597 | T6588 | prep | on,interact |
R4661 | T6598 | T6600 | det | the,promoter |
R4662 | T6599 | T6600 | amod | fgf-3,promoter |
R4663 | T6600 | T6597 | pobj | promoter,on |
R4664 | T6601 | T6603 | nmod | [,] |
R4665 | T6602 | T6601 | nummod | 5,[ |
R4666 | T6603 | T6600 | appos | ],promoter |
R4667 | T6604 | T6580 | punct | .,shown |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5728 | 72-81 | Gene_expression | denotes | expressed |
T5727 | 49-57 | Binding | denotes | interact |
T5726 | 49-57 | Binding | denotes | interact |
T5725 | 110-128 | Protein | denotes | fgf-3 promoter [5] |
T5724 | 96-101 | Protein | denotes | CtBP2 |
T5723 | 0-4 | Protein | denotes | Sox6 |
R3947 | T5723 | T5726 | themeOf | Sox6,interact |
R3948 | T5723 | T5727 | themeOf | Sox6,interact |
R3949 | T5724 | T5726 | themeOf | CtBP2,interact |
R3950 | T5724 | T5728 | themeOf | CtBP2,expressed |
R3951 | T5725 | T5727 | themeOf | fgf-3 promoter [5],interact |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5510 | 49-57 | Binding | denotes | interact |
T5490 | 110-115 | Protein | denotes | fgf-3 |
T5489 | 96-101 | Protein | denotes | CtBP2 |
T5488 | 0-4 | Protein | denotes | Sox6 |
R3887 | T5488 | T5510 | themeOf | Sox6,interact |
R3888 | T5489 | T5510 | themeOf | CtBP2,interact |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5571 | 110-115 | Protein | denotes | fgf-3 |
T5570 | 96-101 | Protein | denotes | CtBP2 |
T5569 | 72-81 | Gene_expression | denotes | expressed |
T5568 | 0-4 | Protein | denotes | Sox6 |
T5535 | 110-115 | Protein | denotes | fgf-3 |
T5534 | 96-101 | Protein | denotes | CtBP2 |
T5533 | 0-4 | Protein | denotes | Sox6 |
R3903 | T5568 | T5569 | themeOf | Sox6,expressed |
R3904 | T5570 | T5568 | themeOf | CtBP2,Sox6 |
R3905 | T5570 | T5569 | themeOf | CtBP2,expressed |