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PMC:1359074 / 10923-11941 JSONTXT

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2_test

Id Subject Object Predicate Lexical cue
16462943-1848707-85760991 365-367 1848707 denotes 30
16462943-2748594-85760992 472-474 2748594 denotes 31
16462943-12677004-85760993 841-843 12677004 denotes 32
T87948 365-367 1848707 denotes 30
T97917 472-474 2748594 denotes 31
T50696 841-843 12677004 denotes 32

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T6023 1012-1017 NN denotes level
T6022 996-1011 JJ denotes transcriptional
T6021 992-995 DT denotes the
T6020 989-991 IN denotes at
T6019 980-988 NN denotes promoter
T6018 977-979 JJ denotes ɛy
T6017 973-976 DT denotes the
T6016 965-972 VB denotes repress
T6015 962-964 TO denotes to
T6014 957-961 VB denotes acts
T6013 952-956 NN denotes Sox6
T6012 947-951 IN denotes that
T6011 938-946 VB denotes indicate
T6010 933-937 NN denotes data
T6009 927-932 DT denotes These
T6008 924-925 -RRB- denotes )
T6007 922-924 NN denotes 2B
T6006 915-921 NN denotes Figure
T6005 914-915 -LRB- denotes (
T6004 905-913 NN denotes activity
T6003 899-904 NN denotes E-Luc
T6002 891-898 VB denotes repress
T6001 888-890 TO denotes to
T6000 882-887 VB denotes fails
T5999 880-881 -RRB- denotes )
T5998 874-880 NN denotes allele
T5997 868-873 NN denotes mouse
T5996 861-867 NN denotes p 100H
T5995 857-860 DT denotes the
T5994 854-856 TO denotes to
T5993 846-853 JJ denotes similar
T5992 845-846 -LRB- denotes (
T5991 843-844 -RRB- denotes ]
T5990 841-843 CD denotes 32
T5989 840-841 -LRB- denotes [
T5988 833-839 NN denotes domain
T5987 829-832 NN denotes HMG
T5986 825-828 PRP-DOLLAR- denotes its
T5985 819-824 VB denotes lacks
T5984 814-818 WDT denotes that
T5983 806-813 NN denotes protein
T5982 801-805 NN denotes Sox6
T5981 791-800 VB denotes truncated
T5980 789-790 DT denotes a
T5979 786-788 IN denotes of
T5978 771-785 NN denotes overexpression
T5977 769-770 -COMMA- denotes ,
T5976 761-769 NN denotes contrast
T5975 758-760 IN denotes In
T5974 755-756 -RRB- denotes )
T5973 753-755 NN denotes 2B
T5972 746-752 NN denotes Figure
T5971 745-746 -LRB- denotes (
T5970 736-744 NN denotes activity
T5969 727-735 NN denotes reporter
T5968 721-726 NN denotes E-Luc
T5967 718-720 IN denotes of
T5966 707-717 NN denotes repression
T5965 690-706 JJ denotes dosage-dependent
T5964 688-689 DT denotes a
T5963 685-687 TO denotes to
T5962 679-684 VB denotes leads
T5961 666-678 NN denotes transfection
T5960 656-665 JJ denotes transient
T5959 653-655 IN denotes by
T5958 647-652 NN denotes cells
T5957 641-646 NN denotes GM979
T5956 638-640 IN denotes in
T5955 633-637 NN denotes Sox6
T5954 630-632 IN denotes of
T5953 615-629 NN denotes Overexpression
T5952 612-613 -RRB- denotes )
T5951 605-612 NNP denotes Methods
T5950 601-604 CC denotes and
T5949 591-600 NNP denotes Materials
T5948 588-590 IN denotes in
T5947 579-587 VB denotes detailed
T5946 578-579 -LRB- denotes (
T5945 575-577 NN denotes 2A
T5944 568-574 NN denotes Figure
T5943 565-567 IN denotes in
T5942 559-564 VB denotes shown
T5941 556-558 IN denotes as
T5940 554-555 -COMMA- denotes ,
T5939 550-554 NN denotes gene
T5938 541-549 NN denotes reporter
T5937 530-540 NN denotes luciferase
T5936 526-529 DT denotes the
T5935 523-525 IN denotes by
T5934 514-522 VB denotes followed
T5933 512-513 -COMMA- denotes ,
T5932 511-512 -RRB- denotes )
T5931 509-511 NN denotes kb
T5930 505-508 CD denotes 2.2
T5929 504-505 -LRB- denotes (
T5928 495-503 NN denotes promoter
T5927 486-494 JJ denotes proximal
T5926 483-485 JJ denotes ɛy
T5925 479-482 DT denotes the
T5924 476-478 TO denotes to
T5923 474-475 -RRB- denotes ]
T5922 472-474 CD denotes 31
T5921 471-472 -LRB- denotes [
T5920 469-470 -RRB- denotes )
T5919 467-469 NN denotes kb
T5918 463-466 CD denotes 2.5
T5917 462-463 -LRB- denotes (
T5916 454-461 NN denotes element
T5915 452-453 -RRB- denotes )
T5914 448-452 NN denotes μLCR
T5913 447-448 -LRB- denotes (
T5912 437-446 NN denotes micro-LCR
T5911 435-436 DT denotes a
T5910 428-434 VB denotes fusing
T5909 425-427 IN denotes by
T5908 423-424 -RRB- denotes )
T5907 418-423 NN denotes E-Luc
T5906 417-418 -LRB- denotes (
T5905 407-416 NN denotes construct
T5904 398-406 NN denotes reporter
T5903 389-397 NN denotes promoter
T5902 386-388 JJ denotes ɛy
T5901 383-385 DT denotes an
T5900 373-382 VB denotes generated
T5899 370-372 PRP denotes We
T5898 367-368 -RRB- denotes ]
T5897 365-367 CD denotes 30
T5896 364-365 -LRB- denotes [
T5895 356-363 NN denotes globins
T5894 351-355 NN denotes beta
T5893 345-350 JJ denotes adult
T5892 341-344 CC denotes and
T5891 338-340 JJ denotes ɛy
T5890 333-337 CC denotes both
T5889 323-332 VB denotes expresses
T5888 318-322 WDT denotes that
T5887 313-317 NN denotes line
T5886 308-312 NN denotes cell
T5885 292-307 JJ denotes erythroleukemic
T5884 285-291 JJ denotes murine
T5883 283-284 DT denotes a
T5882 281-282 -COMMA- denotes ,
T5881 276-281 NN denotes cells
T5880 270-275 NN denotes GM979
T5879 266-269 CC denotes and
T5878 260-265 NN denotes assay
T5877 247-259 NN denotes transfection
T5876 237-246 JJ denotes transient
T5875 231-236 FW denotes vitro
T5874 228-230 FW denotes in
T5873 225-227 DT denotes an
T5872 220-224 VB denotes used
T5871 217-219 PRP denotes we
T5870 215-216 -COMMA- denotes ,
T5869 210-215 NN denotes level
T5868 194-209 JJ denotes transcriptional
T5867 190-193 DT denotes the
T5866 187-189 IN denotes at
T5865 178-186 NN denotes promoter
T5864 173-177 NN denotes gene
T5863 170-172 JJ denotes ɛy
T5862 166-169 DT denotes the
T5861 163-165 IN denotes on
T5860 158-162 VB denotes acts
T5859 149-157 RB denotes directly
T5858 144-148 NN denotes Sox6
T5857 136-143 IN denotes whether
T5856 124-135 VB denotes investigate
T5855 121-123 TO denotes To
T5854 111-119 NN denotes promoter
T5853 108-110 JJ denotes ɛy
T5852 104-107 DT denotes the
T5851 101-103 IN denotes of
T5850 92-100 NN denotes activity
T5849 76-91 JJ denotes transcriptional
T5848 72-75 RB denotes not
T5847 70-71 -COMMA- denotes ,
T5846 66-70 NN denotes mRNA
T5845 63-65 JJ denotes ɛy
T5844 60-62 IN denotes of
T5843 53-59 NN denotes levels
T5842 40-52 JJ denotes steady-state
T5841 32-39 NN denotes measure
T5840 30-31 -RRB- denotes )
T5839 29-30 CD denotes 1
T5838 22-28 NN denotes Figure
T5837 21-22 -LRB- denotes (
T5836 14-20 NN denotes assays
T5835 10-13 NN denotes PCR
T5834 0-9 JJ denotes Real-time
R3983 T5838 T5837 arg2Of Figure,(
R3984 T5838 T5839 arg1Of Figure,1
R3985 T5840 T5837 arg3Of ),(
R3986 T5843 T5834 arg1Of levels,Real-time
R3987 T5843 T5835 arg1Of levels,PCR
R3988 T5843 T5836 arg1Of levels,assays
R3989 T5843 T5837 arg1Of levels,(
R3990 T5843 T5841 arg1Of levels,measure
R3991 T5843 T5842 arg1Of levels,steady-state
R3992 T5843 T5844 arg1Of levels,of
R3993 T5846 T5844 arg2Of mRNA,of
R3994 T5846 T5845 arg1Of mRNA,ɛy
R3995 T5846 T5847 arg1Of mRNA,","
R3996 T5850 T5847 arg2Of activity,","
R3997 T5850 T5848 arg1Of activity,not
R3998 T5850 T5849 arg1Of activity,transcriptional
R3999 T5850 T5851 arg1Of activity,of
R4000 T5854 T5851 arg2Of promoter,of
R4001 T5854 T5852 arg1Of promoter,the
R4002 T5854 T5853 arg1Of promoter,ɛy
R4003 T5856 T5855 arg1Of investigate,To
R4004 T5858 T5860 arg1Of Sox6,acts
R4005 T5860 T5856 arg2Of acts,investigate
R4006 T5860 T5857 arg1Of acts,whether
R4007 T5860 T5859 arg1Of acts,directly
R4008 T5860 T5861 arg1Of acts,on
R4009 T5860 T5866 arg1Of acts,at
R4010 T5865 T5861 arg2Of promoter,on
R4011 T5865 T5862 arg1Of promoter,the
R4012 T5865 T5863 arg1Of promoter,ɛy
R4013 T5865 T5864 arg1Of promoter,gene
R4014 T5869 T5866 arg2Of level,at
R4015 T5869 T5867 arg1Of level,the
R4016 T5869 T5868 arg1Of level,transcriptional
R4017 T5871 T5856 arg1Of we,investigate
R4018 T5871 T5872 arg1Of we,used
R4019 T5872 T5855 modOf used,To
R4020 T5872 T5870 arg1Of used,","
R4021 T5875 T5874 arg1Of vitro,in
R4022 T5876 T5875 arg1Of transient,vitro
R4023 T5878 T5873 arg1Of assay,an
R4024 T5878 T5876 arg1Of assay,transient
R4025 T5878 T5877 arg1Of assay,transfection
R4026 T5878 T5879 arg1Of assay,and
R4027 T5879 T5872 arg2Of and,used
R4028 T5881 T5879 arg2Of cells,and
R4029 T5881 T5880 arg1Of cells,GM979
R4030 T5881 T5882 arg1Of cells,","
R4031 T5887 T5882 arg2Of line,","
R4032 T5887 T5883 arg1Of line,a
R4033 T5887 T5884 arg1Of line,murine
R4034 T5887 T5885 arg1Of line,erythroleukemic
R4035 T5887 T5886 arg1Of line,cell
R4036 T5887 T5888 arg1Of line,that
R4037 T5887 T5889 arg1Of line,expresses
R4038 T5891 T5892 arg1Of ɛy,and
R4039 T5893 T5892 arg2Of adult,and
R4040 T5895 T5889 arg2Of globins,expresses
R4041 T5895 T5890 arg1Of globins,both
R4042 T5895 T5891 arg1Of globins,ɛy
R4043 T5895 T5893 arg1Of globins,adult
R4044 T5895 T5894 arg1Of globins,beta
R4045 T5895 T5896 arg1Of globins,[
R4046 T5897 T5896 arg2Of 30,[
R4047 T5898 T5896 arg3Of ],[
R4048 T5899 T5900 arg1Of We,generated
R4049 T5899 T5910 arg1Of We,fusing
R4050 T5900 T5909 arg1Of generated,by
R4051 T5900 T5940 arg1Of generated,","
R4052 T5900 T5941 arg1Of generated,as
R4053 T5905 T5900 arg2Of construct,generated
R4054 T5905 T5901 arg1Of construct,an
R4055 T5905 T5902 arg1Of construct,ɛy
R4056 T5905 T5903 arg1Of construct,promoter
R4057 T5905 T5904 arg1Of construct,reporter
R4058 T5905 T5906 arg1Of construct,(
R4059 T5907 T5906 arg2Of E-Luc,(
R4060 T5908 T5906 arg3Of ),(
R4061 T5910 T5909 arg2Of fusing,by
R4062 T5910 T5933 arg1Of fusing,","
R4063 T5910 T5934 modOf fusing,followed
R4064 T5914 T5913 arg2Of μLCR,(
R4065 T5915 T5913 arg3Of ),(
R4066 T5916 T5910 arg2Of element,fusing
R4067 T5916 T5911 arg1Of element,a
R4068 T5916 T5912 arg1Of element,micro-LCR
R4069 T5916 T5913 arg1Of element,(
R4070 T5916 T5917 arg1Of element,(
R4071 T5916 T5921 arg1Of element,[
R4072 T5916 T5924 arg1Of element,to
R4073 T5919 T5917 arg2Of kb,(
R4074 T5919 T5918 arg1Of kb,2.5
R4075 T5920 T5917 arg3Of ),(
R4076 T5922 T5921 arg2Of 31,[
R4077 T5923 T5921 arg3Of ],[
R4078 T5928 T5924 arg2Of promoter,to
R4079 T5928 T5925 arg1Of promoter,the
R4080 T5928 T5926 arg1Of promoter,ɛy
R4081 T5928 T5927 arg1Of promoter,proximal
R4082 T5928 T5929 arg1Of promoter,(
R4083 T5931 T5929 arg2Of kb,(
R4084 T5931 T5930 arg1Of kb,2.2
R4085 T5932 T5929 arg3Of ),(
R4086 T5939 T5934 arg1Of gene,followed
R4087 T5939 T5935 arg2Of gene,by
R4088 T5939 T5936 arg1Of gene,the
R4089 T5939 T5937 arg1Of gene,luciferase
R4090 T5939 T5938 arg1Of gene,reporter
R4091 T5942 T5941 arg2Of shown,as
R4092 T5942 T5943 arg1Of shown,in
R4093 T5945 T5943 arg2Of 2A,in
R4094 T5945 T5944 arg1Of 2A,Figure
R4095 T5945 T5946 arg1Of 2A,(
R4096 T5947 T5946 arg2Of detailed,(
R4097 T5947 T5948 arg1Of detailed,in
R4098 T5949 T5950 arg1Of Materials,and
R4099 T5950 T5948 arg2Of and,in
R4100 T5951 T5950 arg2Of Methods,and
R4101 T5952 T5946 arg3Of ),(
R4102 T5953 T5954 arg1Of Overexpression,of
R4103 T5953 T5956 arg1Of Overexpression,in
R4104 T5953 T5959 arg1Of Overexpression,by
R4105 T5953 T5962 arg1Of Overexpression,leads
R4106 T5955 T5954 arg2Of Sox6,of
R4107 T5958 T5956 arg2Of cells,in
R4108 T5958 T5957 arg1Of cells,GM979
R4109 T5961 T5959 arg2Of transfection,by
R4110 T5961 T5960 arg1Of transfection,transient
R4111 T5962 T5963 arg1Of leads,to
R4112 T5966 T5963 arg2Of repression,to
R4113 T5966 T5964 arg1Of repression,a
R4114 T5966 T5965 arg1Of repression,dosage-dependent
R4115 T5966 T5967 arg1Of repression,of
R4116 T5970 T5967 arg2Of activity,of
R4117 T5970 T5968 arg1Of activity,E-Luc
R4118 T5970 T5969 arg1Of activity,reporter
R4119 T5970 T5971 arg1Of activity,(
R4120 T5973 T5971 arg2Of 2B,(
R4121 T5973 T5972 arg1Of 2B,Figure
R4122 T5974 T5971 arg3Of ),(
R4123 T5976 T5975 arg2Of contrast,In
R4124 T5978 T5979 arg1Of overexpression,of
R4125 T5978 T6000 arg1Of overexpression,fails
R4126 T5978 T6002 arg1Of overexpression,repress
R4127 T5983 T5979 arg2Of protein,of
R4128 T5983 T5980 arg1Of protein,a
R4129 T5983 T5981 arg2Of protein,truncated
R4130 T5983 T5982 arg1Of protein,Sox6
R4131 T5983 T5984 arg1Of protein,that
R4132 T5983 T5985 arg1Of protein,lacks
R4133 T5983 T5992 arg1Of protein,(
R4134 T5985 T5989 arg1Of lacks,[
R4135 T5988 T5985 arg2Of domain,lacks
R4136 T5988 T5986 arg1Of domain,its
R4137 T5988 T5987 arg1Of domain,HMG
R4138 T5990 T5989 arg2Of 32,[
R4139 T5991 T5989 arg3Of ],[
R4140 T5993 T5992 arg2Of similar,(
R4141 T5993 T5994 arg1Of similar,to
R4142 T5998 T5994 arg2Of allele,to
R4143 T5998 T5995 arg1Of allele,the
R4144 T5998 T5996 arg1Of allele,p 100H
R4145 T5998 T5997 arg1Of allele,mouse
R4146 T5999 T5992 arg3Of ),(
R4147 T6000 T5975 arg1Of fails,In
R4148 T6000 T5977 arg1Of fails,","
R4149 T6002 T6000 arg2Of repress,fails
R4150 T6002 T6001 arg1Of repress,to
R4151 T6004 T6002 arg2Of activity,repress
R4152 T6004 T6003 arg1Of activity,E-Luc
R4153 T6004 T6005 arg1Of activity,(
R4154 T6007 T6005 arg2Of 2B,(
R4155 T6007 T6006 arg1Of 2B,Figure
R4156 T6008 T6005 arg3Of ),(
R4157 T6010 T6009 arg1Of data,These
R4158 T6010 T6011 arg1Of data,indicate
R4159 T6013 T6014 arg1Of Sox6,acts
R4160 T6013 T6016 arg1Of Sox6,repress
R4161 T6014 T6011 arg2Of acts,indicate
R4162 T6014 T6012 arg1Of acts,that
R4163 T6016 T6014 arg2Of repress,acts
R4164 T6016 T6015 arg1Of repress,to
R4165 T6016 T6020 arg1Of repress,at
R4166 T6019 T6016 arg2Of promoter,repress
R4167 T6019 T6017 arg1Of promoter,the
R4168 T6019 T6018 arg1Of promoter,ɛy
R4169 T6023 T6020 arg2Of level,at
R4170 T6023 T6021 arg1Of level,the
R4171 T6023 T6022 arg1Of level,transcriptional

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T5674 977-979 Protein denotes ɛy
T5673 952-956 Protein denotes Sox6
T5672 801-805 Protein denotes Sox6
T5671 633-637 Protein denotes Sox6
T5670 530-540 Protein denotes luciferase
T5669 483-485 Protein denotes ɛy
T5668 386-388 Protein denotes ɛy
T5667 351-363 Protein denotes beta globins
T5666 338-340 Protein denotes ɛy
T5665 170-172 Protein denotes ɛy
T5664 144-148 Protein denotes Sox6
T5663 108-110 Protein denotes ɛy
T5662 63-65 Protein denotes ɛy

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6206 952-956 http://www.uniprot.org/uniprot/P35712 denotes Sox6
T6205 801-805 http://www.uniprot.org/uniprot/P35712 denotes Sox6
T6204 633-637 http://www.uniprot.org/uniprot/P35712 denotes Sox6
T6203 144-148 http://www.uniprot.org/uniprot/P35712 denotes Sox6
T6215 530-540 http://www.uniprot.org/uniprot/P08659 denotes luciferase

GO-BP

Id Subject Object Predicate Lexical cue
T5610 356-363 http://purl.obolibrary.org/obo/GO_0005344 denotes globins
T5609 996-1011 http://purl.obolibrary.org/obo/GO_0006351 denotes transcriptional
T5608 194-209 http://purl.obolibrary.org/obo/GO_0006351 denotes transcriptional
T5607 76-91 http://purl.obolibrary.org/obo/GO_0006351 denotes transcriptional
T5606 66-91 http://purl.obolibrary.org/obo/GO_0009299 denotes mRNA, not transcriptional

GO-MF

Id Subject Object Predicate Lexical cue
T5693 356-363 http://purl.obolibrary.org/obo/GO_0005344 denotes globins

GO-CC

Id Subject Object Predicate Lexical cue
T5699 647-652 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5698 276-281 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T5598 927-1018 Sentence denotes These data indicate that Sox6 acts to repress the ɛy promoter at the transcriptional level.
T5597 758-926 Sentence denotes In contrast, overexpression of a truncated Sox6 protein that lacks its HMG domain [32] (similar to the p 100H mouse allele) fails to repress E-Luc activity (Figure 2B).
T5596 615-757 Sentence denotes Overexpression of Sox6 in GM979 cells by transient transfection leads to a dosage-dependent repression of E-Luc reporter activity (Figure 2B).
T5595 370-614 Sentence denotes We generated an ɛy promoter reporter construct (E-Luc) by fusing a micro-LCR (μLCR) element (2.5 kb) [31] to the ɛy proximal promoter (2.2 kb), followed by the luciferase reporter gene, as shown in Figure 2A (detailed in Materials and Methods).
T5594 121-369 Sentence denotes To investigate whether Sox6 directly acts on the ɛy gene promoter at the transcriptional level, we used an in vitro transient transfection assay and GM979 cells, a murine erythroleukemic cell line that expresses both ɛy and adult beta globins [30].
T5593 0-120 Sentence denotes Real-time PCR assays (Figure 1) measure steady-state levels of ɛy mRNA, not transcriptional activity of the ɛy promoter.
T73 0-120 Sentence denotes Real-time PCR assays (Figure 1) measure steady-state levels of ɛy mRNA, not transcriptional activity of the ɛy promoter.
T74 121-369 Sentence denotes To investigate whether Sox6 directly acts on the ɛy gene promoter at the transcriptional level, we used an in vitro transient transfection assay and GM979 cells, a murine erythroleukemic cell line that expresses both ɛy and adult beta globins [30].
T75 370-614 Sentence denotes We generated an ɛy promoter reporter construct (E-Luc) by fusing a micro-LCR (μLCR) element (2.5 kb) [31] to the ɛy proximal promoter (2.2 kb), followed by the luciferase reporter gene, as shown in Figure 2A (detailed in Materials and Methods).
T76 615-757 Sentence denotes Overexpression of Sox6 in GM979 cells by transient transfection leads to a dosage-dependent repression of E-Luc reporter activity (Figure 2B).
T77 758-926 Sentence denotes In contrast, overexpression of a truncated Sox6 protein that lacks its HMG domain [32] (similar to the p 100H mouse allele) fails to repress E-Luc activity (Figure 2B).
T78 927-1018 Sentence denotes These data indicate that Sox6 acts to repress the ɛy promoter at the transcriptional level.

simple1

Id Subject Object Predicate Lexical cue
T5797 977-979 Protein denotes ɛy
T5796 952-956 Protein denotes Sox6
T5795 801-805 Protein denotes Sox6
T5794 633-637 Protein denotes Sox6
T5793 530-540 Protein denotes luciferase
T5792 483-485 Protein denotes ɛy
T5791 386-388 Protein denotes ɛy
T5790 351-363 Protein denotes beta globins
T5789 338-340 Protein denotes ɛy
T5788 170-172 Protein denotes ɛy
T5787 144-148 Protein denotes Sox6
T5786 108-110 Protein denotes ɛy
T5785 63-65 Protein denotes ɛy

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T6921 965-972 Negative_regulation denotes repress
T6920 771-785 Gene_expression denotes overexpression
T6919 771-785 Positive_regulation denotes overexpression
T6918 615-629 Positive_regulation denotes Overexpression
T6917 615-629 Gene_expression denotes Overexpression
T6916 158-162 Positive_regulation denotes acts
T6915 323-332 Gene_expression denotes expresses
T6896 977-979 Protein denotes ɛy
T6895 952-956 Protein denotes Sox6
T6894 801-805 Protein denotes Sox6
T6893 633-637 Protein denotes Sox6
T6892 386-388 Protein denotes ɛy
T6891 530-540 Protein denotes luciferase
T6890 483-485 Protein denotes ɛy
T6889 351-363 Protein denotes beta globins
T6888 338-340 Protein denotes ɛy
T6887 170-172 Protein denotes ɛy
T6886 144-148 Protein denotes Sox6
T6885 108-110 Protein denotes ɛy
T6884 63-65 Protein denotes ɛy
R4864 T6886 T6916 causeOf Sox6,acts
R4865 T6887 T6916 themeOf ɛy,acts
R4866 T6888 T6915 themeOf ɛy,expresses
R4867 T6889 T6915 themeOf beta globins,expresses
R4868 T6893 T6917 themeOf Sox6,Overexpression
R4869 T6894 T6920 themeOf Sox6,overexpression
R4870 T6895 T6921 causeOf Sox6,repress
R4871 T6896 T6921 themeOf ɛy,repress
R4887 T6917 T6918 themeOf Overexpression,Overexpression
R4888 T6920 T6919 themeOf overexpression,overexpression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6258 965-972 Negative_regulation denotes repress
T6257 771-785 Positive_regulation denotes overexpression
T6256 615-629 Positive_regulation denotes Overexpression
T6255 158-162 Binding denotes acts
T6254 323-332 Gene_expression denotes expresses
T6228 351-363 Protein denotes beta globins
T6227 338-340 Protein denotes ɛy
T6226 170-172 Protein denotes ɛy
T6225 144-148 Protein denotes Sox6
T6224 108-110 Protein denotes ɛy
T6223 63-65 Protein denotes ɛy
T6235 977-979 Protein denotes ɛy
T6234 952-956 Protein denotes Sox6
T6233 801-805 Protein denotes Sox6
T6232 633-637 Protein denotes Sox6
T6231 386-388 Protein denotes ɛy
T6230 530-540 Protein denotes luciferase
T6229 483-485 Protein denotes ɛy
R4356 T6225 T6255 themeOf Sox6,acts
R4357 T6227 T6254 themeOf ɛy,expresses
R4358 T6232 T6256 themeOf Sox6,Overexpression
R4359 T6233 T6257 themeOf Sox6,overexpression
R4360 T6234 T6258 causeOf Sox6,repress
R4361 T6235 T6258 themeOf ɛy,repress

DLUT931

Id Subject Object Predicate Lexical cue
T6309 965-972 Negative_regulation denotes repress
T6308 771-785 Positive_regulation denotes overexpression
T6307 615-629 Positive_regulation denotes Overexpression
T6306 323-332 Gene_expression denotes expresses
T6305 158-162 Positive_regulation denotes acts
T6285 977-979 Protein denotes ɛy
T6284 952-956 Protein denotes Sox6
T6283 801-805 Protein denotes Sox6
T6282 633-637 Protein denotes Sox6
T6281 386-388 Protein denotes ɛy
T6280 530-540 Protein denotes luciferase
T6279 483-485 Protein denotes ɛy
T6278 351-363 Protein denotes beta globins
T6277 338-340 Protein denotes ɛy
T6276 170-172 Protein denotes ɛy
T6275 144-148 Protein denotes Sox6
T6274 108-110 Protein denotes ɛy
T6273 63-65 Protein denotes ɛy
R4383 T6275 T6305 causeOf Sox6,acts
R4384 T6276 T6305 themeOf ɛy,acts
R4385 T6277 T6306 themeOf ɛy,expresses
R4386 T6278 T6306 themeOf beta globins,expresses
R4387 T6282 T6307 themeOf Sox6,Overexpression
R4388 T6283 T6308 themeOf Sox6,overexpression
R4389 T6284 T6309 causeOf Sox6,repress
R4390 T6285 T6309 themeOf ɛy,repress

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T6879 615-678 Gene_expression denotes Overexpression of Sox6 in GM979 cells by transient transfection
T6878 615-678 Positive_regulation denotes Overexpression of Sox6 in GM979 cells by transient transfection
T6874 101-119 Entity denotes of the ɛy promoter
T6872 825-844 Entity denotes its HMG domain [32]
T6869 345-368 Protein denotes adult beta globins [30]
T6867 166-186 Entity denotes the ɛy gene promoter
T6865 523-555 Protein denotes by the luciferase reporter gene,
T6861 383-406 Entity denotes an ɛy promoter reporter
T6859 448-452 Protein denotes μLCR
T6858 761-813 Protein denotes contrast, overexpression of a truncated Sox6 protein
T6857 63-71 Protein denotes ɛy mRNA,
T6856 977-979 Protein denotes ɛy
T6854 270-282 Entity denotes GM979 cells,
T6852 479-512 Entity denotes the ɛy proximal promoter (2.2 kb)
T6851 973-988 Entity denotes the ɛy promoter
T6849 483-485 Protein denotes ɛy
T6847 386-388 Protein denotes ɛy
T6845 854-880 Protein denotes to the p 100H mouse allele
T6844 10-13 Protein denotes PCR
T6843 952-956 Protein denotes Sox6
T6839 630-637 Protein denotes of Sox6
T6830 166-186 Protein denotes the ɛy gene promoter
T6828 530-540 Protein denotes luciferase
T6827 108-110 Protein denotes ɛy
T6824 144-148 Protein denotes Sox6
T6823 63-65 Protein denotes ɛy
T6818 338-340 Protein denotes ɛy
T6817 801-805 Protein denotes Sox6
T6816 170-172 Protein denotes ɛy
T6814 641-678 Entity denotes GM979 cells by transient transfection
R4855 T6839 T6878 themeOf of Sox6,Overexpression of Sox6 in GM979 cells by transient transfection
R4856 T6839 T6879 themeOf of Sox6,Overexpression of Sox6 in GM979 cells by transient transfection
R4859 T6851 T6856 partOf the ɛy promoter,ɛy
R4860 T6852 T6849 partOf the ɛy proximal promoter (2.2 kb),ɛy
R4862 T6874 T6827 partOf of the ɛy promoter,ɛy

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6576 1017-1018 . denotes .
T6575 1012-1017 NN denotes level
T6574 996-1011 JJ denotes transcriptional
T6573 992-995 DT denotes the
T6572 989-991 IN denotes at
T6571 980-988 NN denotes promoter
T6570 977-979 JJ denotes ɛy
T6569 973-976 DT denotes the
T6447 368-369 . denotes .
T6446 367-368 NNP denotes ]
T6445 365-367 CD denotes 30
T6444 364-365 NNP denotes [
T6443 356-363 NNS denotes globins
T6442 351-355 JJ denotes beta
T6441 345-350 NN denotes adult
T6440 341-344 CC denotes and
T6439 338-340 NN denotes ɛy
T6438 333-337 DT denotes both
T6437 323-332 VBZ denotes expresses
T6436 318-322 WDT denotes that
T6435 313-317 NN denotes line
T6434 308-312 NN denotes cell
T6433 292-307 JJ denotes erythroleukemic
T6432 285-291 JJ denotes murine
T6431 283-284 DT denotes a
T6430 281-282 , denotes ,
T6429 276-281 NNS denotes cells
T6428 270-275 NNP denotes GM979
T6427 266-269 CC denotes and
T6426 260-265 NN denotes assay
T6425 247-259 NN denotes transfection
T6424 237-246 NN denotes transient
T6423 231-236 NN denotes vitro
T6422 228-230 IN denotes in
T6421 225-227 DT denotes an
T6420 220-224 VBD denotes used
T6419 217-219 PRP denotes we
T6418 215-216 , denotes ,
T6417 210-215 NN denotes level
T6416 194-209 JJ denotes transcriptional
T6415 190-193 DT denotes the
T6414 187-189 IN denotes at
T6413 178-186 NN denotes promoter
T6412 173-177 NN denotes gene
T6411 170-172 JJ denotes ɛy
T6410 166-169 DT denotes the
T6409 163-165 IN denotes on
T6408 158-162 VBZ denotes acts
T6407 149-157 RB denotes directly
T6406 144-148 JJ denotes Sox6
T6405 136-143 IN denotes whether
T6404 124-135 VB denotes investigate
T6403 121-123 TO denotes To
T6402 119-120 . denotes .
T6401 111-119 NN denotes promoter
T6400 108-110 JJ denotes ɛy
T6399 104-107 DT denotes the
T6398 101-103 IN denotes of
T6397 92-100 NN denotes activity
T6396 76-91 JJ denotes transcriptional
T6395 72-75 RB denotes not
T6394 70-71 , denotes ,
T6393 66-70 NNP denotes mRNA
T6392 63-65 JJ denotes ɛy
T6391 60-62 IN denotes of
T6390 53-59 NNS denotes levels
T6389 40-52 JJ denotes steady-state
T6388 32-39 NN denotes measure
T6387 30-31 -RRB- denotes )
T6386 29-30 CD denotes 1
T6385 22-28 NN denotes Figure
T6384 21-22 -LRB- denotes (
T6383 14-20 NNS denotes assays
T6382 10-13 NNP denotes PCR
T6381 0-9 JJ denotes Real-time
T6568 965-972 VB denotes repress
T6567 962-964 TO denotes to
T6566 957-961 NNS denotes acts
T6565 952-956 JJ denotes Sox6
T6564 947-951 IN denotes that
T6563 938-946 VBP denotes indicate
T6562 933-937 NNS denotes data
T6561 927-932 DT denotes These
T6560 925-926 . denotes .
T6559 924-925 -RRB- denotes )
T6558 922-924 NN denotes 2B
T6557 915-921 NN denotes Figure
T6556 914-915 -LRB- denotes (
T6555 905-913 NN denotes activity
T6554 899-904 JJ denotes E-Luc
T6553 891-898 VB denotes repress
T6552 888-890 TO denotes to
T6551 882-887 VBZ denotes fails
T6550 880-881 -RRB- denotes )
T6549 874-880 NN denotes allele
T6548 868-873 NN denotes mouse
T6547 861-867 JJ denotes p 100H
T6546 857-860 DT denotes the
T6545 854-856 TO denotes to
T6544 846-853 JJ denotes similar
T6543 845-846 -LRB- denotes (
T6542 843-844 NNP denotes ]
T6541 841-843 CD denotes 32
T6540 840-841 NNP denotes [
T6539 833-839 NN denotes domain
T6538 829-832 NNP denotes HMG
T6537 825-828 PRP$ denotes its
T6536 819-824 VBZ denotes lacks
T6535 814-818 WDT denotes that
T6534 806-813 NN denotes protein
T6533 801-805 NNP denotes Sox6
T6532 791-800 VBN denotes truncated
T6531 789-790 DT denotes a
T6530 786-788 IN denotes of
T6529 771-785 NN denotes overexpression
T6528 769-770 , denotes ,
T6527 761-769 NN denotes contrast
T6526 758-760 IN denotes In
T6525 756-757 . denotes .
T6524 755-756 -RRB- denotes )
T6523 753-755 NN denotes 2B
T6522 746-752 NN denotes Figure
T6521 745-746 -LRB- denotes (
T6520 736-744 NN denotes activity
T6519 727-735 NN denotes reporter
T6518 721-726 JJ denotes E-Luc
T6517 718-720 IN denotes of
T6516 707-717 NN denotes repression
T6515 690-706 JJ denotes dosage-dependent
T6514 688-689 DT denotes a
T6513 685-687 TO denotes to
T6512 679-684 VBZ denotes leads
T6511 666-678 NN denotes transfection
T6510 656-665 JJ denotes transient
T6509 653-655 IN denotes by
T6508 647-652 NNS denotes cells
T6507 641-646 NNP denotes GM979
T6506 638-640 IN denotes in
T6505 633-637 NNP denotes Sox6
T6504 630-632 IN denotes of
T6503 615-629 NNP denotes Overexpression
T6502 613-614 . denotes .
T6501 612-613 -RRB- denotes )
T6500 605-612 NNPS denotes Methods
T6499 601-604 CC denotes and
T6498 591-600 NNPS denotes Materials
T6497 588-590 IN denotes in
T6496 579-587 VBN denotes detailed
T6495 578-579 -LRB- denotes (
T6494 575-577 CD denotes 2A
T6493 568-574 NN denotes Figure
T6492 565-567 IN denotes in
T6491 559-564 VBN denotes shown
T6490 556-558 IN denotes as
T6489 554-555 , denotes ,
T6488 550-554 NN denotes gene
T6487 541-549 NN denotes reporter
T6486 530-540 NN denotes luciferase
T6485 526-529 DT denotes the
T6484 523-525 IN denotes by
T6483 514-522 VBN denotes followed
T6482 512-513 , denotes ,
T6481 511-512 -RRB- denotes )
T6480 509-511 NN denotes kb
T6479 505-508 CD denotes 2.2
T6478 504-505 -LRB- denotes (
T6477 495-503 NN denotes promoter
T6476 486-494 JJ denotes proximal
T6475 483-485 JJ denotes ɛy
T6474 479-482 DT denotes the
T6473 476-478 TO denotes to
T6472 474-475 NNP denotes ]
T6471 472-474 CD denotes 31
T6470 471-472 NNP denotes [
T6469 469-470 -RRB- denotes )
T6468 467-469 NN denotes kb
T6467 463-466 CD denotes 2.5
T6466 462-463 -LRB- denotes (
T6465 454-461 NN denotes element
T6464 452-453 -RRB- denotes )
T6463 448-452 NNP denotes μLCR
T6462 447-448 -LRB- denotes (
T6461 437-446 NN denotes micro-LCR
T6460 435-436 DT denotes a
T6459 428-434 NN denotes fusing
T6458 425-427 IN denotes by
T6457 423-424 -RRB- denotes )
T6456 418-423 JJ denotes E-Luc
T6455 417-418 -LRB- denotes (
T6454 407-416 VBP denotes construct
T6453 398-406 NN denotes reporter
T6452 389-397 NN denotes promoter
T6451 386-388 JJ denotes ɛy
T6450 383-385 DT denotes an
T6449 373-382 VBD denotes generated
T6448 370-372 PRP denotes We
R4444 T6381 T6383 amod Real-time,assays
R4445 T6382 T6383 compound PCR,assays
R4447 T6384 T6383 punct (,assays
R4448 T6385 T6383 appos Figure,assays
R4449 T6386 T6385 nummod 1,Figure
R4450 T6387 T6385 punct ),Figure
R4451 T6388 T6397 nmod measure,activity
R4452 T6389 T6390 amod steady-state,levels
R4453 T6390 T6388 dobj levels,measure
R4454 T6391 T6390 prep of,levels
R4455 T6392 T6393 compound ɛy,mRNA
R4456 T6393 T6391 pobj mRNA,of
R4457 T6394 T6393 punct ",",mRNA
R4458 T6395 T6397 neg not,activity
R4459 T6396 T6397 amod transcriptional,activity
R4460 T6397 T6383 appos activity,assays
R4461 T6398 T6397 prep of,activity
R4462 T6399 T6401 det the,promoter
R4463 T6400 T6401 amod ɛy,promoter
R4464 T6401 T6398 pobj promoter,of
R4466 T6403 T6404 aux To,investigate
R4467 T6404 T6420 advcl investigate,used
R4468 T6405 T6408 mark whether,acts
R4469 T6406 T6408 nsubj Sox6,acts
R4470 T6407 T6408 advmod directly,acts
R4471 T6408 T6404 ccomp acts,investigate
R4472 T6409 T6408 prep on,acts
R4473 T6410 T6413 det the,promoter
R4474 T6411 T6413 amod ɛy,promoter
R4475 T6412 T6413 compound gene,promoter
R4476 T6413 T6409 pobj promoter,on
R4477 T6414 T6413 prep at,promoter
R4478 T6415 T6417 det the,level
R4479 T6416 T6417 amod transcriptional,level
R4480 T6417 T6414 pobj level,at
R4481 T6418 T6420 punct ",",used
R4482 T6419 T6420 nsubj we,used
R4483 T6420 T6420 ROOT used,used
R4484 T6421 T6426 det an,assay
R4485 T6422 T6426 nmod in,assay
R4486 T6423 T6426 amod vitro,assay
R4487 T6424 T6426 nmod transient,assay
R4488 T6425 T6426 compound transfection,assay
R4489 T6426 T6420 dobj assay,used
R4490 T6427 T6426 cc and,assay
R4491 T6428 T6429 compound GM979,cells
R4492 T6429 T6426 conj cells,assay
R4493 T6430 T6420 punct ",",used
R4494 T6431 T6435 det a,line
R4495 T6432 T6435 amod murine,line
R4496 T6433 T6435 amod erythroleukemic,line
R4497 T6434 T6435 compound cell,line
R4498 T6435 T6420 dobj line,used
R4499 T6436 T6437 nsubj that,expresses
R4500 T6437 T6435 relcl expresses,line
R4501 T6438 T6439 det both,ɛy
R4502 T6439 T6437 dobj ɛy,expresses
R4503 T6440 T6439 cc and,ɛy
R4504 T6441 T6443 amod adult,globins
R4505 T6442 T6443 compound beta,globins
R4506 T6443 T6446 dep globins,]
R4507 T6444 T6446 nmod [,]
R4508 T6445 T6446 nummod 30,]
R4509 T6446 T6439 conj ],ɛy
R4510 T6447 T6420 punct .,used
R4511 T6448 T6449 nsubj We,generated
R4512 T6449 T6449 ROOT generated,generated
R4513 T6450 T6453 det an,reporter
R4514 T6451 T6453 amod ɛy,reporter
R4515 T6452 T6453 compound promoter,reporter
R4516 T6453 T6454 nsubj reporter,construct
R4517 T6454 T6449 ccomp construct,generated
R4518 T6455 T6456 punct (,E-Luc
R4519 T6456 T6454 dep E-Luc,construct
R4520 T6457 T6456 punct ),E-Luc
R4521 T6458 T6454 prep by,construct
R4522 T6459 T6458 pcomp fusing,by
R4523 T6460 T6461 det a,micro-LCR
R4524 T6461 T6459 dobj micro-LCR,fusing
R4525 T6462 T6463 punct (,μLCR
R4526 T6463 T6461 appos μLCR,micro-LCR
R4527 T6464 T6463 punct ),μLCR
R4528 T6465 T6461 conj element,micro-LCR
R4529 T6466 T6465 punct (,element
R4530 T6467 T6468 nummod 2.5,kb
R4531 T6468 T6465 appos kb,element
R4532 T6469 T6465 punct ),element
R4533 T6470 T6472 nmod [,]
R4534 T6471 T6472 nummod 31,]
R4535 T6472 T6461 appos ],micro-LCR
R4536 T6473 T6459 prep to,fusing
R4537 T6474 T6477 det the,promoter
R4538 T6475 T6477 amod ɛy,promoter
R4539 T6476 T6477 amod proximal,promoter
R4540 T6477 T6473 pobj promoter,to
R4541 T6478 T6477 punct (,promoter
R4542 T6479 T6480 nummod 2.2,kb
R4543 T6480 T6477 appos kb,promoter
R4544 T6481 T6477 punct ),promoter
R4545 T6482 T6459 punct ",",fusing
R4546 T6483 T6454 advcl followed,construct
R4547 T6484 T6483 agent by,followed
R4548 T6485 T6488 det the,gene
R4549 T6486 T6488 compound luciferase,gene
R4550 T6487 T6488 compound reporter,gene
R4551 T6488 T6484 pobj gene,by
R4552 T6489 T6483 punct ",",followed
R4553 T6490 T6491 mark as,shown
R4554 T6491 T6454 advcl shown,construct
R4555 T6492 T6491 prep in,shown
R4556 T6493 T6492 pobj Figure,in
R4557 T6494 T6493 nummod 2A,Figure
R4558 T6495 T6496 punct (,detailed
R4559 T6496 T6454 advcl detailed,construct
R4560 T6497 T6496 prep in,detailed
R4561 T6498 T6497 pobj Materials,in
R4562 T6499 T6498 cc and,Materials
R4563 T6500 T6498 conj Methods,Materials
R4564 T6501 T6496 punct ),detailed
R4565 T6502 T6449 punct .,generated
R4566 T6503 T6512 nsubj Overexpression,leads
R4567 T6504 T6503 prep of,Overexpression
R4568 T6505 T6504 pobj Sox6,of
R4569 T6506 T6503 prep in,Overexpression
R4570 T6507 T6508 compound GM979,cells
R4571 T6508 T6506 pobj cells,in
R4572 T6509 T6503 agent by,Overexpression
R4573 T6510 T6511 amod transient,transfection
R4574 T6511 T6509 pobj transfection,by
R4575 T6512 T6512 ROOT leads,leads
R4576 T6513 T6512 prep to,leads
R4577 T6514 T6516 det a,repression
R4578 T6515 T6516 amod dosage-dependent,repression
R4579 T6516 T6513 pobj repression,to
R4580 T6517 T6516 prep of,repression
R4581 T6518 T6520 amod E-Luc,activity
R4582 T6519 T6520 compound reporter,activity
R4583 T6520 T6517 pobj activity,of
R4584 T6521 T6523 punct (,2B
R4585 T6522 T6523 compound Figure,2B
R4586 T6523 T6520 appos 2B,activity
R4587 T6524 T6520 punct ),activity
R4588 T6525 T6512 punct .,leads
R4589 T6526 T6551 prep In,fails
R4590 T6527 T6526 pobj contrast,In
R4591 T6528 T6551 punct ",",fails
R4592 T6529 T6551 nsubj overexpression,fails
R4593 T6530 T6529 prep of,overexpression
R4594 T6531 T6534 det a,protein
R4595 T6532 T6534 amod truncated,protein
R4596 T6533 T6534 compound Sox6,protein
R4597 T6534 T6530 pobj protein,of
R4598 T6535 T6536 nsubj that,lacks
R4599 T6536 T6534 relcl lacks,protein
R4600 T6537 T6539 poss its,domain
R4601 T6538 T6539 compound HMG,domain
R4602 T6539 T6536 dobj domain,lacks
R4603 T6540 T6542 nmod [,]
R4604 T6541 T6542 nummod 32,]
R4605 T6542 T6539 appos ],domain
R4606 T6543 T6542 punct (,]
R4607 T6544 T6542 amod similar,]
R4608 T6545 T6544 prep to,similar
R4609 T6546 T6549 det the,allele
R4610 T6547 T6549 amod p 100H,allele
R4611 T6548 T6549 compound mouse,allele
R4612 T6549 T6545 pobj allele,to
R4613 T6550 T6542 punct ),]
R4614 T6551 T6551 ROOT fails,fails
R4615 T6552 T6553 aux to,repress
R4616 T6553 T6551 xcomp repress,fails
R4617 T6554 T6555 amod E-Luc,activity
R4618 T6555 T6553 dobj activity,repress
R4619 T6556 T6558 punct (,2B
R4620 T6557 T6558 compound Figure,2B
R4621 T6558 T6555 appos 2B,activity
R4622 T6559 T6558 punct ),2B
R4623 T6560 T6551 punct .,fails
R4624 T6561 T6562 det These,data
R4625 T6562 T6563 nsubj data,indicate
R4626 T6563 T6563 ROOT indicate,indicate
R4627 T6564 T6568 mark that,repress
R4628 T6565 T6566 amod Sox6,acts
R4629 T6566 T6568 nsubj acts,repress
R4630 T6567 T6568 aux to,repress
R4631 T6568 T6563 ccomp repress,indicate
R4632 T6569 T6571 det the,promoter
R4633 T6570 T6571 amod ɛy,promoter
R4634 T6571 T6568 dobj promoter,repress
R4635 T6572 T6571 prep at,promoter
R4636 T6573 T6575 det the,level
R4637 T6574 T6575 amod transcriptional,level
R4638 T6575 T6572 pobj level,at
R4639 T6576 T6563 punct .,indicate

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T5722 952-956 Protein denotes Sox6
T5721 833-839 Entity denotes domain
T5720 771-785 Positive_regulation denotes overexpression
T5719 771-785 Gene_expression denotes overexpression
T5718 901-904 Protein denotes Luc
T5717 861-880 Protein denotes p 100H mouse allele
T5716 829-832 Protein denotes HMG
T5715 801-805 Protein denotes Sox6
T5714 707-717 Negative_regulation denotes repression
T5713 615-629 Positive_regulation denotes Overexpression
T5712 615-629 Gene_expression denotes Overexpression
T5711 721-735 Protein denotes E-Luc reporter
T5710 633-637 Protein denotes Sox6
T5709 530-554 Protein denotes luciferase reporter gene
T5708 420-423 Protein denotes Luc
T5707 323-332 Gene_expression denotes expresses
T5706 178-186 Entity denotes promoter
T5705 351-363 Protein denotes beta globins
T5704 144-148 Protein denotes Sox6
T5703 63-70 Protein denotes ɛy mRNA
R3939 T5705 T5707 themeOf beta globins,expresses
R3940 T5710 T5712 themeOf Sox6,Overexpression
R3941 T5711 T5714 themeOf E-Luc reporter,repression
R3942 T5712 T5713 themeOf Overexpression,Overexpression
R3943 T5713 T5714 causeOf Overexpression,repression
R3944 T5715 T5719 themeOf Sox6,overexpression
R3945 T5716 T5721 partOf HMG,domain
R3946 T5719 T5720 themeOf overexpression,overexpression

testone

Id Subject Object Predicate Lexical cue
T5509 980-988 Entity denotes promoter
T5508 965-972 Negative_regulation denotes repress
T5507 76-91 Transcription denotes transcriptional
T5487 977-979 Protein denotes ɛy
T5486 952-956 Protein denotes Sox6
T5485 801-805 Protein denotes Sox6
T5484 633-637 Protein denotes Sox6
T5483 530-540 Protein denotes luciferase
T5482 483-485 Protein denotes ɛy
T5481 386-388 Protein denotes ɛy
T5480 351-363 Protein denotes beta globins
T5479 338-340 Protein denotes ɛy
T5478 170-172 Protein denotes ɛy
T5477 144-148 Protein denotes Sox6
T5476 108-110 Protein denotes ɛy
T5475 63-65 Protein denotes ɛy
R3886 T5486 T5508 causeOf Sox6,repress
R3894 T5509 T5487 partOf promoter,ɛy
R3895 T5509 T5508 themeOf promoter,repress

test3

Id Subject Object Predicate Lexical cue
T5567 977-979 Protein denotes ɛy
T5566 965-972 Negative_regulation denotes repress
T5565 952-956 Protein denotes Sox6
T5564 801-805 Protein denotes Sox6
T5563 633-637 Protein denotes Sox6
T5562 530-540 Protein denotes luciferase
T5561 483-485 Protein denotes ɛy
T5560 386-388 Protein denotes ɛy
T5559 351-363 Protein denotes beta globins
T5558 338-340 Protein denotes ɛy
T5557 170-172 Protein denotes ɛy
T5556 144-148 Protein denotes Sox6
T5555 108-110 Protein denotes ɛy
T5554 63-65 Protein denotes ɛy
T5532 977-979 Protein denotes ɛy
T5531 952-956 Protein denotes Sox6
T5530 801-805 Protein denotes Sox6
T5529 633-637 Protein denotes Sox6
T5528 530-540 Protein denotes luciferase
T5527 483-485 Protein denotes ɛy
T5526 386-388 Protein denotes ɛy
T5525 351-363 Protein denotes beta globins
T5524 338-340 Protein denotes ɛy
T5523 170-172 Protein denotes ɛy
T5522 144-148 Protein denotes Sox6
T5521 108-110 Protein denotes ɛy
T5520 63-65 Protein denotes ɛy
R3899 T5557 T5556 themeOf ɛy,Sox6
R3900 T5558 T5556 themeOf ɛy,Sox6
R3901 T5559 T5556 themeOf beta globins,Sox6
R3902 T5565 T5566 causeOf Sox6,repress