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PMC:1359074 / 1068-1293 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T450 211-215 NN denotes Sox6
T449 209-210 -COMMA- denotes ,
T448 205-209 RB denotes Thus
T447 193-203 NN denotes maturation
T446 188-192 NN denotes cell
T445 178-187 JJ denotes erythroid
T444 175-177 IN denotes in
T443 170-174 NN denotes Sox6
T442 166-169 IN denotes for
T441 161-165 NN denotes role
T440 159-160 DT denotes a
T439 150-158 VB denotes suggests
T438 146-149 CC denotes and
T437 131-145 NN denotes erythropoiesis
T436 120-130 JJ denotes definitive
T435 117-119 IN denotes in
T434 110-116 NN denotes globin
T433 107-109 JJ denotes ɛy
T429 81-89 VB denotes required
T428 78-80 VB denotes is
T427 73-77 NN denotes Sox6
T426 68-72 IN denotes that
T425 62-67 VB denotes shows
T424 56-61 NN denotes study
T423 48-55 JJ denotes present
T422 44-47 DT denotes The
T421 28-42 NN denotes erythropoiesis
T420 17-27 JJ denotes definitive
T419 14-16 IN denotes in
T418 4-13 NN denotes functions
T431 94-103 NN denotes silencing
T430 90-93 IN denotes for
T432 104-106 IN denotes of
R211 T421 T419 arg2Of erythropoiesis,in
R212 T421 T420 arg1Of erythropoiesis,definitive
R213 T424 T422 arg1Of study,The
R214 T424 T423 arg1Of study,present
R215 T424 T425 arg1Of study,shows
R216 T427 T428 arg1Of Sox6,is
R217 T427 T429 arg2Of Sox6,required
R218 T427 T439 arg1Of Sox6,suggests
R219 T429 T428 arg2Of required,is
R220 T429 T430 arg1Of required,for
R221 T429 T438 arg1Of required,and
R222 T431 T430 arg2Of silencing,for
R223 T431 T432 arg1Of silencing,of
R224 T431 T435 arg1Of silencing,in
R225 T434 T432 arg2Of globin,of
R226 T434 T433 arg1Of globin,ɛy
R227 T437 T435 arg2Of erythropoiesis,in
R228 T437 T436 arg1Of erythropoiesis,definitive
R229 T438 T425 arg2Of and,shows
R230 T438 T426 arg1Of and,that
R231 T439 T438 arg2Of suggests,and
R232 T441 T439 arg2Of role,suggests
R233 T441 T440 arg1Of role,a
R234 T441 T442 arg1Of role,for
R235 T441 T444 arg1Of role,in
R236 T443 T442 arg2Of Sox6,for
R237 T447 T444 arg2Of maturation,in
R238 T447 T445 arg1Of maturation,erythroid
R239 T447 T446 arg1Of maturation,cell

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T160 73-77 Protein denotes Sox6
T161 107-116 Protein denotes ɛy globin
T162 170-174 Protein denotes Sox6
T163 211-215 Protein denotes Sox6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T481 73-77 http://www.uniprot.org/uniprot/P35712 denotes Sox6
T482 170-174 http://www.uniprot.org/uniprot/P35712 denotes Sox6
T483 211-215 http://www.uniprot.org/uniprot/P35712 denotes Sox6

GO-BP

Id Subject Object Predicate Lexical cue
T109 131-145 http://purl.obolibrary.org/obo/GO_0030218 denotes erythropoiesis
T108 28-42 http://purl.obolibrary.org/obo/GO_0030218 denotes erythropoiesis
T106 120-145 http://purl.obolibrary.org/obo/GO_0060318 denotes definitive erythropoiesis
T105 17-42 http://purl.obolibrary.org/obo/GO_0060318 denotes definitive erythropoiesis
T102 110-116 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T114 188-203 http://purl.obolibrary.org/obo/GO_0048469 denotes cell maturation

GO-MF

Id Subject Object Predicate Lexical cue
T167 110-116 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

GO-CC

Id Subject Object Predicate Lexical cue
T176 188-192 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T98 44-204 Sentence denotes The present study shows that Sox6 is required for silencing of ɛy globin in definitive erythropoiesis and suggests a role for Sox6 in erythroid cell maturation.
T10 44-204 Sentence denotes The present study shows that Sox6 is required for silencing of ɛy globin in definitive erythropoiesis and suggests a role for Sox6 in erythroid cell maturation.

simple1

Id Subject Object Predicate Lexical cue
T248 211-215 Protein denotes Sox6
T247 170-174 Protein denotes Sox6
T246 107-116 Protein denotes ɛy globin
T245 73-77 Protein denotes Sox6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T890 73-77 Protein denotes Sox6
T891 107-116 Protein denotes ɛy globin
T892 170-174 Protein denotes Sox6
T893 211-215 Protein denotes Sox6
T902 81-89 Positive_regulation denotes required
T903 94-103 Negative_regulation denotes silencing
R593 T891 T903 themeOf ɛy globin,silencing
R596 T903 T902 themeOf silencing,required

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T498 73-77 Protein denotes Sox6
T499 107-116 Protein denotes ɛy globin
T500 170-174 Protein denotes Sox6
T501 211-215 Protein denotes Sox6
T512 94-103 Negative_regulation denotes silencing
T513 81-89 Positive_regulation denotes required
R454 T498 T513 causeOf Sox6,required
R455 T499 T512 themeOf ɛy globin,silencing
R460 T512 T513 themeOf silencing,required

DLUT931

Id Subject Object Predicate Lexical cue
T543 81-89 Positive_regulation denotes required
T542 94-103 Negative_regulation denotes silencing
T529 73-77 Protein denotes Sox6
T530 107-116 Protein denotes ɛy globin
T531 170-174 Protein denotes Sox6
T532 211-215 Protein denotes Sox6
R266 T542 T543 themeOf silencing,required
R469 T529 T543 causeOf Sox6,required
R470 T530 T542 themeOf ɛy globin,silencing

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T874 94-145 Negative_regulation denotes silencing of ɛy globin in definitive erythropoiesis
T842 73-77 Protein denotes Sox6
T847 211-215 Protein denotes Sox6
T857 104-116 Protein denotes of ɛy globin
T863 170-174 Protein denotes Sox6
R581 T857 T874 themeOf of ɛy globin,silencing of ɛy globin in definitive erythropoiesis

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T747 4-13 NNS denotes functions
T748 14-16 IN denotes in
T749 17-27 JJ denotes definitive
T750 28-42 NNS denotes erythropoiesis
T751 42-43 . denotes .
T752 44-47 DT denotes The
T753 48-55 JJ denotes present
T754 56-61 NN denotes study
T755 62-67 VBZ denotes shows
T756 68-72 IN denotes that
T757 73-77 NNP denotes Sox6
T758 78-80 VBZ denotes is
T759 81-89 VBN denotes required
T760 90-93 IN denotes for
T761 94-103 VBG denotes silencing
T762 104-106 IN denotes of
T763 107-109 JJ denotes ɛy
T764 110-116 NN denotes globin
T765 117-119 IN denotes in
T766 120-130 JJ denotes definitive
T767 131-145 NNS denotes erythropoiesis
T768 146-149 CC denotes and
T769 150-158 VBZ denotes suggests
T770 159-160 DT denotes a
T771 161-165 NN denotes role
T772 166-169 IN denotes for
T773 170-174 NNP denotes Sox6
T774 175-177 IN denotes in
T775 178-187 JJ denotes erythroid
T776 188-192 NN denotes cell
T777 193-203 NN denotes maturation
T778 203-204 . denotes .
T779 205-209 RB denotes Thus
T780 209-210 , denotes ,
T781 211-215 JJ denotes Sox6
R516 T748 T747 prep in,functions
R517 T749 T750 amod definitive,erythropoiesis
R518 T750 T748 pobj erythropoiesis,in
R520 T752 T754 det The,study
R521 T753 T754 amod present,study
R522 T754 T755 nsubj study,shows
R523 T755 T755 ROOT shows,shows
R524 T756 T759 mark that,required
R525 T757 T759 nsubjpass Sox6,required
R526 T758 T759 auxpass is,required
R527 T759 T755 ccomp required,shows
R528 T760 T759 prep for,required
R529 T761 T760 pcomp silencing,for
R530 T762 T761 prep of,silencing
R531 T763 T764 amod ɛy,globin
R532 T764 T762 pobj globin,of
R533 T765 T761 prep in,silencing
R534 T766 T767 amod definitive,erythropoiesis
R535 T767 T765 pobj erythropoiesis,in
R536 T768 T759 cc and,required
R537 T769 T755 conj suggests,shows
R538 T770 T771 det a,role
R539 T771 T769 dobj role,suggests
R540 T772 T771 prep for,role
R541 T773 T772 pobj Sox6,for
R542 T774 T771 prep in,role
R543 T775 T777 amod erythroid,maturation
R544 T776 T777 compound cell,maturation
R545 T777 T774 pobj maturation,in
R546 T778 T755 punct .,shows

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T228 211-215 Protein denotes Sox6
T227 81-89 Positive_regulation denotes required
T225 170-174 Protein denotes Sox6
T224 110-116 Protein denotes globin
T223 73-77 Protein denotes Sox6
T226 94-103 Negative_regulation denotes silencing
R39 T223 T227 causeOf Sox6,required
R40 T224 T226 themeOf globin,silencing
R445 T226 T227 themeOf silencing,required

testone

Id Subject Object Predicate Lexical cue
T34 73-77 Protein denotes Sox6
T35 107-116 Protein denotes ɛy globin
T36 170-174 Protein denotes Sox6
T37 211-215 Protein denotes Sox6

test3

Id Subject Object Predicate Lexical cue
T84 211-215 Protein denotes Sox6
T83 170-174 Protein denotes Sox6
T82 107-116 Protein denotes ɛy globin
T59 73-77 Protein denotes Sox6
T60 107-116 Protein denotes ɛy globin
T61 170-174 Protein denotes Sox6
T62 211-215 Protein denotes Sox6
T81 73-77 Protein denotes Sox6
R16 T82 T81 themeOf ɛy globin,Sox6
R17 T83 T81 themeOf Sox6,Sox6