
PMC:1359071 / 44420-44677
Annnotations
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T21058 | 164-169 | SO:0000704 | denotes | genes |
T21059 | 208-213 | SO:0000704 | denotes | genes |
T21060 | 226-235 | GO:0010467 | denotes | expressed |
T21061 | 243-248 | UBERON:0002107 | denotes | liver |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T21116 | 164-169 | SO_EXT:0000704 | denotes | genes |
T21117 | 208-213 | SO_EXT:0000704 | denotes | genes |
T21118 | 226-235 | GO:0010467 | denotes | expressed |
T21119 | 243-248 | UBERON:0002107 | denotes | liver |
craft-sa-dev
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T21958 | 0-257 | sentence | denotes | To determine which of the four models (Equations 2, 4, 6, and the model selection) is optimal, we empirically estimated the FDR for each model over a set of 3,000 genes randomly selected from the set of all genes detected as expressed in the liver samples. |
T21959 | 1-3 | TO | denotes | To |
T21960 | 4-13 | VB | denotes | determine |
T21961 | 111-120 | VBD | denotes | estimated |
T21962 | 14-19 | WDT | denotes | which |
T21963 | 84-86 | VBZ | denotes | is |
T21964 | 20-22 | IN | denotes | of |
T21965 | 23-26 | DT | denotes | the |
T21966 | 32-38 | NNS | denotes | models |
T21967 | 27-31 | CD | denotes | four |
T21968 | 39-40 | -LRB- | denotes | ( |
T21969 | 56-57 | CD | denotes | 6 |
T21970 | 40-49 | NNS | denotes | Equations |
T21971 | 50-51 | CD | denotes | 2 |
T21972 | 51-53 | , | denotes | , |
T21973 | 53-54 | CD | denotes | 4 |
T21974 | 54-56 | , | denotes | , |
T21975 | 57-59 | , | denotes | , |
T21976 | 59-62 | CC | denotes | and |
T21977 | 63-66 | DT | denotes | the |
T21978 | 73-82 | NN | denotes | selection |
T21979 | 67-72 | NN | denotes | model |
T21980 | 82-83 | -RRB- | denotes | ) |
T21981 | 87-94 | JJ | denotes | optimal |
T21982 | 94-96 | , | denotes | , |
T21983 | 96-98 | PRP | denotes | we |
T21984 | 99-110 | RB | denotes | empirically |
T21985 | 121-124 | DT | denotes | the |
T21986 | 125-128 | NN | denotes | FDR |
T21987 | 129-132 | IN | denotes | for |
T21988 | 133-137 | DT | denotes | each |
T21989 | 138-143 | NN | denotes | model |
T21990 | 144-148 | IN | denotes | over |
T21991 | 149-150 | DT | denotes | a |
T21992 | 151-154 | NN | denotes | set |
T21993 | 155-157 | IN | denotes | of |
T21994 | 158-163 | CD | denotes | 3,000 |
T21995 | 164-169 | NNS | denotes | genes |
T21996 | 170-178 | RB | denotes | randomly |
T21997 | 179-187 | VBN | denotes | selected |
T21998 | 188-192 | IN | denotes | from |
T21999 | 193-196 | DT | denotes | the |
T22000 | 197-200 | NN | denotes | set |
T22001 | 201-203 | IN | denotes | of |
T22002 | 204-207 | DT | denotes | all |
T22003 | 208-213 | NNS | denotes | genes |
T22004 | 214-222 | VBN | denotes | detected |
T22005 | 223-225 | IN | denotes | as |
T22006 | 226-235 | VBN | denotes | expressed |
T22007 | 236-238 | IN | denotes | in |
T22008 | 239-242 | DT | denotes | the |
T22009 | 249-256 | NNS | denotes | samples |
T22010 | 243-248 | NN | denotes | liver |
T22011 | 256-257 | . | denotes | . |
R6744 | T21959 | T21960 | aux | To,determine |
R6745 | T21960 | T21961 | advcl | determine,estimated |
R6746 | T21962 | T21963 | dep | which,is |
R6747 | T21963 | T21960 | ccomp | is,determine |
R6748 | T21964 | T21962 | prep | of,which |
R6749 | T21965 | T21966 | det | the,models |
R6750 | T21966 | T21964 | pobj | models,of |
R6751 | T21967 | T21966 | nummod | four,models |
R6752 | T21968 | T21969 | punct | (,6 |
R6753 | T21969 | T21966 | parataxis | 6,models |
R6754 | T21970 | T21969 | nmod | Equations,6 |
R6755 | T21971 | T21969 | nummod | 2,6 |
R6756 | T21972 | T21969 | punct | ", ",6 |
R6757 | T21973 | T21969 | nummod | 4,6 |
R6758 | T21974 | T21969 | punct | ", ",6 |
R6759 | T21975 | T21969 | punct | ", ",6 |
R6760 | T21976 | T21969 | cc | and,6 |
R6761 | T21977 | T21978 | det | the,selection |
R6762 | T21978 | T21969 | conj | selection,6 |
R6763 | T21979 | T21978 | compound | model,selection |
R6764 | T21980 | T21969 | punct | ),6 |
R6765 | T21981 | T21963 | acomp | optimal,is |
R6766 | T21982 | T21961 | punct | ", ",estimated |
R6767 | T21983 | T21961 | nsubj | we,estimated |
R6768 | T21984 | T21961 | advmod | empirically,estimated |
R6769 | T21985 | T21986 | det | the,FDR |
R6770 | T21986 | T21961 | dobj | FDR,estimated |
R6771 | T21987 | T21961 | prep | for,estimated |
R6772 | T21988 | T21989 | det | each,model |
R6773 | T21989 | T21987 | pobj | model,for |
R6774 | T21990 | T21961 | prep | over,estimated |
R6775 | T21991 | T21992 | det | a,set |
R6776 | T21992 | T21990 | pobj | set,over |
R6777 | T21993 | T21992 | prep | of,set |
R6778 | T21994 | T21995 | nummod | "3,000",genes |
R6779 | T21995 | T21993 | pobj | genes,of |
R6780 | T21996 | T21997 | advmod | randomly,selected |
R6781 | T21997 | T21995 | acl | selected,genes |
R6782 | T21998 | T21997 | prep | from,selected |
R6783 | T21999 | T22000 | det | the,set |
R6784 | T22000 | T21998 | pobj | set,from |
R6785 | T22001 | T22000 | prep | of,set |
R6786 | T22002 | T22003 | det | all,genes |
R6787 | T22003 | T22001 | pobj | genes,of |
R6788 | T22004 | T22000 | acl | detected,set |
R6789 | T22005 | T22006 | mark | as,expressed |
R6790 | T22006 | T22004 | advcl | expressed,detected |
R6791 | T22007 | T22006 | prep | in,expressed |
R6792 | T22008 | T22009 | det | the,samples |
R6793 | T22009 | T22007 | pobj | samples,in |
R6794 | T22010 | T22009 | compound | liver,samples |
R6795 | T22011 | T21961 | punct | .,estimated |