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craft-ca-core-dev

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Id Subject Object Predicate Lexical cue
T7286 1357-1363 SO:0001026 denotes genome

craft-ca-core-ex-dev

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Id Subject Object Predicate Lexical cue
T7336 1357-1363 SO_EXT:0001026 denotes genome

craft-sa-dev

Id Subject Object Predicate Lexical cue
T7893 0-1399 sentence denotes Table 3 Characteristics of Liver eQTLs Figure 4 Properties of All Liver eQTLs (A) Distribution of all significant liver eQTLs across the genome in 2-cM bins. A total of 6,676 significant eQTLs were realized, representing 4,998 liver transcripts. Hotspots of nonrandom eQTL colocalization are clearly evident. (B) Distribution of eQTLs with significant sex-specific effects. A total of 1,166 eQTLs representing 1,044 transcripts show an eQTL hotspot on Chromosome 5. (C) Properties of eQTLs at increasing significance levels. As the threshold for significant linkage increases (p-value decreases, or LOD score increases), the proportion of cis-eQTLs (black) increases. The fraction of all eQTLs with sex effects (red) and cis-eQTLs with sex effects (blue) remains relatively constant at increasing thresholds. The dashed line indicates the genome-wide significance threshold (p < 5 × 10−5; genome-wide p < 0.05). (D) Properties of sex-specific eQTLs at increasing significance levels. For eQTLs with significant sex effects, as with all eQTLs, the proportion of cis-eQTLs (black) increases and trans (blue) decreases as the threshold for significance increases. At the genome-wide threshold for significance (dashed line), over 70% of eQTLs with significant sex effects are trans. The distribution of all 6,676 significant eQTLs (p < 5 × 10−5) across the genome in 2 cM bins is shown in Figure 4A.
T7894 1-1286 DT denotes Table 3 Characteristics of Liver eQTLs Figure 4 Properties of All Liver eQTLs (A) Distribution of all significant liver eQTLs across the genome in 2-cM bins. A total of 6,676 significant eQTLs were realized, representing 4,998 liver transcripts. Hotspots of nonrandom eQTL colocalization are clearly evident. (B) Distribution of eQTLs with significant sex-specific effects. A total of 1,166 eQTLs representing 1,044 transcripts show an eQTL hotspot on Chromosome 5. (C) Properties of eQTLs at increasing significance levels. As the threshold for significant linkage increases (p-value decreases, or LOD score increases), the proportion of cis-eQTLs (black) increases. The fraction of all eQTLs with sex effects (red) and cis-eQTLs with sex effects (blue) remains relatively constant at increasing thresholds. The dashed line indicates the genome-wide significance threshold (p < 5 × 10−5; genome-wide p < 0.05). (D) Properties of sex-specific eQTLs at increasing significance levels. For eQTLs with significant sex effects, as with all eQTLs, the proportion of cis-eQTLs (black) increases and trans (blue) decreases as the threshold for significance increases. At the genome-wide threshold for significance (dashed line), over 70% of eQTLs with significant sex effects are trans. The
T7895 1287-1299 NN denotes distribution
T7896 1380-1385 VBN denotes shown
T7897 1300-1302 IN denotes of
T7898 1303-1306 DT denotes all
T7899 1325-1330 NNS denotes eQTLs
T7900 1307-1312 CD denotes 6,676
T7901 1313-1324 JJ denotes significant
T7902 1331-1332 -LRB- denotes (
T7903 1336-1337 CD denotes 5
T7904 1332-1333 NN denotes p
T7905 1334-1335 SYM denotes <
T7906 1338-1339 SYM denotes ×
T7907 1340-1342 CD denotes 10
T7908 1343-1344 CD denotes 5
T7909 1342-1343 SYM denotes −
T7910 1344-1345 -RRB- denotes )
T7911 1346-1352 IN denotes across
T7912 1353-1356 DT denotes the
T7913 1357-1363 NN denotes genome
T7914 1364-1366 IN denotes in
T7915 1367-1368 CD denotes 2
T7916 1369-1371 NN denotes cM
T7917 1372-1376 NNS denotes bins
T7918 1377-1379 VBZ denotes is
T7919 1386-1388 IN denotes in
T7920 1389-1395 NN denotes Figure
T7921 1396-1398 NN denotes 4A
T7922 1398-1399 . denotes .
R2371 T7894 T7895 det "Table 3 Characteristics of Liver eQTLs Figure 4 Properties of All Liver eQTLs (A) Distribution of all significant liver eQTLs across the genome in 2-cM bins. A total of 6,676 significant eQTLs were realized, representing 4,998 liver transcripts. Hotspots of nonrandom eQTL colocalization are clearly evident. (B) Distribution of eQTLs with significant sex-specific effects. A total of 1,166 eQTLs representing 1,044 transcripts show an eQTL hotspot on Chromosome 5. (C) Properties of eQTLs at increasing significance levels. As the threshold for significant linkage increases (p-value decreases, or LOD score increases), the proportion of cis-eQTLs (black) increases. The fraction of all eQTLs with sex effects (red) and cis-eQTLs with sex effects (blue) remains relatively constant at increasing thresholds. The dashed line indicates the genome-wide significance threshold (p < 5 × 10−5; genome-wide p < 0.05). (D) Properties of sex-specific eQTLs at increasing significance levels. For eQTLs with significant sex effects, as with all eQTLs, the proportion of cis-eQTLs (black) increases and trans (blue) decreases as the threshold for significance increases. At the genome-wide threshold for significance (dashed line), over 70% of eQTLs with significant sex effects are trans. The",distribution
R2372 T7895 T7896 nsubjpass distribution,shown
R2373 T7897 T7895 prep of,distribution
R2374 T7898 T7899 det all,eQTLs
R2375 T7899 T7897 pobj eQTLs,of
R2376 T7900 T7899 nummod "6,676",eQTLs
R2377 T7901 T7899 amod significant,eQTLs
R2378 T7902 T7903 punct (,5
R2379 T7903 T7899 parataxis 5,eQTLs
R2380 T7904 T7903 nsubj p,5
R2381 T7905 T7903 punct <,5
R2382 T7906 T7903 punct ×,5
R2383 T7907 T7908 nummod 10,5
R2384 T7908 T7903 appos 5,5
R2385 T7909 T7908 punct −,5
R2386 T7910 T7903 punct ),5
R2387 T7911 T7895 prep across,distribution
R2388 T7912 T7913 det the,genome
R2389 T7913 T7911 pobj genome,across
R2390 T7914 T7895 prep in,distribution
R2391 T7915 T7916 nummod 2,cM
R2392 T7916 T7917 compound cM,bins
R2393 T7917 T7914 pobj bins,in
R2394 T7918 T7896 auxpass is,shown
R2395 T7919 T7896 prep in,shown
R2396 T7920 T7921 compound Figure,4A
R2397 T7921 T7919 pobj 4A,in
R2398 T7922 T7896 punct .,shown