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PMC:1315279 / 5024-5305 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T1435 0-281 sentence denotes While several transcriptional regulatory proteins have been associated with cell fate determination of bone marrow mesenchymal cells, including peroxisome proliferator–activated receptor γ (PPARγ) and KLF5 [25–30], the role of RNA binding proteins in this process remains unknown.
T1436 1-6 IN denotes While
T1437 61-71 VBN denotes associated
T1438 7-14 JJ denotes several
T1439 42-50 NN denotes proteins
T1440 15-30 JJ denotes transcriptional
T1441 31-41 JJ denotes regulatory
T1442 51-55 VBP denotes have
T1443 56-60 VBN denotes been
T1444 265-272 VBZ denotes remains
T1445 72-76 IN denotes with
T1446 77-81 NN denotes cell
T1447 87-100 NN denotes determination
T1448 82-86 NN denotes fate
T1449 101-103 IN denotes of
T1450 104-108 NN denotes bone
T1451 109-115 NN denotes marrow
T1452 128-133 NNS denotes cells
T1453 116-127 JJ denotes mesenchymal
T1454 133-135 , denotes ,
T1455 135-144 VBG denotes including
T1456 145-155 NN denotes peroxisome
T1457 179-187 NN denotes receptor
T1458 156-168 NN denotes proliferator
T1459 169-178 VBN denotes activated
T1460 168-169 HYPH denotes –
T1461 188-189 SYM denotes γ
T1462 190-191 -LRB- denotes (
T1463 191-196 NN denotes PPARγ
T1464 196-197 -RRB- denotes )
T1465 198-201 CC denotes and
T1466 202-206 NN denotes KLF5
T1467 207-208 -LRB- denotes [
T1468 208-210 CD denotes 25
T1469 210-211 SYM denotes –
T1470 211-213 CD denotes 30
T1471 213-214 -RRB- denotes ]
T1472 214-216 , denotes ,
T1473 216-219 DT denotes the
T1474 220-224 NN denotes role
T1475 225-227 IN denotes of
T1476 228-231 NN denotes RNA
T1477 240-248 NN denotes proteins
T1478 232-239 NN denotes binding
T1479 249-251 IN denotes in
T1480 252-256 DT denotes this
T1481 257-264 NN denotes process
T1482 273-280 JJ denotes unknown
T1483 280-281 . denotes .
R699 T1436 T1437 mark While,associated
R700 T1437 T1444 advcl associated,remains
R701 T1438 T1439 amod several,proteins
R702 T1439 T1437 nsubjpass proteins,associated
R703 T1440 T1439 amod transcriptional,proteins
R704 T1441 T1439 amod regulatory,proteins
R705 T1442 T1437 aux have,associated
R706 T1443 T1437 auxpass been,associated
R707 T1445 T1437 prep with,associated
R708 T1446 T1447 compound cell,determination
R709 T1447 T1445 pobj determination,with
R710 T1448 T1447 compound fate,determination
R711 T1449 T1447 prep of,determination
R712 T1450 T1451 nmod bone,marrow
R713 T1451 T1452 nmod marrow,cells
R714 T1452 T1449 pobj cells,of
R715 T1453 T1452 amod mesenchymal,cells
R716 T1454 T1452 punct ", ",cells
R717 T1455 T1452 prep including,cells
R718 T1456 T1457 nmod peroxisome,receptor
R719 T1457 T1455 pobj receptor,including
R720 T1458 T1459 npadvmod proliferator,activated
R721 T1459 T1457 amod activated,receptor
R722 T1460 T1459 punct –,activated
R723 T1461 T1457 punct γ,receptor
R724 T1462 T1457 punct (,receptor
R725 T1463 T1457 appos PPARγ,receptor
R726 T1464 T1457 punct ),receptor
R727 T1465 T1457 cc and,receptor
R728 T1466 T1457 conj KLF5,receptor
R729 T1467 T1468 punct [,25
R730 T1468 T1437 parataxis 25,associated
R731 T1469 T1470 punct –,30
R732 T1470 T1468 prep 30,25
R733 T1471 T1468 punct ],25
R734 T1472 T1444 punct ", ",remains
R735 T1473 T1474 det the,role
R736 T1474 T1444 nsubj role,remains
R737 T1475 T1474 prep of,role
R738 T1476 T1477 compound RNA,proteins
R739 T1477 T1475 pobj proteins,of
R740 T1478 T1477 compound binding,proteins
R741 T1479 T1474 prep in,role
R742 T1480 T1481 det this,process
R743 T1481 T1479 pobj process,in
R744 T1482 T1444 acomp unknown,remains
R745 T1483 T1444 punct .,remains

2_test

Id Subject Object Predicate Lexical cue
16362077-11792318-85614441 208-210 11792318 denotes 25
16362077-9182762-85614441 208-210 9182762 denotes 25
16362077-12000792-85614441 208-210 12000792 denotes 25
16362077-16054042-85614441 208-210 16054042 denotes 25
16362077-10549292-85614441 208-210 10549292 denotes 25
16362077-10549291-85614441 208-210 10549291 denotes 25
T14670 208-210 11792318 denotes 25
T63095 208-210 9182762 denotes 25
T95663 208-210 12000792 denotes 25
T94849 208-210 16054042 denotes 25
T36942 208-210 10549292 denotes 25
T86186 208-210 10549291 denotes 25

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T772 31-41 GO:0065007 denotes regulatory
T773 77-100 GO:0001709 denotes cell fate determination
T774 104-115 UBERON:0002371 denotes bone marrow
T775 104-133 CL:0002540 denotes bone marrow mesenchymal cells
T776 116-127 UBERON:0003104 denotes mesenchymal
T777 145-155 GO:0005777 denotes peroxisome
T778 145-189 PR:000013058 denotes peroxisome proliferator–activated receptor γ
T779 191-196 PR:000013058 denotes PPARγ
T780 202-206 PR:000009365 denotes KLF5

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T920 15-30 GO_EXT:transcription denotes transcriptional
T921 31-41 GO:0065007 denotes regulatory
T922 42-50 CHEBI_PR_EXT:protein denotes proteins
T923 77-81 CL_GO_EXT:cell denotes cell
T924 77-100 GO:0001709 denotes cell fate determination
T925 104-115 UBERON:0002371 denotes bone marrow
T926 104-133 CL:0002540 denotes bone marrow mesenchymal cells
T927 116-127 UBERON:0003104 denotes mesenchymal
T928 128-133 CL_GO_EXT:cell denotes cells
T929 145-155 GO:0005777 denotes peroxisome
T930 145-189 PR_EXT:000013058 denotes peroxisome proliferator–activated receptor γ
T931 179-187 GO_EXT:0004872 denotes receptor
T932 191-196 PR_EXT:000013058 denotes PPARγ
T933 202-206 PR_EXT:000009365 denotes KLF5
T934 228-231 CHEBI_SO_EXT:RNA denotes RNA
T935 232-239 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T936 240-248 CHEBI_PR_EXT:protein denotes proteins