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PMC:1315279 / 40981-41233 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T9508 3-5 IN denotes in
T9509 6-9 DT denotes the
T9510 15-19 NN denotes site
T9511 10-14 NN denotes NotI
T9512 20-22 IN denotes of
T9513 23-27 NN denotes pPNT
T9514 27-28 . denotes .
T9515 28-136 sentence denotes The targeting vector pPNT-Sam68 replaces exon 4 and part of exon 5 with a neomycin-resistant gene cassette.
T9516 29-32 DT denotes The
T9517 43-49 NN denotes vector
T9518 33-42 NN denotes targeting
T9519 61-69 VBZ denotes replaces
T9520 50-54 NN denotes pPNT
T9521 55-60 NN denotes Sam68
T9522 54-55 HYPH denotes -
T9523 70-74 NN denotes exon
T9524 75-76 CD denotes 4
T9525 77-80 CC denotes and
T9526 81-85 NN denotes part
T9527 86-88 IN denotes of
T9528 89-93 NN denotes exon
T9529 94-95 CD denotes 5
T9530 96-100 IN denotes with
T9531 101-102 DT denotes a
T9532 127-135 NN denotes cassette
T9533 103-111 NN denotes neomycin
T9534 112-121 JJ denotes resistant
T9535 111-112 HYPH denotes -
T9536 122-126 NN denotes gene
T9537 135-136 . denotes .
T9539 137-139 DT denotes An
T9540 145-149 NN denotes site
T9541 140-144 NN denotes SalI
T9542 154-164 VBN denotes introduced
T9543 150-153 VBD denotes was
T9544 165-167 IN denotes at
T9545 168-171 DT denotes the
T9546 175-178 NN denotes end
T9547 172-173 CD denotes 3
T9548 173-174 SYM denotes ′
T9549 179-181 IN denotes of
T9550 182-185 DT denotes the
T9551 195-203 NN denotes fragment
T9552 186-187 CD denotes 3
T9553 188-190 NN denotes kb
T9554 187-188 HYPH denotes -
T9555 191-194 NN denotes DNA
T9556 204-207 CC denotes and
T9557 208-211 VBD denotes was
T9558 212-216 VBN denotes used
T9559 217-219 TO denotes to
T9560 220-229 VB denotes linearize
T9561 230-233 DT denotes the
T9562 234-241 NN denotes plasmid
T9563 242-245 IN denotes for
R5977 T9509 T9510 det the,site
R5978 T9510 T9508 pobj site,in
R5979 T9511 T9510 compound NotI,site
R5980 T9512 T9510 prep of,site
R5981 T9513 T9512 pobj pPNT,of
R5983 T9516 T9517 det The,vector
R5984 T9517 T9519 nsubj vector,replaces
R5985 T9518 T9517 compound targeting,vector
R5986 T9520 T9521 compound pPNT,Sam68
R5987 T9521 T9517 appos Sam68,vector
R5988 T9522 T9521 punct -,Sam68
R5989 T9523 T9519 dobj exon,replaces
R5990 T9524 T9523 nummod 4,exon
R5991 T9525 T9523 cc and,exon
R5992 T9526 T9523 conj part,exon
R5993 T9527 T9526 prep of,part
R5994 T9528 T9527 pobj exon,of
R5995 T9529 T9528 nummod 5,exon
R5996 T9530 T9519 prep with,replaces
R5997 T9531 T9532 det a,cassette
R5998 T9532 T9530 pobj cassette,with
R5999 T9533 T9534 npadvmod neomycin,resistant
R6000 T9534 T9532 amod resistant,cassette
R6001 T9535 T9534 punct -,resistant
R6002 T9536 T9532 compound gene,cassette
R6003 T9537 T9519 punct .,replaces
R6004 T9539 T9540 det An,site
R6005 T9540 T9542 nsubjpass site,introduced
R6006 T9541 T9540 compound SalI,site
R6007 T9543 T9542 auxpass was,introduced
R6008 T9544 T9542 prep at,introduced
R6009 T9545 T9546 det the,end
R6010 T9546 T9544 pobj end,at
R6011 T9547 T9546 nummod 3,end
R6012 T9548 T9547 punct ′,3
R6013 T9549 T9546 prep of,end
R6014 T9550 T9551 det the,fragment
R6015 T9551 T9549 pobj fragment,of
R6016 T9552 T9553 nummod 3,kb
R6017 T9553 T9551 compound kb,fragment
R6018 T9554 T9553 punct -,kb
R6019 T9555 T9551 compound DNA,fragment
R6020 T9556 T9542 cc and,introduced
R6021 T9557 T9558 auxpass was,used
R6022 T9558 T9542 conj used,introduced
R6023 T9559 T9560 aux to,linearize
R6024 T9560 T9558 advcl linearize,used
R6025 T9561 T9562 det the,plasmid
R6026 T9562 T9560 dobj plasmid,linearize
R6027 T9563 T9560 prep for,linearize

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T9212 33-49 SO:0001644 denotes targeting vector
T9213 55-60 PR:000009279 denotes Sam68
T9214 70-74 SO:0000147 denotes exon
T9215 81-93 SO:0000852 denotes part of exon
T9216 103-111 CHEBI:7507 denotes neomycin
T9217 122-135 SO:0005853 denotes gene cassette
T9218 234-241 SO:0000155 denotes plasmid

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T9260 33-49 SO_EXT:0001644 denotes targeting vector
T9261 55-60 PR_EXT:000009279 denotes Sam68
T9262 61-69 SO_EXT:sequence_substitution_process denotes replaces
T9263 70-74 SO_EXT:0000147 denotes exon
T9264 81-93 SO_EXT:0000852 denotes part of exon
T9265 103-111 CHEBI:7507 denotes neomycin
T9266 122-135 SO_EXT:0005853 denotes gene cassette
T9267 189-190 CHEBI_SO_EXT:base denotes b
T9268 191-194 CHEBI_SO_EXT:DNA denotes DNA
T9269 220-229 SO_EXT:sequence_linearization denotes linearize
T9270 234-241 SO_EXT:0000155 denotes plasmid