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PMC:1310901 / 997-1202 JSONTXT

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bionlp-st-ge-2016-reference-eval

Id Subject Object Predicate Lexical cue
T886 2-15 Transcription denotes transcription
T887 37-42 Protein denotes IRF-4
T888 43-51 Gene_expression denotes negative
T889 148-156 Positive_regulation denotes resulted
T890 196-204 Positive_regulation denotes increase
R640 T887 T888 themeOf IRF-4,negative
R641 T890 T889 themeOf increase,resulted

events-check-again

Id Subject Object Predicate Lexical cue Negation
T822 2-15 Transcription denotes transcription
T823 37-42 Protein denotes IRF-4
T824 43-51 Gene_expression denotes negative true
T825 148-156 Positive_regulation denotes resulted
T826 196-204 Positive_regulation denotes increase
R607 T823 T824 themeOf IRF-4,negative
R608 T826 T825 themeOf increase,resulted

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T280 2-15 NN denotes transcription
T281 17-22 RB denotes First
T282 22-23 -COMMA- denotes ,
T283 24-33 NN denotes treatment
T284 34-36 IN denotes of
T285 37-51 JJ denotes IRF-4-negative
T286 52-60 JJ denotes lymphoid
T287 60-61 -COMMA- denotes ,
T288 62-69 JJ denotes myeloid
T289 70-73 CC denotes and
T290 74-83 JJ denotes monocytic
T291 84-88 NN denotes cell
T292 89-94 NN denotes lines
T293 95-99 IN denotes with
T294 100-103 DT denotes the
T295 104-125 NN denotes methylation-inhibitor
T296 126-147 NN denotes 5-aza-2-deoxycytidine
T297 148-156 VB denotes resulted
T298 157-159 IN denotes in
T299 160-161 DT denotes a
T300 162-167 NN denotes time-
T301 168-171 CC denotes and
T302 172-195 JJ denotes concentration-dependent
T303 196-204 NN denotes increase
R199 T283 T284 arg1Of treatment,of
R200 T283 T297 arg1Of treatment,resulted
R201 T286 T287 arg1Of lymphoid,","
R202 T287 T289 arg1Of ",",and
R203 T288 T287 arg2Of myeloid,","
R204 T290 T289 arg2Of monocytic,and
R205 T292 T284 arg2Of lines,of
R206 T292 T285 arg1Of lines,IRF-4-negative
R207 T292 T286 arg1Of lines,lymphoid
R208 T292 T288 arg1Of lines,myeloid
R209 T292 T290 arg1Of lines,monocytic
R210 T292 T291 arg1Of lines,cell
R211 T292 T293 arg1Of lines,with
R212 T296 T293 arg2Of 5-aza-2-deoxycytidine,with
R213 T296 T294 arg1Of 5-aza-2-deoxycytidine,the
R214 T296 T295 arg1Of 5-aza-2-deoxycytidine,methylation-inhibitor
R215 T297 T281 arg1Of resulted,First
R216 T297 T282 arg1Of resulted,","
R217 T297 T298 arg1Of resulted,in
R218 T300 T301 arg1Of time-,and
R219 T302 T301 arg2Of concentration-dependent,and
R220 T303 T298 arg2Of increase,in
R221 T303 T299 arg1Of increase,a
R222 T303 T300 arg1Of increase,time-
R223 T303 T302 arg1Of increase,concentration-dependent

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T574 2-15 NN denotes transcription
T575 15-16 . denotes .
T576 17-22 RB denotes First
T577 22-23 , denotes ,
T578 24-33 NN denotes treatment
T579 34-36 IN denotes of
T580 37-51 JJ denotes IRF-4-negative
T581 52-60 NN denotes lymphoid
T582 60-61 , denotes ,
T583 62-69 JJ denotes myeloid
T584 70-73 CC denotes and
T585 74-83 JJ denotes monocytic
T586 84-88 NN denotes cell
T587 89-94 NNS denotes lines
T588 95-99 IN denotes with
T589 100-103 DT denotes the
T590 104-125 NN denotes methylation-inhibitor
T591 126-147 JJ denotes 5-aza-2-deoxycytidine
T592 148-156 VBD denotes resulted
T593 157-159 IN denotes in
T594 160-161 DT denotes a
T595 162-166 NN denotes time
T596 166-167 : denotes -
T597 168-171 CC denotes and
T598 172-195 JJ denotes concentration-dependent
T599 196-204 NN denotes increase
R465 T576 T592 advmod First,resulted
R466 T577 T592 punct ",",resulted
R467 T578 T592 nsubj treatment,resulted
R468 T579 T578 prep of,treatment
R469 T580 T581 amod IRF-4-negative,lymphoid
R470 T581 T579 pobj lymphoid,of
R471 T582 T581 punct ",",lymphoid
R472 T583 T581 conj myeloid,lymphoid
R473 T584 T583 cc and,myeloid
R474 T585 T583 conj monocytic,myeloid
R475 T586 T587 compound cell,lines
R476 T587 T578 pobj lines,treatment
R477 T588 T587 prep with,lines
R478 T589 T591 det the,5-aza-2-deoxycytidine
R479 T590 T591 compound methylation-inhibitor,5-aza-2-deoxycytidine
R480 T591 T588 pobj 5-aza-2-deoxycytidine,with
R481 T592 T592 ROOT resulted,resulted
R482 T593 T592 prep in,resulted
R483 T594 T595 det a,time
R484 T595 T593 pobj time,in
R485 T596 T592 punct -,resulted
R486 T597 T592 cc and,resulted
R487 T598 T599 amod concentration-dependent,increase

GO-BP

Id Subject Object Predicate Lexical cue
T120 2-15 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T125 104-115 http://purl.obolibrary.org/obo/GO_0032259 denotes methylation

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T855 2-15 Transcription denotes transcription
T859 196-204 Positive_regulation denotes increase

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation
T89 2-15 Transcription denotes transcription
T90 37-42 Protein denotes IRF-4
T91 43-51 Gene_expression denotes negative true
T92 148-156 Positive_regulation denotes resulted
T93 196-204 Positive_regulation denotes increase
R658 T90 T91 themeOf IRF-4,negative
R659 T93 T92 themeOf increase,resulted

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T406 37-42 Q15306 denotes IRF-4

test2

Id Subject Object Predicate Lexical cue
T53 2-15 Transcription denotes transcription
T54 37-42 Protein denotes IRF-4
T55 43-51 Gene_expression denotes negative
T56 186-195 Regulation denotes dependent
T57 196-204 Positive_regulation denotes increase
R29 T54 T55 themeOf IRF-4,negative
R30 T57 T56 themeOf increase,dependent