PMC:1310901 / 7361-7528
Annnotations
bionlp-st-ge-2016-reference-eval
{"project":"bionlp-st-ge-2016-reference-eval","denotations":[{"id":"T4321","span":{"begin":58,"end":68},"obj":"Gene_expression"},{"id":"T4332","span":{"begin":44,"end":49},"obj":"Protein"}],"relations":[{"id":"R3512","pred":"themeOf","subj":"T4332","obj":"T4321"}],"text":"e published elsewhere (28).\nFor analysis of IRF-4 protein expression, a standard immunoblotting assay was performed as described previously (29). Briefly, protein lysa"}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T4289","span":{"begin":44,"end":49},"obj":"Protein"},{"id":"T4290","span":{"begin":58,"end":68},"obj":"Gene_expression"}],"relations":[{"id":"R3498","pred":"themeOf","subj":"T4289","obj":"T4290"}],"attributes":[{"id":"M112","pred":"Speculation","subj":"T4290","obj":"true"}],"text":"e published elsewhere (28).\nFor analysis of IRF-4 protein expression, a standard immunoblotting assay was performed as described previously (29). Briefly, protein lysa"}
sentences
{"project":"sentences","denotations":[{"id":"T3414","span":{"begin":28,"end":145},"obj":"Sentence"},{"id":"T57","span":{"begin":28,"end":145},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"e published elsewhere (28).\nFor analysis of IRF-4 protein expression, a standard immunoblotting assay was performed as described previously (29). Briefly, protein lysa"}
2_test
{"project":"2_test","denotations":[{"id":"16396836-12101420-76538184","span":{"begin":23,"end":25},"obj":"12101420"},{"id":"16396836-14656881-76538185","span":{"begin":141,"end":143},"obj":"14656881"}],"text":"e published elsewhere (28).\nFor analysis of IRF-4 protein expression, a standard immunoblotting assay was performed as described previously (29). Briefly, protein lysa"}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T3548","span":{"begin":2,"end":11},"obj":"VB"},{"id":"T3549","span":{"begin":12,"end":21},"obj":"RB"},{"id":"T3550","span":{"begin":22,"end":23},"obj":"-LRB-"},{"id":"T3551","span":{"begin":23,"end":25},"obj":"CD"},{"id":"T3552","span":{"begin":25,"end":26},"obj":"-RRB-"},{"id":"T3553","span":{"begin":28,"end":31},"obj":"IN"},{"id":"T3554","span":{"begin":32,"end":40},"obj":"NN"},{"id":"T3555","span":{"begin":41,"end":43},"obj":"IN"},{"id":"T3556","span":{"begin":44,"end":49},"obj":"NN"},{"id":"T3557","span":{"begin":50,"end":57},"obj":"NN"},{"id":"T3558","span":{"begin":58,"end":68},"obj":"NN"},{"id":"T3559","span":{"begin":68,"end":69},"obj":"-COMMA-"},{"id":"T3560","span":{"begin":70,"end":71},"obj":"DT"},{"id":"T3561","span":{"begin":72,"end":80},"obj":"JJ"},{"id":"T3562","span":{"begin":81,"end":95},"obj":"NN"},{"id":"T3563","span":{"begin":96,"end":101},"obj":"NN"},{"id":"T3564","span":{"begin":102,"end":105},"obj":"VB"},{"id":"T3565","span":{"begin":106,"end":115},"obj":"VB"},{"id":"T3566","span":{"begin":116,"end":118},"obj":"IN"},{"id":"T3567","span":{"begin":119,"end":128},"obj":"VB"},{"id":"T3568","span":{"begin":129,"end":139},"obj":"RB"},{"id":"T3569","span":{"begin":140,"end":141},"obj":"-LRB-"},{"id":"T3570","span":{"begin":141,"end":143},"obj":"CD"},{"id":"T3571","span":{"begin":143,"end":144},"obj":"-RRB-"},{"id":"T3572","span":{"begin":146,"end":153},"obj":"RB"},{"id":"T3573","span":{"begin":153,"end":154},"obj":"-COMMA-"},{"id":"T3574","span":{"begin":155,"end":162},"obj":"NN"}],"relations":[{"id":"R2848","pred":"arg1Of","subj":"T3548","obj":"T3549"},{"id":"R2849","pred":"arg1Of","subj":"T3549","obj":"T3550"},{"id":"R2850","pred":"arg2Of","subj":"T3551","obj":"T3550"},{"id":"R2851","pred":"arg3Of","subj":"T3552","obj":"T3550"},{"id":"R2852","pred":"arg2Of","subj":"T3554","obj":"T3553"},{"id":"R2853","pred":"arg1Of","subj":"T3554","obj":"T3555"},{"id":"R2854","pred":"arg2Of","subj":"T3558","obj":"T3555"},{"id":"R2855","pred":"arg1Of","subj":"T3558","obj":"T3556"},{"id":"R2856","pred":"arg1Of","subj":"T3558","obj":"T3557"},{"id":"R2857","pred":"arg1Of","subj":"T3563","obj":"T3560"},{"id":"R2858","pred":"arg1Of","subj":"T3563","obj":"T3561"},{"id":"R2859","pred":"arg1Of","subj":"T3563","obj":"T3562"},{"id":"R2860","pred":"arg1Of","subj":"T3563","obj":"T3564"},{"id":"R2861","pred":"arg2Of","subj":"T3563","obj":"T3565"},{"id":"R2862","pred":"arg1Of","subj":"T3565","obj":"T3553"},{"id":"R2863","pred":"arg1Of","subj":"T3565","obj":"T3559"},{"id":"R2864","pred":"arg2Of","subj":"T3565","obj":"T3564"},{"id":"R2865","pred":"arg1Of","subj":"T3565","obj":"T3566"},{"id":"R2866","pred":"arg2Of","subj":"T3567","obj":"T3566"},{"id":"R2867","pred":"arg1Of","subj":"T3567","obj":"T3568"},{"id":"R2868","pred":"arg1Of","subj":"T3568","obj":"T3569"},{"id":"R2869","pred":"arg2Of","subj":"T3570","obj":"T3569"},{"id":"R2870","pred":"arg3Of","subj":"T3571","obj":"T3569"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"e published elsewhere (28).\nFor analysis of IRF-4 protein expression, a standard immunoblotting assay was performed as described previously (29). Briefly, protein lysa"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T3904","span":{"begin":2,"end":11},"obj":"VBN"},{"id":"T3905","span":{"begin":12,"end":21},"obj":"RB"},{"id":"T3906","span":{"begin":22,"end":23},"obj":"-LRB-"},{"id":"T3907","span":{"begin":23,"end":25},"obj":"CD"},{"id":"T3908","span":{"begin":25,"end":26},"obj":"-RRB-"},{"id":"T3909","span":{"begin":26,"end":27},"obj":"."},{"id":"T3910","span":{"begin":28,"end":31},"obj":"IN"},{"id":"T3911","span":{"begin":32,"end":40},"obj":"NN"},{"id":"T3912","span":{"begin":41,"end":43},"obj":"IN"},{"id":"T3913","span":{"begin":44,"end":49},"obj":"NN"},{"id":"T3914","span":{"begin":50,"end":57},"obj":"NN"},{"id":"T3915","span":{"begin":58,"end":68},"obj":"NN"},{"id":"T3916","span":{"begin":68,"end":69},"obj":","},{"id":"T3917","span":{"begin":70,"end":71},"obj":"DT"},{"id":"T3918","span":{"begin":72,"end":80},"obj":"JJ"},{"id":"T3919","span":{"begin":81,"end":95},"obj":"NN"},{"id":"T3920","span":{"begin":96,"end":101},"obj":"NN"},{"id":"T3921","span":{"begin":102,"end":105},"obj":"VBD"},{"id":"T3922","span":{"begin":106,"end":115},"obj":"VBN"},{"id":"T3923","span":{"begin":116,"end":118},"obj":"IN"},{"id":"T3924","span":{"begin":119,"end":128},"obj":"VBN"},{"id":"T3925","span":{"begin":129,"end":139},"obj":"RB"},{"id":"T3926","span":{"begin":140,"end":141},"obj":"-LRB-"},{"id":"T3927","span":{"begin":141,"end":143},"obj":"CD"},{"id":"T3928","span":{"begin":143,"end":144},"obj":"-RRB-"},{"id":"T3929","span":{"begin":144,"end":145},"obj":"."},{"id":"T3930","span":{"begin":146,"end":153},"obj":"RB"},{"id":"T3931","span":{"begin":153,"end":154},"obj":","},{"id":"T3932","span":{"begin":155,"end":162},"obj":"NN"}],"relations":[{"id":"R3190","pred":"ROOT","subj":"T3904","obj":"T3904"},{"id":"R3191","pred":"advmod","subj":"T3905","obj":"T3904"},{"id":"R3192","pred":"punct","subj":"T3906","obj":"T3904"},{"id":"R3193","pred":"npadvmod","subj":"T3907","obj":"T3904"},{"id":"R3194","pred":"punct","subj":"T3908","obj":"T3904"},{"id":"R3195","pred":"punct","subj":"T3909","obj":"T3904"},{"id":"R3196","pred":"prep","subj":"T3910","obj":"T3922"},{"id":"R3197","pred":"pobj","subj":"T3911","obj":"T3910"},{"id":"R3198","pred":"prep","subj":"T3912","obj":"T3911"},{"id":"R3199","pred":"compound","subj":"T3913","obj":"T3915"},{"id":"R3200","pred":"compound","subj":"T3914","obj":"T3915"},{"id":"R3201","pred":"pobj","subj":"T3915","obj":"T3912"},{"id":"R3202","pred":"punct","subj":"T3916","obj":"T3922"},{"id":"R3203","pred":"det","subj":"T3917","obj":"T3920"},{"id":"R3204","pred":"amod","subj":"T3918","obj":"T3920"},{"id":"R3205","pred":"compound","subj":"T3919","obj":"T3920"},{"id":"R3206","pred":"nsubjpass","subj":"T3920","obj":"T3922"},{"id":"R3207","pred":"auxpass","subj":"T3921","obj":"T3922"},{"id":"R3208","pred":"ROOT","subj":"T3922","obj":"T3922"},{"id":"R3209","pred":"mark","subj":"T3923","obj":"T3924"},{"id":"R3210","pred":"advcl","subj":"T3924","obj":"T3922"},{"id":"R3211","pred":"advmod","subj":"T3925","obj":"T3924"},{"id":"R3212","pred":"punct","subj":"T3926","obj":"T3927"},{"id":"R3213","pred":"npadvmod","subj":"T3927","obj":"T3924"},{"id":"R3214","pred":"punct","subj":"T3928","obj":"T3922"},{"id":"R3215","pred":"punct","subj":"T3929","obj":"T3922"}],"text":"e published elsewhere (28).\nFor analysis of IRF-4 protein expression, a standard immunoblotting assay was performed as described previously (29). Briefly, protein lysa"}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T4315","span":{"begin":44,"end":57},"obj":"Protein"},{"id":"T4316","span":{"begin":58,"end":68},"obj":"Gene_expression"}],"relations":[{"id":"R3509","pred":"themeOf","subj":"T4315","obj":"T4316"}],"text":"e published elsewhere (28).\nFor analysis of IRF-4 protein expression, a standard immunoblotting assay was performed as described previously (29). Briefly, protein lysa"}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T3426","span":{"begin":58,"end":68},"obj":"Gene_expression"},{"id":"T3437","span":{"begin":44,"end":49},"obj":"Protein"}],"relations":[{"id":"R2738","pred":"themeOf","subj":"T3437","obj":"T3426"}],"attributes":[{"id":"M74","pred":"Speculation","subj":"T3426","obj":"true"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"e published elsewhere (28).\nFor analysis of IRF-4 protein expression, a standard immunoblotting assay was performed as described previously (29). Briefly, protein lysa"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T3798","span":{"begin":44,"end":49},"obj":"Q15306"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"e published elsewhere (28).\nFor analysis of IRF-4 protein expression, a standard immunoblotting assay was performed as described previously (29). Briefly, protein lysa"}
test2
{"project":"test2","denotations":[{"id":"T3402","span":{"begin":44,"end":49},"obj":"Protein"},{"id":"T3403","span":{"begin":58,"end":68},"obj":"Gene_expression"}],"relations":[{"id":"R2733","pred":"themeOf","subj":"T3402","obj":"T3403"}],"text":"e published elsewhere (28).\nFor analysis of IRF-4 protein expression, a standard immunoblotting assay was performed as described previously (29). Briefly, protein lysa"}