> top > docs > PMC:1310901 > spans > 6990-7121 > annotations

PMC:1310901 / 6990-7121 JSONTXT

Annnotations TAB JSON ListView MergeView

bionlp-st-ge-2016-reference-eval

Id Subject Object Predicate Lexical cue
T4322 62-76 Transcription denotes RNA expression
T4323 62-76 Transcription denotes RNA expression
T4337 90-95 Protein denotes IRF-4
T4338 119-126 Protein denotes β-actin
R3515 T4337 T4322 themeOf IRF-4,RNA expression
R3516 T4338 T4323 themeOf β-actin,RNA expression

events-check-again

Id Subject Object Predicate Lexical cue
T4271 62-76 Transcription denotes RNA expression
T4272 62-76 Transcription denotes RNA expression
T4273 90-95 Protein denotes IRF-4
T4274 119-126 Protein denotes β-actin
R3489 T4273 T4271 themeOf IRF-4,RNA expression
R3490 T4274 T4272 themeOf β-actin,RNA expression

2_test

Id Subject Object Predicate Lexical cue
16396836-9414265-76538181 57-59 9414265 denotes 27

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3481 0-3 NN denotes RNA
T3482 4-7 VB denotes was
T3483 8-12 VB denotes used
T3484 13-16 IN denotes for
T3485 17-21 NN denotes cDNA
T3486 22-31 NN denotes synthesis
T3487 32-34 IN denotes as
T3488 35-44 VB denotes described
T3489 45-55 RB denotes previously
T3490 56-57 -LRB- denotes (
T3491 57-59 CD denotes 27
T3492 59-60 -RRB- denotes )
T3493 62-65 NN denotes RNA
T3494 66-76 NN denotes expression
T3495 77-85 NN denotes analysis
T3496 86-89 IN denotes for
T3497 90-95 NN denotes IRF-4
T3498 96-99 CC denotes and
T3499 100-103 DT denotes the
T3500 104-113 NN denotes reference
T3501 114-118 NN denotes gene
T3502 119-126 NN denotes β-actin
T3503 127-130 VB denotes was
R2782 T3483 T3482 arg2Of used,was
R2783 T3483 T3484 arg1Of used,for
R2784 T3486 T3484 arg2Of synthesis,for
R2785 T3486 T3485 arg1Of synthesis,cDNA
R2786 T3487 T3483 arg3Of as,used
R2787 T3488 T3487 arg2Of described,as
R2788 T3488 T3489 arg1Of described,previously
R2789 T3489 T3490 arg1Of previously,(
R2790 T3491 T3490 arg2Of 27,(
R2791 T3492 T3490 arg3Of ),(
R2792 T3495 T3493 arg1Of analysis,RNA
R2793 T3495 T3494 arg1Of analysis,expression
R2794 T3495 T3496 arg1Of analysis,for
R2795 T3495 T3498 arg1Of analysis,and
R2796 T3497 T3496 arg2Of IRF-4,for
R2797 T3498 T3503 arg1Of and,was
R2799 T3502 T3498 arg2Of β-actin,and
R2800 T3502 T3499 arg1Of β-actin,the
R2801 T3502 T3500 arg1Of β-actin,reference
R2802 T3502 T3501 arg1Of β-actin,gene

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3834 0-3 NNP denotes RNA
T3835 4-7 VBD denotes was
T3836 8-12 VBN denotes used
T3837 13-16 IN denotes for
T3838 17-21 NNP denotes cDNA
T3839 22-31 NN denotes synthesis
T3840 32-34 IN denotes as
T3841 35-44 VBN denotes described
T3842 45-55 RB denotes previously
T3843 56-57 -LRB- denotes (
T3844 57-59 CD denotes 27
T3845 59-60 -RRB- denotes )
T3846 60-61 . denotes .
T3847 62-65 NNP denotes RNA
T3848 66-76 NN denotes expression
T3849 77-85 NN denotes analysis
T3850 86-89 IN denotes for
T3851 90-95 NNP denotes IRF-4
T3852 96-99 CC denotes and
T3853 100-103 DT denotes the
T3854 104-113 NN denotes reference
T3855 114-118 NN denotes gene
T3856 119-126 NN denotes β-actin
T3857 127-130 VBD denotes was
R3121 T3835 T3836 auxpass was,used
R3122 T3836 T3836 ROOT used,used
R3123 T3837 T3836 prep for,used
R3124 T3838 T3839 compound cDNA,synthesis
R3125 T3839 T3837 pobj synthesis,for
R3126 T3840 T3841 mark as,described
R3127 T3841 T3836 advcl described,used
R3128 T3842 T3841 advmod previously,described
R3129 T3843 T3844 punct (,27
R3130 T3844 T3841 npadvmod 27,described
R3131 T3845 T3836 punct ),used
R3132 T3846 T3836 punct .,used
R3133 T3847 T3849 compound RNA,analysis
R3134 T3848 T3849 compound expression,analysis
R3136 T3850 T3849 prep for,analysis
R3137 T3851 T3850 pobj IRF-4,for
R3138 T3852 T3851 cc and,IRF-4
R3139 T3853 T3855 det the,gene
R3140 T3854 T3855 compound reference,gene
R3141 T3855 T3856 compound gene,β-actin

GO-BP

Id Subject Object Predicate Lexical cue
T3422 22-31 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T4296 90-95 Protein denotes IRF-4
T4297 104-120 Protein denotes reference gene β
T4298 121-126 Protein denotes actin

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T3427 62-76 Transcription denotes RNA expression
T3428 62-76 Transcription denotes RNA expression
T3442 90-95 Protein denotes IRF-4
T3443 119-126 Protein denotes β-actin
R2741 T3442 T3427 themeOf IRF-4,RNA expression
R2742 T3443 T3428 themeOf β-actin,RNA expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3788 90-95 Q15306 denotes IRF-4
T3789 119-126 P60709 denotes β-actin

test2

Id Subject Object Predicate Lexical cue Speculation
T3391 62-76 Transcription denotes RNA expression
T3392 90-95 Protein denotes IRF-4 true
T3393 119-126 Protein denotes β-actin true
R2724 T3392 T3391 themeOf IRF-4,RNA expression
R2725 T3393 T3391 themeOf β-actin,RNA expression