PMC:1310901 / 6830-6964 JSONTXT

{"project":"bionlp-st-ge-2016-reference-eval","denotations":[{"id":"T4319","span":{"begin":21,"end":36},"obj":"Transcription"},{"id":"T4330","span":{"begin":15,"end":20},"obj":"Protein"}],"relations":[{"id":"R3510","pred":"themeOf","subj":"T4330","obj":"T4319"}],"text":"To analyze the IRF-4 transcriptional level, RNA was extracted from cells using the commercial RNAzol-kit (Paesel, Frankfurt, Germany)."}

{"project":"events-check-again","denotations":[{"id":"T4269","span":{"begin":15,"end":20},"obj":"Protein"},{"id":"T4270","span":{"begin":21,"end":36},"obj":"Transcription"}],"relations":[{"id":"R3488","pred":"themeOf","subj":"T4269","obj":"T4270"}],"text":"To analyze the IRF-4 transcriptional level, RNA was extracted from cells using the commercial RNAzol-kit (Paesel, Frankfurt, Germany)."}

{"project":"GO-CC","denotations":[{"id":"T4180","span":{"begin":67,"end":72},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"To analyze the IRF-4 transcriptional level, RNA was extracted from cells using the commercial RNAzol-kit (Paesel, Frankfurt, Germany)."}

{"project":"sentences","denotations":[{"id":"T3409","span":{"begin":0,"end":134},"obj":"Sentence"},{"id":"T52","span":{"begin":0,"end":134},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"To analyze the IRF-4 transcriptional level, RNA was extracted from cells using the commercial RNAzol-kit (Paesel, Frankfurt, Germany)."}

{"project":"pmc-enju-pas","denotations":[{"id":"T3452","span":{"begin":0,"end":2},"obj":"TO"},{"id":"T3453","span":{"begin":3,"end":10},"obj":"VB"},{"id":"T3454","span":{"begin":11,"end":14},"obj":"DT"},{"id":"T3455","span":{"begin":15,"end":20},"obj":"NN"},{"id":"T3456","span":{"begin":21,"end":36},"obj":"JJ"},{"id":"T3457","span":{"begin":37,"end":42},"obj":"NN"},{"id":"T3458","span":{"begin":42,"end":43},"obj":"-COMMA-"},{"id":"T3459","span":{"begin":44,"end":47},"obj":"NN"},{"id":"T3460","span":{"begin":48,"end":51},"obj":"VB"},{"id":"T3461","span":{"begin":52,"end":61},"obj":"VB"},{"id":"T3462","span":{"begin":62,"end":66},"obj":"IN"},{"id":"T3463","span":{"begin":67,"end":72},"obj":"NN"},{"id":"T3464","span":{"begin":73,"end":78},"obj":"VB"},{"id":"T3465","span":{"begin":79,"end":82},"obj":"DT"},{"id":"T3466","span":{"begin":83,"end":93},"obj":"JJ"},{"id":"T3467","span":{"begin":94,"end":104},"obj":"NN"},{"id":"T3468","span":{"begin":105,"end":106},"obj":"-LRB-"},{"id":"T3469","span":{"begin":106,"end":112},"obj":"NNP"},{"id":"T3470","span":{"begin":112,"end":113},"obj":"-COMMA-"},{"id":"T3471","span":{"begin":114,"end":123},"obj":"NNP"},{"id":"T3472","span":{"begin":123,"end":124},"obj":"-COMMA-"},{"id":"T3473","span":{"begin":125,"end":132},"obj":"NNP"},{"id":"T3474","span":{"begin":132,"end":133},"obj":"-RRB-"}],"relations":[{"id":"R2750","pred":"arg1Of","subj":"T3453","obj":"T3452"},{"id":"R2751","pred":"arg2Of","subj":"T3457","obj":"T3453"},{"id":"R2752","pred":"arg1Of","subj":"T3457","obj":"T3454"},{"id":"R2753","pred":"arg1Of","subj":"T3457","obj":"T3455"},{"id":"R2754","pred":"arg1Of","subj":"T3457","obj":"T3456"},{"id":"R2755","pred":"arg1Of","subj":"T3459","obj":"T3453"},{"id":"R2756","pred":"arg1Of","subj":"T3459","obj":"T3460"},{"id":"R2757","pred":"arg2Of","subj":"T3459","obj":"T3461"},{"id":"R2758","pred":"modOf","subj":"T3461","obj":"T3452"},{"id":"R2759","pred":"arg1Of","subj":"T3461","obj":"T3458"},{"id":"R2760","pred":"arg2Of","subj":"T3461","obj":"T3460"},{"id":"R2761","pred":"arg1Of","subj":"T3461","obj":"T3462"},{"id":"R2762","pred":"arg2Of","subj":"T3463","obj":"T3462"},{"id":"R2763","pred":"arg1Of","subj":"T3463","obj":"T3464"},{"id":"R2764","pred":"arg2Of","subj":"T3467","obj":"T3464"},{"id":"R2765","pred":"arg1Of","subj":"T3467","obj":"T3465"},{"id":"R2766","pred":"arg1Of","subj":"T3467","obj":"T3466"},{"id":"R2767","pred":"arg1Of","subj":"T3467","obj":"T3468"},{"id":"R2768","pred":"arg1Of","subj":"T3469","obj":"T3470"},{"id":"R2769","pred":"arg2Of","subj":"T3470","obj":"T3468"},{"id":"R2770","pred":"arg1Of","subj":"T3470","obj":"T3472"},{"id":"R2771","pred":"arg2Of","subj":"T3471","obj":"T3470"},{"id":"R2772","pred":"arg2Of","subj":"T3473","obj":"T3472"},{"id":"R2773","pred":"arg3Of","subj":"T3474","obj":"T3468"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"To analyze the IRF-4 transcriptional level, RNA was extracted from cells using the commercial RNAzol-kit (Paesel, Frankfurt, Germany)."}

{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T3804","span":{"begin":0,"end":2},"obj":"TO"},{"id":"T3805","span":{"begin":3,"end":10},"obj":"VB"},{"id":"T3806","span":{"begin":11,"end":14},"obj":"DT"},{"id":"T3807","span":{"begin":15,"end":20},"obj":"NN"},{"id":"T3808","span":{"begin":21,"end":36},"obj":"JJ"},{"id":"T3809","span":{"begin":37,"end":42},"obj":"NN"},{"id":"T3810","span":{"begin":42,"end":43},"obj":","},{"id":"T3811","span":{"begin":44,"end":47},"obj":"NNP"},{"id":"T3812","span":{"begin":48,"end":51},"obj":"VBD"},{"id":"T3813","span":{"begin":52,"end":61},"obj":"VBN"},{"id":"T3814","span":{"begin":62,"end":66},"obj":"IN"},{"id":"T3815","span":{"begin":67,"end":72},"obj":"NNS"},{"id":"T3816","span":{"begin":73,"end":78},"obj":"VBG"},{"id":"T3817","span":{"begin":79,"end":82},"obj":"DT"},{"id":"T3818","span":{"begin":83,"end":93},"obj":"JJ"},{"id":"T3819","span":{"begin":94,"end":104},"obj":"NN"},{"id":"T3820","span":{"begin":105,"end":106},"obj":"-LRB-"},{"id":"T3821","span":{"begin":106,"end":112},"obj":"NNP"},{"id":"T3822","span":{"begin":112,"end":113},"obj":","},{"id":"T3823","span":{"begin":114,"end":123},"obj":"NNP"},{"id":"T3824","span":{"begin":123,"end":124},"obj":","},{"id":"T3825","span":{"begin":125,"end":132},"obj":"NNP"},{"id":"T3826","span":{"begin":132,"end":133},"obj":"-RRB-"},{"id":"T3827","span":{"begin":133,"end":134},"obj":"."}],"relations":[{"id":"R3090","pred":"aux","subj":"T3804","obj":"T3805"},{"id":"R3091","pred":"advcl","subj":"T3805","obj":"T3813"},{"id":"R3092","pred":"det","subj":"T3806","obj":"T3809"},{"id":"R3093","pred":"nmod","subj":"T3807","obj":"T3809"},{"id":"R3094","pred":"amod","subj":"T3808","obj":"T3809"},{"id":"R3095","pred":"dobj","subj":"T3809","obj":"T3805"},{"id":"R3096","pred":"punct","subj":"T3810","obj":"T3813"},{"id":"R3097","pred":"nsubjpass","subj":"T3811","obj":"T3813"},{"id":"R3098","pred":"auxpass","subj":"T3812","obj":"T3813"},{"id":"R3099","pred":"ROOT","subj":"T3813","obj":"T3813"},{"id":"R3100","pred":"prep","subj":"T3814","obj":"T3813"},{"id":"R3101","pred":"pobj","subj":"T3815","obj":"T3814"},{"id":"R3102","pred":"advcl","subj":"T3816","obj":"T3813"},{"id":"R3103","pred":"det","subj":"T3817","obj":"T3819"},{"id":"R3104","pred":"amod","subj":"T3818","obj":"T3819"},{"id":"R3105","pred":"dobj","subj":"T3819","obj":"T3816"},{"id":"R3106","pred":"punct","subj":"T3820","obj":"T3819"},{"id":"R3107","pred":"appos","subj":"T3821","obj":"T3819"},{"id":"R3108","pred":"punct","subj":"T3822","obj":"T3821"},{"id":"R3109","pred":"npadvmod","subj":"T3823","obj":"T3821"},{"id":"R3110","pred":"punct","subj":"T3824","obj":"T3823"},{"id":"R3111","pred":"conj","subj":"T3825","obj":"T3823"},{"id":"R3112","pred":"punct","subj":"T3826","obj":"T3821"},{"id":"R3113","pred":"punct","subj":"T3827","obj":"T3813"}],"text":"To analyze the IRF-4 transcriptional level, RNA was extracted from cells using the commercial RNAzol-kit (Paesel, Frankfurt, Germany)."}

{"project":"GO-BP","denotations":[{"id":"T3421","span":{"begin":21,"end":36},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"To analyze the IRF-4 transcriptional level, RNA was extracted from cells using the commercial RNAzol-kit (Paesel, Frankfurt, Germany)."}

{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T4295","span":{"begin":15,"end":20},"obj":"Protein"}],"text":"To analyze the IRF-4 transcriptional level, RNA was extracted from cells using the commercial RNAzol-kit (Paesel, Frankfurt, Germany)."}

{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T3424","span":{"begin":21,"end":36},"obj":"Transcription"},{"id":"T3435","span":{"begin":15,"end":20},"obj":"Protein"}],"relations":[{"id":"R2736","pred":"themeOf","subj":"T3435","obj":"T3424"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"To analyze the IRF-4 transcriptional level, RNA was extracted from cells using the commercial RNAzol-kit (Paesel, Frankfurt, Germany)."}

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T3787","span":{"begin":15,"end":20},"obj":"Q15306"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"To analyze the IRF-4 transcriptional level, RNA was extracted from cells using the commercial RNAzol-kit (Paesel, Frankfurt, Germany)."}

{"project":"test2","denotations":[{"id":"T3389","span":{"begin":15,"end":20},"obj":"Protein"},{"id":"T3390","span":{"begin":21,"end":36},"obj":"Transcription"}],"relations":[{"id":"R2723","pred":"themeOf","subj":"T3389","obj":"T3390"}],"text":"To analyze the IRF-4 transcriptional level, RNA was extracted from cells using the commercial RNAzol-kit (Paesel, Frankfurt, Germany)."}