PMC:1310901 / 667-823
Annnotations
bionlp-st-ge-2016-reference-eval
{"project":"bionlp-st-ge-2016-reference-eval","denotations":[{"id":"T876","span":{"begin":2,"end":7},"obj":"Protein"},{"id":"T877","span":{"begin":64,"end":74},"obj":"Regulation"},{"id":"T878","span":{"begin":78,"end":83},"obj":"Protein"},{"id":"T879","span":{"begin":84,"end":94},"obj":"Gene_expression"}],"relations":[{"id":"R634","pred":"themeOf","subj":"T878","obj":"T879"},{"id":"R635","pred":"themeOf","subj":"T879","obj":"T877"}],"text":"r IRF-4 promoter methylation or mutation may be involved in the regulation of IRF-4 expression in leukemia cells. Whereas promoter mutations or structural r"}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T812","span":{"begin":2,"end":7},"obj":"Protein"},{"id":"T813","span":{"begin":64,"end":74},"obj":"Regulation"},{"id":"T814","span":{"begin":78,"end":83},"obj":"Protein"},{"id":"T815","span":{"begin":84,"end":94},"obj":"Gene_expression"}],"relations":[{"id":"R601","pred":"themeOf","subj":"T814","obj":"T815"},{"id":"R602","pred":"themeOf","subj":"T815","obj":"T813"}],"attributes":[{"id":"M20","pred":"Speculation","subj":"T813","obj":"true"}],"text":"r IRF-4 promoter methylation or mutation may be involved in the regulation of IRF-4 expression in leukemia cells. Whereas promoter mutations or structural r"}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T699","span":{"begin":107,"end":112},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"r IRF-4 promoter methylation or mutation may be involved in the regulation of IRF-4 expression in leukemia cells. Whereas promoter mutations or structural r"}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T232","span":{"begin":2,"end":7},"obj":"NN"},{"id":"T233","span":{"begin":8,"end":16},"obj":"NN"},{"id":"T234","span":{"begin":17,"end":28},"obj":"NN"},{"id":"T235","span":{"begin":29,"end":31},"obj":"CC"},{"id":"T236","span":{"begin":32,"end":40},"obj":"NN"},{"id":"T237","span":{"begin":41,"end":44},"obj":"MD"},{"id":"T238","span":{"begin":45,"end":47},"obj":"VB"},{"id":"T239","span":{"begin":48,"end":56},"obj":"VB"},{"id":"T240","span":{"begin":57,"end":59},"obj":"IN"},{"id":"T241","span":{"begin":60,"end":63},"obj":"DT"},{"id":"T242","span":{"begin":64,"end":74},"obj":"NN"},{"id":"T243","span":{"begin":75,"end":77},"obj":"IN"},{"id":"T244","span":{"begin":78,"end":83},"obj":"NN"},{"id":"T245","span":{"begin":84,"end":94},"obj":"NN"},{"id":"T246","span":{"begin":95,"end":97},"obj":"IN"},{"id":"T247","span":{"begin":98,"end":106},"obj":"NN"},{"id":"T248","span":{"begin":107,"end":112},"obj":"NN"},{"id":"T249","span":{"begin":114,"end":121},"obj":"IN"},{"id":"T250","span":{"begin":122,"end":130},"obj":"NN"},{"id":"T251","span":{"begin":131,"end":140},"obj":"NN"},{"id":"T252","span":{"begin":141,"end":143},"obj":"CC"},{"id":"T253","span":{"begin":144,"end":154},"obj":"JJ"}],"relations":[{"id":"R144","pred":"arg1Of","subj":"T234","obj":"T232"},{"id":"R145","pred":"arg1Of","subj":"T234","obj":"T233"},{"id":"R146","pred":"arg1Of","subj":"T234","obj":"T235"},{"id":"R147","pred":"arg1Of","subj":"T235","obj":"T237"},{"id":"R148","pred":"arg1Of","subj":"T235","obj":"T238"},{"id":"R149","pred":"arg2Of","subj":"T235","obj":"T239"},{"id":"R150","pred":"arg2Of","subj":"T236","obj":"T235"},{"id":"R153","pred":"arg2Of","subj":"T239","obj":"T237"},{"id":"R154","pred":"arg2Of","subj":"T239","obj":"T238"},{"id":"R155","pred":"arg1Of","subj":"T239","obj":"T240"},{"id":"R156","pred":"arg2Of","subj":"T242","obj":"T240"},{"id":"R157","pred":"arg1Of","subj":"T242","obj":"T241"},{"id":"R158","pred":"arg1Of","subj":"T242","obj":"T243"},{"id":"R159","pred":"arg2Of","subj":"T245","obj":"T243"},{"id":"R160","pred":"arg1Of","subj":"T245","obj":"T244"},{"id":"R161","pred":"arg1Of","subj":"T245","obj":"T246"},{"id":"R162","pred":"arg2Of","subj":"T248","obj":"T246"},{"id":"R163","pred":"arg1Of","subj":"T248","obj":"T247"},{"id":"R164","pred":"arg1Of","subj":"T251","obj":"T250"},{"id":"R165","pred":"arg1Of","subj":"T251","obj":"T252"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"r IRF-4 promoter methylation or mutation may be involved in the regulation of IRF-4 expression in leukemia cells. Whereas promoter mutations or structural r"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T525","span":{"begin":2,"end":7},"obj":"NN"},{"id":"T526","span":{"begin":8,"end":16},"obj":"NN"},{"id":"T527","span":{"begin":17,"end":28},"obj":"NN"},{"id":"T528","span":{"begin":29,"end":31},"obj":"CC"},{"id":"T529","span":{"begin":32,"end":40},"obj":"NN"},{"id":"T530","span":{"begin":41,"end":44},"obj":"MD"},{"id":"T531","span":{"begin":45,"end":47},"obj":"VB"},{"id":"T532","span":{"begin":48,"end":56},"obj":"VBN"},{"id":"T533","span":{"begin":57,"end":59},"obj":"IN"},{"id":"T534","span":{"begin":60,"end":63},"obj":"DT"},{"id":"T535","span":{"begin":64,"end":74},"obj":"NN"},{"id":"T536","span":{"begin":75,"end":77},"obj":"IN"},{"id":"T537","span":{"begin":78,"end":83},"obj":"NN"},{"id":"T538","span":{"begin":84,"end":94},"obj":"NN"},{"id":"T539","span":{"begin":95,"end":97},"obj":"IN"},{"id":"T540","span":{"begin":98,"end":106},"obj":"NN"},{"id":"T541","span":{"begin":107,"end":112},"obj":"NNS"},{"id":"T542","span":{"begin":112,"end":113},"obj":"."},{"id":"T543","span":{"begin":114,"end":121},"obj":"IN"},{"id":"T544","span":{"begin":122,"end":130},"obj":"NN"},{"id":"T545","span":{"begin":131,"end":140},"obj":"NNS"},{"id":"T546","span":{"begin":141,"end":143},"obj":"CC"},{"id":"T547","span":{"begin":144,"end":154},"obj":"JJ"}],"relations":[{"id":"R414","pred":"compound","subj":"T525","obj":"T527"},{"id":"R415","pred":"compound","subj":"T526","obj":"T527"},{"id":"R416","pred":"nsubjpass","subj":"T527","obj":"T532"},{"id":"R417","pred":"cc","subj":"T528","obj":"T527"},{"id":"R418","pred":"conj","subj":"T529","obj":"T527"},{"id":"R419","pred":"aux","subj":"T530","obj":"T532"},{"id":"R420","pred":"auxpass","subj":"T531","obj":"T532"},{"id":"R422","pred":"prep","subj":"T533","obj":"T532"},{"id":"R423","pred":"det","subj":"T534","obj":"T535"},{"id":"R424","pred":"pobj","subj":"T535","obj":"T533"},{"id":"R425","pred":"prep","subj":"T536","obj":"T535"},{"id":"R426","pred":"compound","subj":"T537","obj":"T538"},{"id":"R427","pred":"pobj","subj":"T538","obj":"T536"},{"id":"R428","pred":"prep","subj":"T539","obj":"T535"},{"id":"R429","pred":"compound","subj":"T540","obj":"T541"},{"id":"R430","pred":"pobj","subj":"T541","obj":"T539"},{"id":"R433","pred":"compound","subj":"T544","obj":"T545"},{"id":"R435","pred":"cc","subj":"T546","obj":"T545"}],"text":"r IRF-4 promoter methylation or mutation may be involved in the regulation of IRF-4 expression in leukemia cells. Whereas promoter mutations or structural r"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T115","span":{"begin":64,"end":74},"obj":"http://purl.obolibrary.org/obo/GO_0065007"},{"id":"T123","span":{"begin":17,"end":28},"obj":"http://purl.obolibrary.org/obo/GO_0032259"}],"text":"r IRF-4 promoter methylation or mutation may be involved in the regulation of IRF-4 expression in leukemia cells. Whereas promoter mutations or structural r"}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T847","span":{"begin":2,"end":16},"obj":"Protein"},{"id":"T848","span":{"begin":78,"end":83},"obj":"Protein"},{"id":"T849","span":{"begin":84,"end":94},"obj":"Gene_expression"},{"id":"T850","span":{"begin":64,"end":74},"obj":"Regulation"}],"relations":[{"id":"R619","pred":"themeOf","subj":"T848","obj":"T849"},{"id":"R620","pred":"themeOf","subj":"T849","obj":"T850"}],"text":"r IRF-4 promoter methylation or mutation may be involved in the regulation of IRF-4 expression in leukemia cells. Whereas promoter mutations or structural r"}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T79","span":{"begin":2,"end":7},"obj":"Protein"},{"id":"T80","span":{"begin":64,"end":74},"obj":"Regulation"},{"id":"T81","span":{"begin":78,"end":83},"obj":"Protein"},{"id":"T82","span":{"begin":84,"end":94},"obj":"Gene_expression"}],"relations":[{"id":"R652","pred":"themeOf","subj":"T81","obj":"T82"},{"id":"R653","pred":"themeOf","subj":"T82","obj":"T80"}],"attributes":[{"id":"M25","pred":"Speculation","subj":"T80","obj":"true"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"r IRF-4 promoter methylation or mutation may be involved in the regulation of IRF-4 expression in leukemia cells. Whereas promoter mutations or structural r"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T401","span":{"begin":2,"end":7},"obj":"Q15306"},{"id":"T402","span":{"begin":78,"end":83},"obj":"Q15306"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"r IRF-4 promoter methylation or mutation may be involved in the regulation of IRF-4 expression in leukemia cells. Whereas promoter mutations or structural r"}
test2
{"project":"test2","denotations":[{"id":"T43","span":{"begin":2,"end":7},"obj":"Protein"},{"id":"T44","span":{"begin":64,"end":74},"obj":"Regulation"},{"id":"T45","span":{"begin":78,"end":83},"obj":"Protein"},{"id":"T46","span":{"begin":84,"end":94},"obj":"Gene_expression"}],"relations":[{"id":"R23","pred":"themeOf","subj":"T45","obj":"T46"},{"id":"R24","pred":"themeOf","subj":"T46","obj":"T44"}],"attributes":[{"id":"M8","pred":"Negation","subj":"T44","obj":"true"}],"text":"r IRF-4 promoter methylation or mutation may be involved in the regulation of IRF-4 expression in leukemia cells. Whereas promoter mutations or structural r"}