PMC:1310901 / 4909-5020
Annnotations
bionlp-st-ge-2016-reference-eval
{"project":"bionlp-st-ge-2016-reference-eval","denotations":[{"id":"T2657","span":{"begin":39,"end":49},"obj":"Gene_expression"},{"id":"T2658","span":{"begin":50,"end":59},"obj":"Negative_regulation"},{"id":"T2690","span":{"begin":28,"end":33},"obj":"Protein"},{"id":"T2692","span":{"begin":95,"end":100},"obj":"Protein"}],"relations":[{"id":"R2076","pred":"themeOf","subj":"T2657","obj":"T2658"},{"id":"R2105","pred":"themeOf","subj":"T2690","obj":"T2657"}],"text":"k, we studied mechanisms of IRF-4 gene expression silencing in leukemic cells. We analyzed the IRF-4 promoter r"}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T2558","span":{"begin":28,"end":33},"obj":"Protein"},{"id":"T2559","span":{"begin":39,"end":49},"obj":"Gene_expression"},{"id":"T2560","span":{"begin":50,"end":59},"obj":"Negative_regulation"},{"id":"T2561","span":{"begin":95,"end":100},"obj":"Protein"}],"relations":[{"id":"R2043","pred":"themeOf","subj":"T2558","obj":"T2559"},{"id":"R2045","pred":"themeOf","subj":"T2559","obj":"T2560"}],"text":"k, we studied mechanisms of IRF-4 gene expression silencing in leukemic cells. We analyzed the IRF-4 promoter r"}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T2363","span":{"begin":72,"end":77},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"k, we studied mechanisms of IRF-4 gene expression silencing in leukemic cells. We analyzed the IRF-4 promoter r"}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T1643","span":{"begin":1,"end":2},"obj":"-COMMA-"},{"id":"T1644","span":{"begin":3,"end":5},"obj":"PRP"},{"id":"T1645","span":{"begin":6,"end":13},"obj":"VB"},{"id":"T1646","span":{"begin":14,"end":24},"obj":"NN"},{"id":"T1647","span":{"begin":25,"end":27},"obj":"IN"},{"id":"T1648","span":{"begin":28,"end":33},"obj":"NN"},{"id":"T1649","span":{"begin":34,"end":38},"obj":"NN"},{"id":"T1650","span":{"begin":39,"end":49},"obj":"NN"},{"id":"T1651","span":{"begin":50,"end":59},"obj":"NN"},{"id":"T1652","span":{"begin":60,"end":62},"obj":"IN"},{"id":"T1653","span":{"begin":63,"end":71},"obj":"JJ"},{"id":"T1654","span":{"begin":72,"end":77},"obj":"NN"},{"id":"T1655","span":{"begin":79,"end":81},"obj":"PRP"},{"id":"T1656","span":{"begin":82,"end":90},"obj":"VB"},{"id":"T1657","span":{"begin":91,"end":94},"obj":"DT"},{"id":"T1658","span":{"begin":95,"end":100},"obj":"NN"},{"id":"T1659","span":{"begin":101,"end":109},"obj":"NN"}],"relations":[{"id":"R1318","pred":"arg1Of","subj":"T1644","obj":"T1645"},{"id":"R1320","pred":"arg1Of","subj":"T1645","obj":"T1643"},{"id":"R1321","pred":"arg1Of","subj":"T1645","obj":"T1652"},{"id":"R1322","pred":"arg2Of","subj":"T1646","obj":"T1645"},{"id":"R1323","pred":"arg1Of","subj":"T1646","obj":"T1647"},{"id":"R1324","pred":"arg2Of","subj":"T1651","obj":"T1647"},{"id":"R1325","pred":"arg1Of","subj":"T1651","obj":"T1648"},{"id":"R1326","pred":"arg1Of","subj":"T1651","obj":"T1649"},{"id":"R1327","pred":"arg1Of","subj":"T1651","obj":"T1650"},{"id":"R1328","pred":"arg2Of","subj":"T1654","obj":"T1652"},{"id":"R1329","pred":"arg1Of","subj":"T1654","obj":"T1653"},{"id":"R1330","pred":"arg1Of","subj":"T1655","obj":"T1656"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"k, we studied mechanisms of IRF-4 gene expression silencing in leukemic cells. We analyzed the IRF-4 promoter r"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T2294","span":{"begin":1,"end":2},"obj":","},{"id":"T2295","span":{"begin":3,"end":5},"obj":"PRP"},{"id":"T2296","span":{"begin":6,"end":13},"obj":"VBD"},{"id":"T2297","span":{"begin":14,"end":24},"obj":"NNS"},{"id":"T2298","span":{"begin":25,"end":27},"obj":"IN"},{"id":"T2299","span":{"begin":28,"end":33},"obj":"NN"},{"id":"T2300","span":{"begin":34,"end":38},"obj":"NN"},{"id":"T2301","span":{"begin":39,"end":49},"obj":"NN"},{"id":"T2302","span":{"begin":50,"end":59},"obj":"VBG"},{"id":"T2303","span":{"begin":60,"end":62},"obj":"IN"},{"id":"T2304","span":{"begin":63,"end":71},"obj":"JJ"},{"id":"T2305","span":{"begin":72,"end":77},"obj":"NNS"},{"id":"T2306","span":{"begin":77,"end":78},"obj":"."},{"id":"T2307","span":{"begin":79,"end":81},"obj":"PRP"},{"id":"T2308","span":{"begin":82,"end":90},"obj":"VBD"},{"id":"T2309","span":{"begin":91,"end":94},"obj":"DT"},{"id":"T2310","span":{"begin":95,"end":100},"obj":"NN"},{"id":"T2311","span":{"begin":101,"end":109},"obj":"NN"}],"relations":[{"id":"R1882","pred":"punct","subj":"T2294","obj":"T2296"},{"id":"R1883","pred":"nsubj","subj":"T2295","obj":"T2296"},{"id":"R1885","pred":"ROOT","subj":"T2296","obj":"T2296"},{"id":"R1886","pred":"dobj","subj":"T2297","obj":"T2296"},{"id":"R1887","pred":"prep","subj":"T2298","obj":"T2297"},{"id":"R1889","pred":"amod","subj":"T2299","obj":"T2301"},{"id":"R1890","pred":"compound","subj":"T2300","obj":"T2301"},{"id":"R1891","pred":"pobj","subj":"T2301","obj":"T2298"},{"id":"R1893","pred":"acl","subj":"T2302","obj":"T2301"},{"id":"R1894","pred":"prep","subj":"T2303","obj":"T2302"},{"id":"R1895","pred":"amod","subj":"T2304","obj":"T2305"},{"id":"R1897","pred":"pobj","subj":"T2305","obj":"T2303"},{"id":"R1898","pred":"punct","subj":"T2306","obj":"T2296"},{"id":"R1899","pred":"nsubj","subj":"T2307","obj":"T2308"},{"id":"R1901","pred":"ROOT","subj":"T2308","obj":"T2308"}],"text":"k, we studied mechanisms of IRF-4 gene expression silencing in leukemic cells. We analyzed the IRF-4 promoter r"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T1103","span":{"begin":34,"end":49},"obj":"http://purl.obolibrary.org/obo/GO_0010467"}],"text":"k, we studied mechanisms of IRF-4 gene expression silencing in leukemic cells. We analyzed the IRF-4 promoter r"}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T2645","span":{"begin":28,"end":38},"obj":"Protein"},{"id":"T2646","span":{"begin":39,"end":49},"obj":"Gene_expression"},{"id":"T2647","span":{"begin":50,"end":59},"obj":"Negative_regulation"}],"relations":[{"id":"R2125","pred":"themeOf","subj":"T2645","obj":"T2646"},{"id":"R2126","pred":"themeOf","subj":"T2646","obj":"T2647"}],"text":"k, we studied mechanisms of IRF-4 gene expression silencing in leukemic cells. We analyzed the IRF-4 promoter r"}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T1047","span":{"begin":28,"end":33},"obj":"Protein"},{"id":"T1048","span":{"begin":39,"end":49},"obj":"Gene_expression"},{"id":"T1049","span":{"begin":50,"end":59},"obj":"Negative_regulation"},{"id":"T1050","span":{"begin":95,"end":100},"obj":"Protein"}],"relations":[{"id":"R768","pred":"themeOf","subj":"T1047","obj":"T1048"},{"id":"R769","pred":"themeOf","subj":"T1048","obj":"T1049"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"k, we studied mechanisms of IRF-4 gene expression silencing in leukemic cells. We analyzed the IRF-4 promoter r"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1722","span":{"begin":28,"end":33},"obj":"Q15306"},{"id":"T1723","span":{"begin":95,"end":100},"obj":"Q15306"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"k, we studied mechanisms of IRF-4 gene expression silencing in leukemic cells. We analyzed the IRF-4 promoter r"}
test2
{"project":"test2","denotations":[{"id":"T996","span":{"begin":14,"end":24},"obj":"Regulation"},{"id":"T997","span":{"begin":28,"end":33},"obj":"Protein"},{"id":"T998","span":{"begin":39,"end":49},"obj":"Gene_expression"},{"id":"T999","span":{"begin":50,"end":59},"obj":"Negative_regulation"},{"id":"T1000","span":{"begin":95,"end":100},"obj":"Protein"}],"relations":[{"id":"R742","pred":"themeOf","subj":"T997","obj":"T998"},{"id":"R743","pred":"themeOf","subj":"T998","obj":"T996"},{"id":"R744","pred":"causeOf","subj":"T999","obj":"T996"}],"text":"k, we studied mechanisms of IRF-4 gene expression silencing in leukemic cells. We analyzed the IRF-4 promoter r"}