> top > docs > PMC:1310901 > spans > 4195-4363 > annotations

PMC:1310901 / 4195-4363 JSONTXT

Annnotations TAB JSON ListView MergeView

bionlp-st-ge-2016-reference-eval

Id Subject Object Predicate Lexical cue
T2653 77-85 Regulation denotes regulate
T2654 86-96 Gene_expression denotes expression
T2655 77-85 Regulation denotes regulate
T2656 86-96 Gene_expression denotes expression
T2683 2-10 Protein denotes p16INK4a
T2684 12-17 Protein denotes BRCA1
T2685 19-24 Protein denotes CDH13
T2686 29-35 Protein denotes APAF-1
T2687 104-109 Protein denotes c-abl
T2688 115-118 Protein denotes bcr
R2074 T2654 T2653 themeOf expression,regulate
R2075 T2656 T2655 themeOf expression,regulate
R2101 T2687 T2654 themeOf c-abl,expression
R2102 T2688 T2656 themeOf bcr,expression

events-check-again

Id Subject Object Predicate Lexical cue
T2547 2-10 Protein denotes p16INK4a
T2548 12-17 Protein denotes BRCA1
T2549 19-24 Protein denotes CDH13
T2550 29-35 Protein denotes APAF-1
T2551 77-85 Regulation denotes regulate
T2552 77-85 Regulation denotes regulate
T2553 86-96 Gene_expression denotes expression
T2554 86-96 Gene_expression denotes expression
T2555 104-109 Protein denotes c-abl
T2556 115-118 Protein denotes bcr
R2038 T2553 T2552 themeOf expression,regulate
R2039 T2554 T2551 themeOf expression,regulate
R2041 T2555 T2553 themeOf c-abl,expression
R2042 T2556 T2554 themeOf bcr,expression

2_test

Id Subject Object Predicate Lexical cue
16396836-11748635-76538176 37-39 11748635 denotes 17
16396836-9041182-76538176 37-39 9041182 denotes 17
16396836-12154405-76538176 37-39 12154405 denotes 17
16396836-7938018-76538177 136-138 7938018 denotes 20
16396836-8822945-76538177 136-138 8822945 denotes 20
16396836-10068681-76538177 136-138 10068681 denotes 20
16396836-10498618-76538177 136-138 10498618 denotes 20

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1519 0-1 -COMMA- denotes ,
T1520 2-10 NN denotes p16INK4a
T1521 10-11 -COMMA- denotes ,
T1522 12-17 NN denotes BRCA1
T1523 17-18 -COMMA- denotes ,
T1524 19-24 NN denotes CDH13
T1525 25-28 CC denotes and
T1526 29-35 NN denotes APAF-1
T1527 36-37 -LRB- denotes (
T1528 37-42 CD denotes 17–19
T1529 42-43 -RRB- denotes )
T1530 45-47 IN denotes In
T1531 48-51 NN denotes CML
T1532 51-52 -COMMA- denotes ,
T1533 53-64 NN denotes methylation
T1534 65-67 VB denotes is
T1535 68-73 VB denotes known
T1536 74-76 TO denotes to
T1537 77-85 VB denotes regulate
T1538 86-96 NN denotes expression
T1539 97-99 IN denotes of
T1540 100-103 DT denotes the
T1541 104-109 NN denotes c-abl
T1542 109-110 -COMMA- denotes ,
T1543 111-114 DT denotes the
T1544 115-118 NN denotes bcr
T1545 119-123 NN denotes gene
T1546 124-127 CC denotes and
T1547 128-134 NN denotes others
T1548 135-136 -LRB- denotes (
T1549 136-141 CD denotes 20–23
T1550 141-142 -RRB- denotes )
T1551 142-143 -COMMA- denotes ,
T1552 144-147 CC denotes and
T1553 148-151 DT denotes the
T1554 152-158 NN denotes extent
T1555 159-161 IN denotes of
R1185 T1519 T1521 arg1Of ",",","
R1186 T1520 T1519 arg2Of p16INK4a,","
R1187 T1521 T1523 arg1Of ",",","
R1188 T1522 T1521 arg2Of BRCA1,","
R1189 T1523 T1525 arg1Of ",",and
R1190 T1524 T1523 arg2Of CDH13,","
R1192 T1526 T1525 arg2Of APAF-1,and
R1193 T1526 T1527 arg1Of APAF-1,(
R1194 T1528 T1527 arg2Of 17–19,(
R1195 T1529 T1527 arg3Of ),(
R1196 T1531 T1530 arg2Of CML,In
R1197 T1533 T1534 arg1Of methylation,is
R1198 T1533 T1535 arg2Of methylation,known
R1199 T1533 T1537 arg1Of methylation,regulate
R1200 T1535 T1534 arg2Of known,is
R1201 T1535 T1552 arg1Of known,and
R1202 T1537 T1535 arg3Of regulate,known
R1203 T1537 T1536 arg1Of regulate,to
R1204 T1538 T1537 arg2Of expression,regulate
R1205 T1538 T1539 arg1Of expression,of
R1206 T1541 T1540 arg1Of c-abl,the
R1207 T1541 T1542 arg1Of c-abl,","
R1208 T1542 T1546 arg1Of ",",and
R1209 T1545 T1542 arg2Of gene,","
R1210 T1545 T1543 arg1Of gene,the
R1211 T1545 T1544 arg1Of gene,bcr
R1212 T1546 T1539 arg2Of and,of
R1213 T1547 T1546 arg2Of others,and
R1214 T1547 T1548 arg1Of others,(
R1215 T1549 T1548 arg2Of 20–23,(
R1216 T1550 T1548 arg3Of ),(
R1217 T1552 T1530 arg1Of and,In
R1218 T1552 T1532 arg1Of and,","
R1219 T1552 T1551 arg1Of and,","
R1220 T1554 T1553 arg1Of extent,the
R1221 T1554 T1555 arg1Of extent,of

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2163 0-1 , denotes ,
T2164 2-10 NNP denotes p16INK4a
T2165 10-11 , denotes ,
T2166 12-17 NNP denotes BRCA1
T2167 17-18 , denotes ,
T2168 19-24 NNP denotes CDH13
T2169 25-28 CC denotes and
T2170 29-35 NNP denotes APAF-1
T2171 36-37 -LRB- denotes (
T2172 37-39 CD denotes 17
T2173 40-42 CD denotes 19
T2174 42-43 -RRB- denotes )
T2175 43-44 . denotes .
T2176 45-47 IN denotes In
T2177 48-51 NNP denotes CML
T2178 51-52 , denotes ,
T2179 53-64 NN denotes methylation
T2180 65-67 VBZ denotes is
T2181 68-73 VBN denotes known
T2182 74-76 TO denotes to
T2183 77-85 VB denotes regulate
T2184 86-96 NN denotes expression
T2185 97-99 IN denotes of
T2186 100-103 DT denotes the
T2187 104-109 NN denotes c-abl
T2188 109-110 , denotes ,
T2189 111-114 DT denotes the
T2190 115-118 NN denotes bcr
T2191 119-123 NN denotes gene
T2192 124-127 CC denotes and
T2193 128-134 NNS denotes others
T2194 135-136 -LRB- denotes (
T2195 136-138 CD denotes 20
T2196 139-141 CD denotes 23
T2197 141-142 -RRB- denotes )
T2198 142-143 , denotes ,
T2199 144-147 CC denotes and
T2200 148-151 DT denotes the
T2201 152-158 NN denotes extent
T2202 159-161 IN denotes of
R1706 T2165 T2164 punct ",",p16INK4a
R1707 T2166 T2164 conj BRCA1,p16INK4a
R1708 T2167 T2166 punct ",",BRCA1
R1709 T2168 T2166 conj CDH13,BRCA1
R1711 T2169 T2168 cc and,CDH13
R1712 T2170 T2168 conj APAF-1,CDH13
R1713 T2171 T2170 punct (,APAF-1
R1715 T2172 T2170 nummod 17,APAF-1
R1716 T2173 T2170 nummod 19,APAF-1
R1718 T2174 T2170 punct ),APAF-1
R1720 T2176 T2181 prep In,known
R1722 T2177 T2176 pobj CML,In
R1723 T2178 T2181 punct ",",known
R1724 T2179 T2181 nsubjpass methylation,known
R1726 T2180 T2181 auxpass is,known
R1727 T2181 T2181 ROOT known,known
R1728 T2182 T2183 aux to,regulate
R1730 T2183 T2181 xcomp regulate,known
R1731 T2184 T2183 dobj expression,regulate
R1732 T2185 T2184 prep of,expression
R1734 T2186 T2187 det the,c-abl
R1735 T2187 T2185 pobj c-abl,of
R1737 T2188 T2187 punct ",",c-abl
R1738 T2189 T2191 det the,gene
R1739 T2190 T2191 compound bcr,gene
R1741 T2191 T2187 conj gene,c-abl
R1742 T2192 T2191 cc and,gene
R1743 T2193 T2191 conj others,gene
R1744 T2194 T2193 punct (,others
R1746 T2195 T2193 appos 20,others
R1748 T2196 T2193 appos 23,others
R1749 T2197 T2193 punct ),others
R1750 T2198 T2181 punct ",",known
R1751 T2199 T2181 cc and,known
R1753 T2200 T2201 det the,extent
R1755 T2202 T2201 prep of,extent

GO-BP

Id Subject Object Predicate Lexical cue
T1093 53-64 http://purl.obolibrary.org/obo/GO_0032259 denotes methylation

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2616 2-10 Protein denotes p16INK4a
T2617 12-17 Protein denotes BRCA1
T2618 19-24 Protein denotes CDH13
T2619 29-35 Protein denotes APAF-1
T2620 104-109 Protein denotes c-abl
T2621 115-123 Protein denotes bcr gene
T2623 86-96 Gene_expression denotes expression
T2624 86-96 Gene_expression denotes expression
T2625 77-85 Regulation denotes regulate
T2626 77-85 Regulation denotes regulate
R2073 T2620 T2623 themeOf c-abl,expression
R2077 T2621 T2624 themeOf bcr gene,expression
R2078 T2623 T2625 themeOf expression,regulate
R2080 T2624 T2626 themeOf expression,regulate

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T1036 2-10 Protein denotes p16INK4a
T1037 12-17 Protein denotes BRCA1
T1038 19-24 Protein denotes CDH13
T1039 29-35 Protein denotes APAF-1
T1040 77-85 Regulation denotes regulate
T1041 77-85 Regulation denotes regulate
T1042 86-96 Gene_expression denotes expression
T1043 86-96 Gene_expression denotes expression
T1044 104-109 Protein denotes c-abl
T1045 115-118 Protein denotes bcr
R764 T1042 T1041 themeOf expression,regulate
R765 T1043 T1040 themeOf expression,regulate
R766 T1044 T1042 themeOf c-abl,expression
R767 T1045 T1043 themeOf bcr,expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1704 2-10 P42771 denotes p16INK4a
T1705 12-17 Q3B891 denotes BRCA1
T1706 19-24 P55290 denotes CDH13
T1707 29-35 O14727 denotes APAF-1
T1708 104-109 P00519 denotes c-abl
T1709 106-109 P00519 denotes abl
T1710 115-118 P11274 denotes bcr

test2

Id Subject Object Predicate Lexical cue
T985 2-10 Protein denotes p16INK4a
T986 12-17 Protein denotes BRCA1
T987 19-24 Protein denotes CDH13
T988 29-35 Protein denotes APAF-1
T989 77-85 Regulation denotes regulate
T990 86-96 Gene_expression denotes expression
T991 104-109 Protein denotes c-abl
T992 115-118 Protein denotes bcr
R738 T990 T989 themeOf expression,regulate
R739 T991 T990 themeOf c-abl,expression
R740 T992 T990 themeOf bcr,expression