PMC:1310901 / 4129-4239
Annnotations
bionlp-st-ge-2016-reference-eval
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2678 | 38-42 | Protein | denotes | MGMT |
T2679 | 44-48 | Protein | denotes | DAPK |
T2681 | 50-56 | Protein | denotes | p14ARF |
T2682 | 58-66 | Protein | denotes | p15INK4b |
T2683 | 68-76 | Protein | denotes | p16INK4a |
T2684 | 78-83 | Protein | denotes | BRCA1 |
T2685 | 85-90 | Protein | denotes | CDH13 |
T2686 | 95-101 | Protein | denotes | APAF-1 |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2543 | 38-42 | Protein | denotes | MGMT |
T2544 | 44-48 | Protein | denotes | DAPK |
T2545 | 50-56 | Protein | denotes | p14ARF |
T2546 | 58-66 | Protein | denotes | p15INK4b |
T2547 | 68-76 | Protein | denotes | p16INK4a |
T2548 | 78-83 | Protein | denotes | BRCA1 |
T2549 | 85-90 | Protein | denotes | CDH13 |
T2550 | 95-101 | Protein | denotes | APAF-1 |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1069 | 0-110 | Sentence | denotes | Examples for such aberrated genes are MGMT, DAPK, p14ARF, p15INK4b, p16INK4a, BRCA1, CDH13 and APAF-1 (17–19). |
T27 | 0-110 | Sentence | denotes | Examples for such aberrated genes are MGMT, DAPK, p14ARF, p15INK4b, p16INK4a, BRCA1, CDH13 and APAF-1 (17–19). |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
16396836-11748635-76538176 | 103-105 | 11748635 | denotes | 17 |
16396836-9041182-76538176 | 103-105 | 9041182 | denotes | 17 |
16396836-12154405-76538176 | 103-105 | 12154405 | denotes | 17 |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1506 | 0-8 | NN | denotes | Examples |
T1507 | 9-12 | IN | denotes | for |
T1508 | 13-17 | JJ | denotes | such |
T1509 | 18-27 | JJ | denotes | aberrated |
T1510 | 28-33 | NN | denotes | genes |
T1511 | 34-37 | VB | denotes | are |
T1512 | 38-42 | NNP | denotes | MGMT |
T1513 | 42-43 | -COMMA- | denotes | , |
T1514 | 44-48 | NNP | denotes | DAPK |
T1515 | 48-49 | -COMMA- | denotes | , |
T1516 | 50-56 | NN | denotes | p14ARF |
T1517 | 56-57 | -COMMA- | denotes | , |
T1518 | 58-66 | NN | denotes | p15INK4b |
T1519 | 66-67 | -COMMA- | denotes | , |
T1520 | 68-76 | NN | denotes | p16INK4a |
T1521 | 76-77 | -COMMA- | denotes | , |
T1522 | 78-83 | NN | denotes | BRCA1 |
T1523 | 83-84 | -COMMA- | denotes | , |
T1524 | 85-90 | NN | denotes | CDH13 |
T1525 | 91-94 | CC | denotes | and |
T1526 | 95-101 | NN | denotes | APAF-1 |
T1527 | 102-103 | -LRB- | denotes | ( |
T1528 | 103-108 | CD | denotes | 17–19 |
T1529 | 108-109 | -RRB- | denotes | ) |
R1173 | T1506 | T1507 | arg1Of | Examples,for |
R1174 | T1506 | T1511 | arg1Of | Examples,are |
R1175 | T1509 | T1508 | arg1Of | aberrated,such |
R1176 | T1510 | T1507 | arg2Of | genes,for |
R1177 | T1510 | T1509 | arg1Of | genes,aberrated |
R1178 | T1512 | T1513 | arg1Of | MGMT,"," |
R1179 | T1513 | T1515 | arg1Of | ",","," |
R1180 | T1514 | T1513 | arg2Of | DAPK,"," |
R1181 | T1515 | T1517 | arg1Of | ",","," |
R1182 | T1516 | T1515 | arg2Of | p14ARF,"," |
R1183 | T1517 | T1519 | arg1Of | ",","," |
R1184 | T1518 | T1517 | arg2Of | p15INK4b,"," |
R1185 | T1519 | T1521 | arg1Of | ",","," |
R1186 | T1520 | T1519 | arg2Of | p16INK4a,"," |
R1187 | T1521 | T1523 | arg1Of | ",","," |
R1188 | T1522 | T1521 | arg2Of | BRCA1,"," |
R1189 | T1523 | T1525 | arg1Of | ",",and |
R1190 | T1524 | T1523 | arg2Of | CDH13,"," |
R1191 | T1525 | T1511 | arg2Of | and,are |
R1192 | T1526 | T1525 | arg2Of | APAF-1,and |
R1193 | T1526 | T1527 | arg1Of | APAF-1,( |
R1194 | T1528 | T1527 | arg2Of | 17–19,( |
R1195 | T1529 | T1527 | arg3Of | ),( |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2150 | 0-8 | NNS | denotes | Examples |
T2151 | 9-12 | IN | denotes | for |
T2152 | 13-17 | JJ | denotes | such |
T2153 | 18-27 | JJ | denotes | aberrated |
T2154 | 28-33 | NNS | denotes | genes |
T2155 | 34-37 | VBP | denotes | are |
T2156 | 38-42 | NNP | denotes | MGMT |
T2157 | 42-43 | , | denotes | , |
T2158 | 44-48 | NNP | denotes | DAPK |
T2159 | 48-49 | , | denotes | , |
T2160 | 50-56 | NNP | denotes | p14ARF |
T2161 | 56-57 | , | denotes | , |
T2162 | 58-66 | NNP | denotes | p15INK4b |
T2163 | 66-67 | , | denotes | , |
T2164 | 68-76 | NNP | denotes | p16INK4a |
T2165 | 76-77 | , | denotes | , |
T2166 | 78-83 | NNP | denotes | BRCA1 |
T2167 | 83-84 | , | denotes | , |
T2168 | 85-90 | NNP | denotes | CDH13 |
T2169 | 91-94 | CC | denotes | and |
T2170 | 95-101 | NNP | denotes | APAF-1 |
T2171 | 102-103 | -LRB- | denotes | ( |
T2172 | 103-105 | CD | denotes | 17 |
T2173 | 106-108 | CD | denotes | 19 |
T2174 | 108-109 | -RRB- | denotes | ) |
T2175 | 109-110 | . | denotes | . |
R1684 | T2150 | T2155 | nsubj | Examples,are |
R1686 | T2151 | T2150 | prep | for,Examples |
R1687 | T2152 | T2154 | amod | such,genes |
R1688 | T2153 | T2154 | amod | aberrated,genes |
R1690 | T2154 | T2151 | pobj | genes,for |
R1691 | T2155 | T2155 | ROOT | are,are |
R1692 | T2156 | T2155 | attr | MGMT,are |
R1694 | T2157 | T2156 | punct | ",",MGMT |
R1696 | T2158 | T2156 | conj | DAPK,MGMT |
R1697 | T2159 | T2158 | punct | ",",DAPK |
R1698 | T2160 | T2158 | conj | p14ARF,DAPK |
R1699 | T2161 | T2160 | punct | ",",p14ARF |
R1701 | T2162 | T2160 | conj | p15INK4b,p14ARF |
R1703 | T2163 | T2162 | punct | ",",p15INK4b |
R1705 | T2164 | T2162 | conj | p16INK4a,p15INK4b |
R1706 | T2165 | T2164 | punct | ",",p16INK4a |
R1707 | T2166 | T2164 | conj | BRCA1,p16INK4a |
R1708 | T2167 | T2166 | punct | ",",BRCA1 |
R1709 | T2168 | T2166 | conj | CDH13,BRCA1 |
R1711 | T2169 | T2168 | cc | and,CDH13 |
R1712 | T2170 | T2168 | conj | APAF-1,CDH13 |
R1713 | T2171 | T2170 | punct | (,APAF-1 |
R1715 | T2172 | T2170 | nummod | 17,APAF-1 |
R1716 | T2173 | T2170 | nummod | 19,APAF-1 |
R1718 | T2174 | T2170 | punct | ),APAF-1 |
R1719 | T2175 | T2155 | punct | .,are |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1102 | 38-42 | http://purl.obolibrary.org/obo/GO_0003908 | denotes | MGMT |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2354 | 38-42 | http://purl.obolibrary.org/obo/GO_0003908 | denotes | MGMT |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2612 | 38-42 | Protein | denotes | MGMT |
T2613 | 44-48 | Protein | denotes | DAPK |
T2614 | 50-56 | Protein | denotes | p14ARF |
T2615 | 58-66 | Protein | denotes | p15INK4b |
T2616 | 68-76 | Protein | denotes | p16INK4a |
T2617 | 78-83 | Protein | denotes | BRCA1 |
T2618 | 85-90 | Protein | denotes | CDH13 |
T2619 | 95-101 | Protein | denotes | APAF-1 |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1032 | 38-42 | Protein | denotes | MGMT |
T1033 | 44-48 | Protein | denotes | DAPK |
T1034 | 50-56 | Protein | denotes | p14ARF |
T1035 | 58-66 | Protein | denotes | p15INK4b |
T1036 | 68-76 | Protein | denotes | p16INK4a |
T1037 | 78-83 | Protein | denotes | BRCA1 |
T1038 | 85-90 | Protein | denotes | CDH13 |
T1039 | 95-101 | Protein | denotes | APAF-1 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1700 | 38-42 | P16455 | denotes | MGMT |
T1701 | 44-48 | P53355 | denotes | DAPK |
T1702 | 50-56 | Q8N726 | denotes | p14ARF |
T1703 | 58-66 | P42772 | denotes | p15INK4b |
T1704 | 68-76 | P42771 | denotes | p16INK4a |
T1705 | 78-83 | Q3B891 | denotes | BRCA1 |
T1706 | 85-90 | P55290 | denotes | CDH13 |
T1707 | 95-101 | O14727 | denotes | APAF-1 |
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T981 | 38-42 | Protein | denotes | MGMT |
T982 | 44-48 | Protein | denotes | DAPK |
T983 | 50-56 | Protein | denotes | p14ARF |
T984 | 58-66 | Protein | denotes | p15INK4b |
T985 | 68-76 | Protein | denotes | p16INK4a |
T986 | 78-83 | Protein | denotes | BRCA1 |
T987 | 85-90 | Protein | denotes | CDH13 |
T988 | 95-101 | Protein | denotes | APAF-1 |